PMC:3589482 / 35152-35341 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T25813","span":{"begin":188,"end":189},"obj":"."},{"id":"T25812","span":{"begin":187,"end":188},"obj":"-RRB-"},{"id":"T25811","span":{"begin":183,"end":187},"obj":"CD"},{"id":"T25810","span":{"begin":182,"end":183},"obj":"-LRB-"},{"id":"T25809","span":{"begin":180,"end":181},"obj":"NN"},{"id":"T25808","span":{"begin":179,"end":180},"obj":":"},{"id":"T25807","span":{"begin":172,"end":179},"obj":"NN"},{"id":"T25806","span":{"begin":169,"end":171},"obj":"CC"},{"id":"T25805","span":{"begin":167,"end":168},"obj":"NN"},{"id":"T25804","span":{"begin":166,"end":167},"obj":":"},{"id":"T25803","span":{"begin":161,"end":166},"obj":"NNP"},{"id":"T25802","span":{"begin":153,"end":160},"obj":"IN"},{"id":"T25801","span":{"begin":142,"end":152},"obj":"NNS"},{"id":"T25800","span":{"begin":136,"end":141},"obj":"VBG"},{"id":"T25799","span":{"begin":126,"end":135},"obj":"VBN"},{"id":"T25798","span":{"begin":106,"end":125},"obj":"NN"},{"id":"T25797","span":{"begin":96,"end":105},"obj":"NN"},{"id":"T25796","span":{"begin":92,"end":95},"obj":"CC"},{"id":"T25795","span":{"begin":86,"end":91},"obj":"NNS"},{"id":"T25794","span":{"begin":76,"end":85},"obj":"JJ"},{"id":"T25793","span":{"begin":72,"end":75},"obj":"DT"},{"id":"T25792","span":{"begin":68,"end":71},"obj":"IN"},{"id":"T25791","span":{"begin":64,"end":67},"obj":"NNP"},{"id":"T25790","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T25789","span":{"begin":53,"end":60},"obj":"NN"},{"id":"T25788","span":{"begin":50,"end":52},"obj":"CC"},{"id":"T25787","span":{"begin":41,"end":49},"obj":"NN"},{"id":"T25786","span":{"begin":37,"end":40},"obj":"DT"},{"id":"T25785","span":{"begin":34,"end":36},"obj":"IN"},{"id":"T25784","span":{"begin":26,"end":33},"obj":"VBN"},{"id":"T25783","span":{"begin":21,"end":25},"obj":"VBD"},{"id":"T25782","span":{"begin":9,"end":20},"obj":"NNS"},{"id":"T25780","span":{"begin":0,"end":6},"obj":"CD"},{"id":"T25781","span":{"begin":6,"end":8},"obj":"CD"}],"relations":[{"id":"R18379","pred":"nummod","subj":"T25780","obj":"T25782"},{"id":"R18380","pred":"nummod","subj":"T25781","obj":"T25782"},{"id":"R18381","pred":"nsubjpass","subj":"T25782","obj":"T25784"},{"id":"R18382","pred":"auxpass","subj":"T25783","obj":"T25784"},{"id":"R18383","pred":"ROOT","subj":"T25784","obj":"T25784"},{"id":"R18384","pred":"prep","subj":"T25785","obj":"T25784"},{"id":"R18385","pred":"det","subj":"T25786","obj":"T25787"},{"id":"R18386","pred":"pobj","subj":"T25787","obj":"T25785"},{"id":"R18387","pred":"cc","subj":"T25788","obj":"T25787"},{"id":"R18388","pred":"conj","subj":"T25789","obj":"T25787"},{"id":"R18389","pred":"prep","subj":"T25790","obj":"T25789"},{"id":"R18390","pred":"pobj","subj":"T25791","obj":"T25790"},{"id":"R18391","pred":"prep","subj":"T25792","obj":"T25784"},{"id":"R18392","pred":"det","subj":"T25793","obj":"T25795"},{"id":"R18393","pred":"amod","subj":"T25794","obj":"T25795"},{"id":"R18394","pred":"pobj","subj":"T25795","obj":"T25792"},{"id":"R18395","pred":"cc","subj":"T25796","obj":"T25795"},{"id":"R18396","pred":"compound","subj":"T25797","obj":"T25798"},{"id":"R18397","pred":"nsubj","subj":"T25798","obj":"T25799"},{"id":"R18398","pred":"advcl","subj":"T25799","obj":"T25784"},{"id":"R18399","pred":"advcl","subj":"T25800","obj":"T25799"},{"id":"R18400","pred":"dobj","subj":"T25801","obj":"T25800"},{"id":"R18401","pred":"prep","subj":"T25802","obj":"T25800"},{"id":"R18402","pred":"pobj","subj":"T25803","obj":"T25802"},{"id":"R18403","pred":"punct","subj":"T25804","obj":"T25805"},{"id":"R18404","pred":"conj","subj":"T25805","obj":"T25800"},{"id":"R18405","pred":"cc","subj":"T25806","obj":"T25805"},{"id":"R18406","pred":"conj","subj":"T25807","obj":"T25805"},{"id":"R18407","pred":"punct","subj":"T25808","obj":"T25809"},{"id":"R18408","pred":"appos","subj":"T25809","obj":"T25805"},{"id":"R18409","pred":"punct","subj":"T25810","obj":"T25809"},{"id":"R18410","pred":"appos","subj":"T25811","obj":"T25809"},{"id":"R18411","pred":"punct","subj":"T25812","obj":"T25809"},{"id":"R18412","pred":"punct","subj":"T25813","obj":"T25784"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T25454","span":{"begin":187,"end":188},"obj":"-RRB-"},{"id":"T25453","span":{"begin":183,"end":187},"obj":"NN"},{"id":"T25452","span":{"begin":182,"end":183},"obj":"-LRB-"},{"id":"T25451","span":{"begin":172,"end":181},"obj":"NN"},{"id":"T25450","span":{"begin":169,"end":171},"obj":"CC"},{"id":"T25449","span":{"begin":161,"end":168},"obj":"NN"},{"id":"T25448","span":{"begin":153,"end":160},"obj":"IN"},{"id":"T25447","span":{"begin":142,"end":152},"obj":"NN"},{"id":"T25446","span":{"begin":136,"end":141},"obj":"VB"},{"id":"T25445","span":{"begin":126,"end":135},"obj":"VB"},{"id":"T25444","span":{"begin":106,"end":125},"obj":"NN"},{"id":"T25443","span":{"begin":96,"end":105},"obj":"NN"},{"id":"T25442","span":{"begin":92,"end":95},"obj":"CC"},{"id":"T25441","span":{"begin":86,"end":91},"obj":"NN"},{"id":"T25440","span":{"begin":76,"end":85},"obj":"VB"},{"id":"T25439","span":{"begin":72,"end":75},"obj":"DT"},{"id":"T25438","span":{"begin":68,"end":71},"obj":"IN"},{"id":"T25437","span":{"begin":64,"end":67},"obj":"NN"},{"id":"T25436","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T25435","span":{"begin":53,"end":60},"obj":"NN"},{"id":"T25434","span":{"begin":50,"end":52},"obj":"CC"},{"id":"T25433","span":{"begin":41,"end":49},"obj":"NN"},{"id":"T25432","span":{"begin":37,"end":40},"obj":"DT"},{"id":"T25431","span":{"begin":34,"end":36},"obj":"IN"},{"id":"T25430","span":{"begin":26,"end":33},"obj":"VB"},{"id":"T25429","span":{"begin":21,"end":25},"obj":"VB"},{"id":"T25428","span":{"begin":9,"end":20},"obj":"NN"},{"id":"T25427","span":{"begin":0,"end":8},"obj":"NN"}],"relations":[{"id":"R18168","pred":"arg1Of","subj":"T25428","obj":"T25427"},{"id":"R18169","pred":"arg1Of","subj":"T25428","obj":"T25429"},{"id":"R18170","pred":"arg2Of","subj":"T25428","obj":"T25430"},{"id":"R18171","pred":"arg2Of","subj":"T25430","obj":"T25429"},{"id":"R18172","pred":"arg1Of","subj":"T25430","obj":"T25431"},{"id":"R18173","pred":"modOf","subj":"T25430","obj":"T25446"},{"id":"R18174","pred":"arg1Of","subj":"T25433","obj":"T25434"},{"id":"R18175","pred":"arg2Of","subj":"T25434","obj":"T25431"},{"id":"R18176","pred":"arg1Of","subj":"T25434","obj":"T25432"},{"id":"R18177","pred":"arg1Of","subj":"T25434","obj":"T25436"},{"id":"R18178","pred":"arg1Of","subj":"T25434","obj":"T25438"},{"id":"R18179","pred":"arg2Of","subj":"T25435","obj":"T25434"},{"id":"R18180","pred":"arg2Of","subj":"T25437","obj":"T25436"},{"id":"R18181","pred":"arg1Of","subj":"T25441","obj":"T25442"},{"id":"R18182","pred":"arg2Of","subj":"T25443","obj":"T25442"},{"id":"R18183","pred":"arg2Of","subj":"T25444","obj":"T25438"},{"id":"R18184","pred":"arg1Of","subj":"T25444","obj":"T25439"},{"id":"R18185","pred":"arg2Of","subj":"T25444","obj":"T25440"},{"id":"R18186","pred":"arg1Of","subj":"T25444","obj":"T25441"},{"id":"R18187","pred":"arg1Of","subj":"T25444","obj":"T25443"},{"id":"R18188","pred":"arg2Of","subj":"T25444","obj":"T25445"},{"id":"R18189","pred":"arg1Of","subj":"T25446","obj":"T25448"},{"id":"R18190","pred":"arg2Of","subj":"T25447","obj":"T25446"},{"id":"R18191","pred":"arg1Of","subj":"T25449","obj":"T25450"},{"id":"R18192","pred":"arg2Of","subj":"T25450","obj":"T25448"},{"id":"R18193","pred":"arg1Of","subj":"T25450","obj":"T25452"},{"id":"R18194","pred":"arg2Of","subj":"T25451","obj":"T25450"},{"id":"R18195","pred":"arg2Of","subj":"T25453","obj":"T25452"},{"id":"R18196","pred":"arg3Of","subj":"T25454","obj":"T25452"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T25353","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25352","span":{"begin":161,"end":168},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T25607","span":{"begin":174,"end":181},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T25606","span":{"begin":161,"end":168},"obj":"http://www.uniprot.org/uniprot/P28033"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T25367","span":{"begin":142,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0003823"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T25379","span":{"begin":142,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0042571"},{"id":"T25376","span":{"begin":142,"end":152},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T25373","span":{"begin":96,"end":105},"obj":"http://purl.obolibrary.org/obo/GO_0000785"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T25324","span":{"begin":0,"end":189},"obj":"Sentence"},{"id":"T214","span":{"begin":0,"end":189},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    simple1

    {"project":"simple1","denotations":[{"id":"T25387","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25386","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T25594","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25593","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T25649","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25648","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T25620","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25619","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T25738","span":{"begin":96,"end":105},"obj":"Entity"},{"id":"T25735","span":{"begin":142,"end":152},"obj":"Entity"},{"id":"T25723","span":{"begin":61,"end":67},"obj":"Entity"},{"id":"T25721","span":{"begin":161,"end":168},"obj":"Protein"},{"id":"T25719","span":{"begin":183,"end":187},"obj":"Entity"},{"id":"T25711","span":{"begin":172,"end":181},"obj":"Protein"},{"id":"T25705","span":{"begin":0,"end":20},"obj":"Entity"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T25666","span":{"begin":183,"end":187},"obj":"Protein"},{"id":"T25665","span":{"begin":172,"end":181},"obj":"Protein"},{"id":"T25664","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    testone

    {"project":"testone","denotations":[{"id":"T25280","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25279","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}

    test3

    {"project":"test3","denotations":[{"id":"T25311","span":{"begin":161,"end":168},"obj":"Protein"},{"id":"T25298","span":{"begin":172,"end":188},"obj":"Protein"},{"id":"T25297","span":{"begin":161,"end":168},"obj":"Protein"}],"text":"RAW264.7 macrophages were treated in the presence or absence of LPS for the indicated times and chromatin immunoprecipitation performed using antibodies against C/EBP-β or p-C/EBP-β (T217)."}