
PMC:3589482 / 38-660
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T770 | 4-16 | NNP | denotes | Constitutive |
T771 | 17-20 | CC | denotes | and |
T772 | 21-34 | JJ | denotes | LPS-Inducible |
T773 | 35-48 | NN | denotes | Transcription |
T774 | 49-51 | IN | denotes | of |
T775 | 52-58 | NNP | denotes | Murine |
T776 | 59-67 | NNP | denotes | SerpinB2 |
T856 | 579-587 | NN | denotes | promoter |
T855 | 570-578 | CD | denotes | SerpinB2 |
T854 | 556-569 | JJ | denotes | LPS-regulated |
T853 | 552-555 | DT | denotes | the |
T852 | 548-551 | VB | denotes | map |
T851 | 545-547 | TO | denotes | To |
T850 | 543-544 | . | denotes | . |
T849 | 532-543 | NNS | denotes | macrophages |
T848 | 525-531 | JJ | denotes | murine |
T847 | 522-524 | IN | denotes | in |
T846 | 518-521 | NNS | denotes | hrs |
T845 | 515-517 | CD | denotes | 24 |
T844 | 512-514 | IN | denotes | of |
T843 | 505-511 | NN | denotes | period |
T842 | 503-504 | DT | denotes | a |
T841 | 498-502 | IN | denotes | over |
T840 | 488-497 | JJ | denotes | 1000-fold |
T839 | 487-488 | CD | denotes | ∼ |
T838 | 484-486 | IN | denotes | by |
T837 | 482-483 | -RRB- | denotes | ) |
T836 | 478-482 | CD | denotes | TLR4 |
T835 | 477-478 | -LRB- | denotes | ( |
T834 | 475-476 | CD | denotes | 4 |
T833 | 466-474 | NN | denotes | receptor |
T832 | 456-465 | JJ | denotes | toll-like |
T831 | 452-455 | DT | denotes | the |
T830 | 448-451 | IN | denotes | via |
T829 | 437-447 | NN | denotes | expression |
T828 | 428-436 | NNP | denotes | SerpinB2 |
T827 | 421-427 | VB | denotes | induce |
T826 | 417-420 | MD | denotes | can |
T825 | 415-416 | , | denotes | , |
T824 | 406-415 | NN | denotes | endotoxin |
T823 | 396-405 | JJ | denotes | bacterial |
T822 | 389-395 | JJ | denotes | potent |
T821 | 387-388 | DT | denotes | a |
T820 | 385-386 | , | denotes | , |
T819 | 384-385 | -RRB- | denotes | ) |
T818 | 381-384 | NNP | denotes | LPS |
T817 | 380-381 | -LRB- | denotes | ( |
T816 | 361-379 | NNP | denotes | Lipopolysaccharide |
T815 | 359-360 | . | denotes | . |
T814 | 349-359 | NNS | denotes | activators |
T813 | 337-348 | NN | denotes | plasminogen |
T812 | 334-336 | IN | denotes | of |
T811 | 323-333 | NN | denotes | inhibition |
T810 | 319-322 | CC | denotes | and |
T809 | 317-318 | , | denotes | , |
T808 | 309-317 | NN | denotes | survival |
T807 | 298-308 | NN | denotes | macrophage |
T806 | 296-297 | , | denotes | , |
T805 | 288-296 | NN | denotes | immunity |
T804 | 281-287 | NN | denotes | innate |
T803 | 278-280 | IN | denotes | of |
T802 | 267-277 | NN | denotes | modulation |
T801 | 263-266 | DT | denotes | the |
T800 | 260-262 | TO | denotes | to |
T799 | 253-259 | VBN | denotes | linked |
T798 | 250-252 | VBZ | denotes | is |
T797 | 246-249 | CC | denotes | and |
T796 | 238-245 | NNS | denotes | stimuli |
T795 | 225-237 | JJ | denotes | inflammatory |
T794 | 222-224 | TO | denotes | to |
T793 | 213-221 | NN | denotes | response |
T792 | 210-212 | IN | denotes | in |
T791 | 198-209 | NNS | denotes | macrophages |
T790 | 195-197 | IN | denotes | in |
T789 | 187-194 | VBN | denotes | induced |
T788 | 180-186 | RB | denotes | highly |
T787 | 177-179 | VBZ | denotes | is |
T786 | 175-176 | -RRB- | denotes | ) |
T785 | 170-175 | NN | denotes | PAI-2 |
T784 | 169-170 | -LRB- | denotes | ( |
T783 | 167-168 | CD | denotes | 2 |
T782 | 162-166 | NN | denotes | type |
T781 | 152-161 | NN | denotes | inhibitor |
T780 | 142-151 | NN | denotes | activator |
T779 | 130-141 | NN | denotes | plasminogen |
T778 | 127-129 | CC | denotes | or |
T777 | 118-126 | NNP | denotes | SerpinB2 |
T861 | 612-620 | NN | denotes | reporter |
T860 | 600-611 | VBD | denotes | transfected |
T859 | 597-599 | PRP | denotes | we |
T858 | 595-596 | , | denotes | , |
T857 | 588-595 | NNS | denotes | regions |
R357 | T770 | T773 | nmod | Constitutive,Transcription |
R358 | T771 | T770 | cc | and,Constitutive |
R359 | T772 | T770 | conj | LPS-Inducible,Constitutive |
R360 | T773 | T789 | nsubjpass | Transcription,induced |
R361 | T774 | T773 | prep | of,Transcription |
R362 | T775 | T777 | compound | Murine,SerpinB2 |
R363 | T776 | T777 | compound | SerpinB2,SerpinB2 |
R364 | T777 | T774 | pobj | SerpinB2,of |
R365 | T778 | T777 | cc | or,SerpinB2 |
R366 | T779 | T773 | conj | plasminogen,Transcription |
R367 | T780 | T781 | amod | activator,inhibitor |
R368 | T781 | T782 | compound | inhibitor,type |
R369 | T782 | T773 | appos | type,Transcription |
R370 | T783 | T782 | nummod | 2,type |
R371 | T784 | T782 | punct | (,type |
R372 | T785 | T782 | appos | PAI-2,type |
R373 | T786 | T782 | punct | ),type |
R374 | T787 | T789 | auxpass | is,induced |
R375 | T788 | T789 | advmod | highly,induced |
R376 | T789 | T789 | ROOT | induced,induced |
R377 | T790 | T789 | prep | in,induced |
R378 | T791 | T790 | pobj | macrophages,in |
R379 | T792 | T789 | prep | in,induced |
R380 | T793 | T792 | pobj | response,in |
R381 | T794 | T793 | prep | to,response |
R382 | T795 | T796 | amod | inflammatory,stimuli |
R383 | T796 | T794 | pobj | stimuli,to |
R384 | T797 | T789 | cc | and,induced |
R385 | T798 | T799 | auxpass | is,linked |
R386 | T799 | T789 | conj | linked,induced |
R387 | T800 | T799 | prep | to,linked |
R388 | T801 | T802 | det | the,modulation |
R389 | T802 | T800 | pobj | modulation,to |
R390 | T803 | T802 | prep | of,modulation |
R391 | T804 | T805 | amod | innate,immunity |
R392 | T805 | T803 | pobj | immunity,of |
R393 | T806 | T802 | punct | ",",modulation |
R394 | T807 | T808 | compound | macrophage,survival |
R395 | T808 | T802 | conj | survival,modulation |
R396 | T809 | T808 | punct | ",",survival |
R397 | T810 | T808 | cc | and,survival |
R398 | T811 | T808 | conj | inhibition,survival |
R399 | T812 | T811 | prep | of,inhibition |
R400 | T813 | T814 | compound | plasminogen,activators |
R401 | T814 | T812 | pobj | activators,of |
R402 | T815 | T789 | punct | .,induced |
R403 | T816 | T827 | npadvmod | Lipopolysaccharide,induce |
R404 | T817 | T818 | punct | (,LPS |
R405 | T818 | T816 | appos | LPS,Lipopolysaccharide |
R406 | T819 | T816 | punct | ),Lipopolysaccharide |
R407 | T820 | T816 | punct | ",",Lipopolysaccharide |
R408 | T821 | T824 | det | a,endotoxin |
R409 | T822 | T824 | amod | potent,endotoxin |
R410 | T823 | T824 | amod | bacterial,endotoxin |
R411 | T824 | T816 | appos | endotoxin,Lipopolysaccharide |
R412 | T825 | T827 | punct | ",",induce |
R413 | T826 | T827 | aux | can,induce |
R414 | T827 | T827 | ROOT | induce,induce |
R415 | T828 | T829 | compound | SerpinB2,expression |
R416 | T829 | T827 | dobj | expression,induce |
R417 | T830 | T827 | prep | via,induce |
R418 | T831 | T833 | det | the,receptor |
R419 | T832 | T833 | amod | toll-like,receptor |
R420 | T833 | T830 | pobj | receptor,via |
R421 | T834 | T833 | nummod | 4,receptor |
R422 | T835 | T833 | punct | (,receptor |
R423 | T836 | T833 | appos | TLR4,receptor |
R424 | T837 | T833 | punct | ),receptor |
R425 | T838 | T827 | prep | by,induce |
R426 | T839 | T838 | pobj | ∼,by |
R427 | T840 | T827 | advcl | 1000-fold,induce |
R428 | T841 | T840 | prep | over,1000-fold |
R429 | T842 | T843 | det | a,period |
R430 | T843 | T841 | pobj | period,over |
R431 | T844 | T843 | prep | of,period |
R432 | T845 | T846 | nummod | 24,hrs |
R433 | T846 | T844 | pobj | hrs,of |
R434 | T847 | T846 | prep | in,hrs |
R435 | T848 | T849 | amod | murine,macrophages |
R436 | T849 | T847 | pobj | macrophages,in |
R437 | T850 | T827 | punct | .,induce |
R438 | T851 | T852 | aux | To,map |
R439 | T852 | T860 | advcl | map,transfected |
R440 | T853 | T857 | det | the,regions |
R441 | T854 | T857 | amod | LPS-regulated,regions |
R442 | T855 | T857 | nummod | SerpinB2,regions |
R443 | T856 | T857 | compound | promoter,regions |
R444 | T857 | T852 | dobj | regions,map |
R445 | T858 | T860 | punct | ",",transfected |
R446 | T859 | T860 | nsubj | we,transfected |
R447 | T860 | T860 | ROOT | transfected,transfected |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T239 | 52-58 | NNP | denotes | Murine |
T240 | 59-67 | NN | denotes | SerpinB2 |
T267 | 278-280 | IN | denotes | of |
T266 | 267-277 | NN | denotes | modulation |
T265 | 263-266 | DT | denotes | the |
T264 | 260-262 | TO | denotes | to |
T263 | 253-259 | VB | denotes | linked |
T262 | 250-252 | VB | denotes | is |
T261 | 246-249 | CC | denotes | and |
T260 | 238-245 | NN | denotes | stimuli |
T259 | 225-237 | JJ | denotes | inflammatory |
T258 | 222-224 | TO | denotes | to |
T257 | 213-221 | NN | denotes | response |
T256 | 210-212 | IN | denotes | in |
T255 | 198-209 | NN | denotes | macrophages |
T254 | 195-197 | IN | denotes | in |
T253 | 187-194 | VB | denotes | induced |
T252 | 180-186 | RB | denotes | highly |
T251 | 177-179 | VB | denotes | is |
T250 | 175-176 | -RRB- | denotes | ) |
T249 | 170-175 | NN | denotes | PAI-2 |
T248 | 169-170 | -LRB- | denotes | ( |
T247 | 167-168 | CD | denotes | 2 |
T246 | 162-166 | NN | denotes | type |
T245 | 152-161 | NN | denotes | inhibitor |
T244 | 142-151 | NN | denotes | activator |
T243 | 130-141 | NN | denotes | plasminogen |
T242 | 127-129 | CC | denotes | or |
T241 | 118-126 | NN | denotes | SerpinB2 |
T307 | 515-517 | CD | denotes | 24 |
T306 | 512-514 | IN | denotes | of |
T305 | 505-511 | NN | denotes | period |
T304 | 503-504 | DT | denotes | a |
T303 | 498-502 | IN | denotes | over |
T302 | 487-497 | RB | denotes | ∼1000-fold |
T301 | 484-486 | IN | denotes | by |
T300 | 482-483 | -RRB- | denotes | ) |
T299 | 478-482 | NN | denotes | TLR4 |
T298 | 477-478 | -LRB- | denotes | ( |
T297 | 475-476 | CD | denotes | 4 |
T296 | 466-474 | NN | denotes | receptor |
T295 | 456-465 | JJ | denotes | toll-like |
T294 | 452-455 | DT | denotes | the |
T293 | 448-451 | IN | denotes | via |
T292 | 437-447 | NN | denotes | expression |
T291 | 428-436 | NN | denotes | SerpinB2 |
T290 | 421-427 | VB | denotes | induce |
T289 | 417-420 | MD | denotes | can |
T288 | 415-416 | -COMMA- | denotes | , |
T287 | 406-415 | NN | denotes | endotoxin |
T286 | 396-405 | JJ | denotes | bacterial |
T285 | 389-395 | JJ | denotes | potent |
T284 | 387-388 | DT | denotes | a |
T283 | 385-386 | -COMMA- | denotes | , |
T282 | 384-385 | -RRB- | denotes | ) |
T281 | 381-384 | NN | denotes | LPS |
T280 | 380-381 | -LRB- | denotes | ( |
T279 | 361-379 | NN | denotes | Lipopolysaccharide |
T278 | 349-359 | NN | denotes | activators |
T277 | 337-348 | NN | denotes | plasminogen |
T276 | 334-336 | IN | denotes | of |
T275 | 323-333 | NN | denotes | inhibition |
T274 | 319-322 | CC | denotes | and |
T273 | 317-318 | -COMMA- | denotes | , |
T272 | 309-317 | NN | denotes | survival |
T271 | 298-308 | NN | denotes | macrophage |
T270 | 296-297 | -COMMA- | denotes | , |
T269 | 288-296 | NN | denotes | immunity |
T268 | 281-287 | JJ | denotes | innate |
T322 | 612-620 | NN | denotes | reporter |
T321 | 600-611 | VB | denotes | transfected |
T320 | 597-599 | PRP | denotes | we |
T319 | 595-596 | -COMMA- | denotes | , |
T318 | 588-595 | NN | denotes | regions |
T317 | 579-587 | NN | denotes | promoter |
T316 | 570-578 | NN | denotes | SerpinB2 |
T315 | 556-569 | JJ | denotes | LPS-regulated |
T314 | 552-555 | DT | denotes | the |
T313 | 548-551 | VB | denotes | map |
T312 | 545-547 | TO | denotes | To |
T311 | 532-543 | NN | denotes | macrophages |
T310 | 525-531 | JJ | denotes | murine |
T309 | 522-524 | IN | denotes | in |
T308 | 518-521 | NN | denotes | hrs |
T234 | 4-16 | NNP | denotes | Constitutive |
T235 | 17-20 | CC | denotes | and |
T236 | 21-34 | JJ | denotes | LPS-Inducible |
T237 | 35-48 | NN | denotes | Transcription |
T238 | 49-51 | IN | denotes | of |
R47 | T240 | T238 | arg2Of | SerpinB2,of |
R48 | T240 | T239 | arg1Of | SerpinB2,Murine |
R49 | T241 | T242 | arg1Of | SerpinB2,or |
R50 | T243 | T242 | arg2Of | plasminogen,or |
R51 | T246 | T241 | arg1Of | type,SerpinB2 |
R52 | T246 | T243 | arg1Of | type,plasminogen |
R53 | T246 | T244 | arg1Of | type,activator |
R54 | T246 | T245 | arg1Of | type,inhibitor |
R55 | T246 | T247 | arg1Of | type,2 |
R56 | T246 | T248 | arg1Of | type,( |
R57 | T246 | T251 | arg1Of | type,is |
R58 | T246 | T253 | arg2Of | type,induced |
R59 | T246 | T262 | arg1Of | type,is |
R60 | T246 | T263 | arg2Of | type,linked |
R61 | T249 | T248 | arg2Of | PAI-2,( |
R62 | T250 | T248 | arg3Of | ),( |
R63 | T253 | T251 | arg2Of | induced,is |
R64 | T253 | T252 | arg1Of | induced,highly |
R65 | T253 | T254 | arg1Of | induced,in |
R66 | T253 | T256 | arg1Of | induced,in |
R67 | T253 | T261 | arg1Of | induced,and |
R68 | T255 | T254 | arg2Of | macrophages,in |
R69 | T257 | T256 | arg2Of | response,in |
R70 | T257 | T258 | arg1Of | response,to |
R71 | T260 | T258 | arg2Of | stimuli,to |
R72 | T260 | T259 | arg1Of | stimuli,inflammatory |
R73 | T263 | T261 | arg2Of | linked,and |
R74 | T263 | T262 | arg2Of | linked,is |
R75 | T263 | T264 | arg1Of | linked,to |
R76 | T266 | T264 | arg2Of | modulation,to |
R77 | T266 | T265 | arg1Of | modulation,the |
R78 | T266 | T267 | arg1Of | modulation,of |
R79 | T269 | T268 | arg1Of | immunity,innate |
R80 | T269 | T270 | arg1Of | immunity,"," |
R81 | T270 | T274 | arg1Of | ",",and |
R82 | T272 | T270 | arg2Of | survival,"," |
R83 | T272 | T271 | arg1Of | survival,macrophage |
R84 | T274 | T267 | arg2Of | and,of |
R85 | T274 | T273 | arg1Of | and,"," |
R86 | T275 | T274 | arg2Of | inhibition,and |
R87 | T275 | T276 | arg1Of | inhibition,of |
R88 | T278 | T276 | arg2Of | activators,of |
R89 | T278 | T277 | arg1Of | activators,plasminogen |
R90 | T279 | T280 | arg1Of | Lipopolysaccharide,( |
R91 | T279 | T283 | arg1Of | Lipopolysaccharide,"," |
R92 | T279 | T289 | arg1Of | Lipopolysaccharide,can |
R93 | T279 | T290 | arg1Of | Lipopolysaccharide,induce |
R94 | T281 | T280 | arg2Of | LPS,( |
R95 | T282 | T280 | arg3Of | ),( |
R96 | T287 | T283 | arg2Of | endotoxin,"," |
R97 | T287 | T284 | arg1Of | endotoxin,a |
R98 | T287 | T285 | arg1Of | endotoxin,potent |
R99 | T287 | T286 | arg1Of | endotoxin,bacterial |
R100 | T290 | T288 | arg1Of | induce,"," |
R101 | T290 | T289 | arg2Of | induce,can |
R102 | T290 | T293 | arg1Of | induce,via |
R103 | T290 | T301 | arg1Of | induce,by |
R104 | T290 | T303 | arg1Of | induce,over |
R105 | T292 | T290 | arg2Of | expression,induce |
R106 | T292 | T291 | arg1Of | expression,SerpinB2 |
R107 | T296 | T293 | arg2Of | receptor,via |
R108 | T296 | T294 | arg1Of | receptor,the |
R109 | T296 | T295 | arg1Of | receptor,toll-like |
R110 | T296 | T297 | arg1Of | receptor,4 |
R111 | T296 | T298 | arg1Of | receptor,( |
R112 | T299 | T298 | arg2Of | TLR4,( |
R113 | T300 | T298 | arg3Of | ),( |
R114 | T302 | T301 | arg2Of | ∼1000-fold,by |
R115 | T305 | T303 | arg2Of | period,over |
R116 | T305 | T304 | arg1Of | period,a |
R117 | T305 | T306 | arg1Of | period,of |
R118 | T305 | T309 | arg1Of | period,in |
R119 | T308 | T306 | arg2Of | hrs,of |
R120 | T308 | T307 | arg1Of | hrs,24 |
R121 | T311 | T309 | arg2Of | macrophages,in |
R122 | T311 | T310 | arg1Of | macrophages,murine |
R123 | T313 | T312 | arg1Of | map,To |
R124 | T318 | T313 | arg2Of | regions,map |
R125 | T318 | T314 | arg1Of | regions,the |
R126 | T318 | T315 | arg1Of | regions,LPS-regulated |
R127 | T318 | T316 | arg1Of | regions,SerpinB2 |
R128 | T318 | T317 | arg1Of | regions,promoter |
R129 | T320 | T313 | arg1Of | we,map |
R130 | T320 | T321 | arg1Of | we,transfected |
R131 | T321 | T312 | modOf | transfected,To |
R132 | T321 | T319 | arg1Of | transfected,"," |
R670 | T234 | T235 | arg1Of | Constitutive,and |
R671 | T236 | T235 | arg2Of | LPS-Inducible,and |
R673 | T237 | T234 | arg1Of | Transcription,Constitutive |
R674 | T237 | T236 | arg1Of | Transcription,LPS-Inducible |
R675 | T237 | T238 | arg1Of | Transcription,of |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T158 | 59-67 | Protein | denotes | SerpinB2 |
T159 | 118-126 | Protein | denotes | SerpinB2 |
T160 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T161 | 170-175 | Protein | denotes | PAI-2 |
T162 | 428-436 | Protein | denotes | SerpinB2 |
T163 | 456-476 | Protein | denotes | toll-like receptor 4 |
T164 | 478-482 | Protein | denotes | TLR4 |
T165 | 570-578 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T539 | 478-482 | http://www.uniprot.org/uniprot/O00206 | denotes | TLR4 |
T530 | 118-126 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T531 | 428-436 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T532 | 570-578 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T537 | 167-173 | http://www.uniprot.org/uniprot/P05120 | denotes | 2 (PAI |
T529 | 59-67 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T177 | 35-48 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | Transcription |
T183 | 323-359 | http://purl.obolibrary.org/obo/GO_0010757 | denotes | inhibition of plasminogen activators |
T182 | 281-296 | http://purl.obolibrary.org/obo/GO_0045087 | denotes | innate immunity |
T180 | 213-237 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | response to inflammatory |
T179 | 337-359 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activators |
T178 | 130-151 | http://purl.obolibrary.org/obo/GO_0031639 | denotes | plasminogen activator |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T100 | 118-360 | Sentence | denotes | SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stimuli and is linked to the modulation of innate immunity, macrophage survival, and inhibition of plasminogen activators. |
T101 | 361-544 | Sentence | denotes | Lipopolysaccharide (LPS), a potent bacterial endotoxin, can induce SerpinB2 expression via the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. |
T2 | 68-107 | Sentence | denotes | C/EBP-β Mediates SerpinB2 Transcription |
T3 | 109-117 | Sentence | denotes | Abstract |
T4 | 118-360 | Sentence | denotes | SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) is highly induced in macrophages in response to inflammatory stimuli and is linked to the modulation of innate immunity, macrophage survival, and inhibition of plasminogen activators. |
T5 | 361-544 | Sentence | denotes | Lipopolysaccharide (LPS), a potent bacterial endotoxin, can induce SerpinB2 expression via the toll-like receptor 4 (TLR4) by ∼1000-fold over a period of 24 hrs in murine macrophages. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T212 | 118-126 | Protein | denotes | SerpinB2 |
T213 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T214 | 170-175 | Protein | denotes | PAI-2 |
T215 | 428-436 | Protein | denotes | SerpinB2 |
T216 | 456-476 | Protein | denotes | toll-like receptor 4 |
T217 | 478-482 | Protein | denotes | TLR4 |
T218 | 570-578 | Protein | denotes | SerpinB2 |
T211 | 59-67 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T510 | 21-34 | Positive_regulation | denotes | LPS-Inducible |
T511 | 35-48 | Transcription | denotes | Transcription |
T514 | 421-427 | Positive_regulation | denotes | induce |
T513 | 437-447 | Gene_expression | denotes | expression |
T512 | 187-194 | Positive_regulation | denotes | induced |
T500 | 570-578 | Protein | denotes | SerpinB2 |
T498 | 478-482 | Protein | denotes | TLR4 |
T492 | 59-67 | Protein | denotes | SerpinB2 |
T493 | 118-126 | Protein | denotes | SerpinB2 |
T494 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T495 | 170-175 | Protein | denotes | PAI-2 |
T496 | 428-436 | Protein | denotes | SerpinB2 |
T497 | 456-476 | Protein | denotes | toll-like receptor 4 |
R307 | T511 | T510 | themeOf | Transcription,LPS-Inducible |
R308 | T513 | T514 | themeOf | expression,induce |
R676 | T492 | T511 | themeOf | SerpinB2,Transcription |
R677 | T493 | T512 | themeOf | SerpinB2,induced |
R678 | T494 | T512 | themeOf | plasminogen activator inhibitor type 2,induced |
R679 | T495 | T512 | themeOf | PAI-2,induced |
R680 | T496 | T513 | themeOf | SerpinB2,expression |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T602 | 59-67 | Protein | denotes | SerpinB2 |
T620 | 35-48 | Transcription | denotes | Transcription |
T603 | 118-126 | Protein | denotes | SerpinB2 |
T604 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T605 | 170-175 | Protein | denotes | PAI-2 |
T606 | 428-436 | Protein | denotes | SerpinB2 |
T607 | 456-476 | Protein | denotes | toll-like receptor 4 |
T608 | 478-482 | Protein | denotes | TLR4 |
T610 | 570-578 | Protein | denotes | SerpinB2 |
T622 | 187-194 | Positive_regulation | denotes | induced |
T623 | 437-447 | Gene_expression | denotes | expression |
T624 | 421-427 | Positive_regulation | denotes | induce |
R715 | T602 | T620 | themeOf | SerpinB2,Transcription |
R717 | T604 | T622 | themeOf | plasminogen activator inhibitor type 2,induced |
R718 | T606 | T623 | themeOf | SerpinB2,expression |
R720 | T607 | T624 | causeOf | toll-like receptor 4,induce |
R733 | T623 | T624 | themeOf | expression,induce |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T568 | 59-67 | Protein | denotes | SerpinB2 |
T586 | 35-48 | Transcription | denotes | Transcription |
T588 | 21-34 | Positive_regulation | denotes | LPS-Inducible |
T569 | 118-126 | Protein | denotes | SerpinB2 |
T570 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T571 | 170-175 | Protein | denotes | PAI-2 |
T572 | 428-436 | Protein | denotes | SerpinB2 |
T573 | 456-476 | Protein | denotes | toll-like receptor 4 |
T574 | 478-482 | Protein | denotes | TLR4 |
T576 | 570-578 | Protein | denotes | SerpinB2 |
T589 | 187-194 | Positive_regulation | denotes | induced |
T590 | 437-447 | Gene_expression | denotes | expression |
T591 | 421-427 | Positive_regulation | denotes | induce |
R684 | T570 | T589 | themeOf | plasminogen activator inhibitor type 2,induced |
R682 | T568 | T586 | themeOf | SerpinB2,Transcription |
R683 | T569 | T589 | themeOf | SerpinB2,induced |
R685 | T572 | T590 | themeOf | SerpinB2,expression |
R686 | T573 | T591 | causeOf | toll-like receptor 4,induce |
R692 | T586 | T588 | themeOf | Transcription,LPS-Inducible |
R693 | T590 | T591 | themeOf | expression,induce |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T749 | 49-67 | Protein | denotes | of Murine SerpinB2 |
T758 | 21-67 | Transcription | denotes | LPS-Inducible Transcription of Murine SerpinB2 |
T760 | 515-543 | Localization | denotes | 24 hrs in murine macrophages |
T759 | 428-447 | Gene_expression | denotes | SerpinB2 expression |
T750 | 381-384 | Entity | denotes | LPS |
T748 | 428-436 | Protein | denotes | SerpinB2 |
T705 | 298-308 | Entity | denotes | macrophage |
T709 | 361-386 | Entity | denotes | Lipopolysaccharide (LPS), |
T711 | 406-415 | Entity | denotes | endotoxin |
T714 | 452-483 | Protein | denotes | the toll-like receptor 4 (TLR4) |
T715 | 478-482 | Protein | denotes | TLR4 |
T719 | 515-543 | Protein | denotes | 24 hrs in murine macrophages |
T720 | 570-578 | Protein | denotes | SerpinB2 |
T723 | 198-209 | Entity | denotes | macrophages |
T724 | 525-543 | Entity | denotes | murine macrophages |
T729 | 552-596 | Entity | denotes | the LPS-regulated SerpinB2 promoter regions, |
T733 | 334-359 | Entity | denotes | of plasminogen activators |
T739 | 170-175 | Protein | denotes | PAI-2 |
T740 | 118-176 | Protein | denotes | SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2) |
T741 | 556-569 | Entity | denotes | LPS-regulated |
T744 | 130-176 | Protein | denotes | plasminogen activator inhibitor type 2 (PAI-2) |
T745 | 337-348 | Protein | denotes | plasminogen |
R348 | T748 | T759 | themeOf | SerpinB2,SerpinB2 expression |
R349 | T749 | T758 | themeOf | of Murine SerpinB2,LPS-Inducible Transcription of Murine SerpinB2 |
R721 | T719 | T760 | themeOf | 24 hrs in murine macrophages,24 hrs in murine macrophages |
R723 | T724 | T760 | locationOf | murine macrophages,24 hrs in murine macrophages |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T648 | 570-587 | Protein | denotes | SerpinB2 promoter |
T647 | 421-427 | Positive_regulation | denotes | induce |
T646 | 437-447 | Gene_expression | denotes | expression |
T645 | 428-436 | Protein | denotes | SerpinB2 |
T644 | 323-333 | Negative_regulation | denotes | inhibition |
T643 | 187-194 | Positive_regulation | denotes | induced |
T642 | 187-194 | Positive_regulation | denotes | induced |
T641 | 337-359 | Protein | denotes | plasminogen activators |
T640 | 170-175 | Protein | denotes | PAI-2 |
T636 | 52-67 | Protein | denotes | Murine SerpinB2 |
T637 | 35-48 | Transcription | denotes | Transcription |
T639 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
R322 | T640 | T643 | themeOf | PAI-2,induced |
R323 | T641 | T644 | themeOf | plasminogen activators,inhibition |
R324 | T645 | T646 | themeOf | SerpinB2,expression |
R325 | T646 | T647 | themeOf | expression,induce |
R704 | T636 | T637 | themeOf | Murine SerpinB2,Transcription |
R706 | T639 | T642 | themeOf | plasminogen activator inhibitor type 2,induced |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21 | 59-67 | Protein | denotes | SerpinB2 |
T40 | 437-447 | Gene_expression | denotes | expression |
T39 | 421-427 | Positive_regulation | denotes | induce |
T28 | 570-578 | Protein | denotes | SerpinB2 |
T27 | 478-482 | Protein | denotes | TLR4 |
T26 | 456-476 | Protein | denotes | toll-like receptor 4 |
T25 | 428-436 | Protein | denotes | SerpinB2 |
T24 | 170-175 | Protein | denotes | PAI-2 |
T23 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T22 | 118-126 | Protein | denotes | SerpinB2 |
R3 | T27 | T26 | equivalentTo | TLR4,toll-like receptor 4 |
R8 | T40 | T39 | themeOf | expression,induce |
R1 | T24 | T23 | equivalentTo | PAI-2,plasminogen activator inhibitor type 2 |
R2 | T25 | T40 | themeOf | SerpinB2,expression |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T50 | 59-67 | Protein | denotes | SerpinB2 |
T69 | 59-67 | Protein | denotes | SerpinB2 |
T79 | 570-578 | Protein | denotes | SerpinB2 |
T78 | 478-482 | Protein | denotes | TLR4 |
T77 | 456-476 | Protein | denotes | toll-like receptor 4 |
T76 | 437-447 | Gene_expression | denotes | expression |
T75 | 428-436 | Protein | denotes | SerpinB2 |
T74 | 421-427 | Positive_regulation | denotes | induce |
T73 | 187-194 | Positive_regulation | denotes | induced |
T72 | 170-175 | Protein | denotes | PAI-2 |
T71 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T70 | 118-126 | Protein | denotes | SerpinB2 |
T57 | 570-578 | Protein | denotes | SerpinB2 |
T56 | 478-482 | Protein | denotes | TLR4 |
T55 | 456-476 | Protein | denotes | toll-like receptor 4 |
T54 | 428-436 | Protein | denotes | SerpinB2 |
T53 | 170-175 | Protein | denotes | PAI-2 |
T52 | 130-168 | Protein | denotes | plasminogen activator inhibitor type 2 |
T51 | 118-126 | Protein | denotes | SerpinB2 |
R15 | T71 | T73 | themeOf | plasminogen activator inhibitor type 2,induced |
R16 | T72 | T71 | equivalentTo | PAI-2,plasminogen activator inhibitor type 2 |
R17 | T75 | T76 | themeOf | SerpinB2,expression |
R18 | T76 | T74 | themeOf | expression,induce |
R19 | T78 | T77 | equivalentTo | TLR4,toll-like receptor 4 |