PMC:3589482 / 30816-30936
Annnotations
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T14570","span":{"begin":109,"end":120},"obj":"NNPS"},{"id":"T14569","span":{"begin":101,"end":108},"obj":"JJ"},{"id":"T14568","span":{"begin":88,"end":100},"obj":"NNP"},{"id":"T14567","span":{"begin":84,"end":87},"obj":"CC"},{"id":"T14566","span":{"begin":79,"end":83},"obj":"NNP"},{"id":"T14565","span":{"begin":76,"end":78},"obj":"IN"},{"id":"T14564","span":{"begin":65,"end":75},"obj":"NNP"},{"id":"T14563","span":{"begin":60,"end":64},"obj":"NNP"},{"id":"T14562","span":{"begin":51,"end":59},"obj":"NNP"},{"id":"T14561","span":{"begin":39,"end":50},"obj":"JJ"},{"id":"T14560","span":{"begin":35,"end":38},"obj":"CC"},{"id":"T14559","span":{"begin":22,"end":34},"obj":"NNP"},{"id":"T14558","span":{"begin":17,"end":21},"obj":"DT"},{"id":"T14557","span":{"begin":8,"end":16},"obj":"NNPS"},{"id":"T14556","span":{"begin":6,"end":7},"obj":"SYM"},{"id":"T14555","span":{"begin":5,"end":6},"obj":":"},{"id":"T14554","span":{"begin":0,"end":5},"obj":"SYM"}],"relations":[{"id":"R10686","pred":"punct","subj":"T14554","obj":"T14570"},{"id":"R10687","pred":"punct","subj":"T14555","obj":"T14570"},{"id":"R10688","pred":"punct","subj":"T14556","obj":"T14570"},{"id":"R10689","pred":"compound","subj":"T14557","obj":"T14559"},{"id":"R10690","pred":"preconj","subj":"T14558","obj":"T14559"},{"id":"R10691","pred":"nmod","subj":"T14559","obj":"T14570"},{"id":"R10692","pred":"cc","subj":"T14560","obj":"T14559"},{"id":"R10693","pred":"amod","subj":"T14561","obj":"T14564"},{"id":"R10694","pred":"compound","subj":"T14562","obj":"T14564"},{"id":"R10695","pred":"compound","subj":"T14563","obj":"T14564"},{"id":"R10696","pred":"conj","subj":"T14564","obj":"T14559"},{"id":"R10697","pred":"prep","subj":"T14565","obj":"T14564"},{"id":"R10698","pred":"pobj","subj":"T14566","obj":"T14565"},{"id":"R10699","pred":"cc","subj":"T14567","obj":"T14566"},{"id":"R10700","pred":"conj","subj":"T14568","obj":"T14566"},{"id":"R10701","pred":"compound","subj":"T14569","obj":"T14570"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T14059","span":{"begin":0,"end":7},"obj":"NN"},{"id":"T14073","span":{"begin":109,"end":120},"obj":"NN"},{"id":"T14072","span":{"begin":101,"end":108},"obj":"JJ"},{"id":"T14071","span":{"begin":88,"end":100},"obj":"JJ"},{"id":"T14070","span":{"begin":84,"end":87},"obj":"CC"},{"id":"T14069","span":{"begin":79,"end":83},"obj":"NN"},{"id":"T14068","span":{"begin":76,"end":78},"obj":"IN"},{"id":"T14067","span":{"begin":65,"end":75},"obj":"NN"},{"id":"T14066","span":{"begin":60,"end":64},"obj":"NN"},{"id":"T14065","span":{"begin":51,"end":59},"obj":"NN"},{"id":"T14064","span":{"begin":39,"end":50},"obj":"JJ"},{"id":"T14063","span":{"begin":35,"end":38},"obj":"CC"},{"id":"T14062","span":{"begin":22,"end":34},"obj":"JJ"},{"id":"T14061","span":{"begin":17,"end":21},"obj":"CC"},{"id":"T14060","span":{"begin":8,"end":16},"obj":"NN"}],"relations":[{"id":"R10339","pred":"arg1Of","subj":"T14060","obj":"T14059"},{"id":"R10340","pred":"arg1Of","subj":"T14062","obj":"T14063"},{"id":"R10341","pred":"arg2Of","subj":"T14064","obj":"T14063"},{"id":"R10342","pred":"arg1Of","subj":"T14067","obj":"T14060"},{"id":"R10343","pred":"arg1Of","subj":"T14067","obj":"T14061"},{"id":"R10344","pred":"arg1Of","subj":"T14067","obj":"T14062"},{"id":"R10345","pred":"arg1Of","subj":"T14067","obj":"T14064"},{"id":"R10346","pred":"arg1Of","subj":"T14067","obj":"T14065"},{"id":"R10347","pred":"arg1Of","subj":"T14067","obj":"T14066"},{"id":"R10348","pred":"arg1Of","subj":"T14067","obj":"T14068"},{"id":"R10349","pred":"arg1Of","subj":"T14069","obj":"T14070"},{"id":"R10350","pred":"arg2Of","subj":"T14070","obj":"T14068"},{"id":"R10351","pred":"arg2Of","subj":"T14073","obj":"T14070"},{"id":"R10352","pred":"arg1Of","subj":"T14073","obj":"T14071"},{"id":"R10353","pred":"arg1Of","subj":"T14073","obj":"T14072"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T14019","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T14018","span":{"begin":0,"end":7},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T14294","span":{"begin":0,"end":7},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T14302","span":{"begin":51,"end":59},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
sentences
{"project":"sentences","denotations":[{"id":"T13960","span":{"begin":0,"end":120},"obj":"Sentence"},{"id":"T189","span":{"begin":0,"end":120},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
simple1
{"project":"simple1","denotations":[{"id":"T14041","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T14040","span":{"begin":0,"end":7},"obj":"Protein"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T14272","span":{"begin":8,"end":16},"obj":"Positive_regulation"},{"id":"T14271","span":{"begin":39,"end":50},"obj":"Positive_regulation"},{"id":"T14270","span":{"begin":65,"end":75},"obj":"Transcription"},{"id":"T14252","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T14251","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R10515","pred":"themeOf","subj":"T14252","obj":"T14271"},{"id":"R10516","pred":"themeOf","subj":"T14252","obj":"T14270"},{"id":"R10531","pred":"themeOf","subj":"T14270","obj":"T14272"},{"id":"R10532","pred":"themeOf","subj":"T14270","obj":"T14271"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T14406","span":{"begin":65,"end":75},"obj":"Transcription"},{"id":"T14405","span":{"begin":8,"end":16},"obj":"Positive_regulation"},{"id":"T14404","span":{"begin":39,"end":50},"obj":"Positive_regulation"},{"id":"T14386","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T14385","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R10587","pred":"causeOf","subj":"T14385","obj":"T14405"},{"id":"R10588","pred":"causeOf","subj":"T14385","obj":"T14405"},{"id":"R10589","pred":"themeOf","subj":"T14386","obj":"T14404"},{"id":"R10590","pred":"themeOf","subj":"T14386","obj":"T14406"},{"id":"R10606","pred":"themeOf","subj":"T14404","obj":"T14405"},{"id":"R10607","pred":"themeOf","subj":"T14404","obj":"T14405"},{"id":"R10608","pred":"themeOf","subj":"T14406","obj":"T14405"},{"id":"R10609","pred":"themeOf","subj":"T14406","obj":"T14404"},{"id":"R10586","pred":"causeOf","subj":"T14385","obj":"T14405"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T14332","span":{"begin":39,"end":50},"obj":"Positive_regulation"},{"id":"T14331","span":{"begin":22,"end":34},"obj":"Positive_regulation"},{"id":"T14330","span":{"begin":8,"end":16},"obj":"Positive_regulation"},{"id":"T14329","span":{"begin":65,"end":75},"obj":"Transcription"},{"id":"T14311","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T14310","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R10545","pred":"themeOf","subj":"T14311","obj":"T14329"},{"id":"R10561","pred":"themeOf","subj":"T14329","obj":"T14330"},{"id":"R10562","pred":"themeOf","subj":"T14329","obj":"T14331"},{"id":"R10563","pred":"themeOf","subj":"T14329","obj":"T14332"},{"id":"R10544","pred":"causeOf","subj":"T14310","obj":"T14330"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T14528","span":{"begin":88,"end":120},"obj":"Entity"},{"id":"T14517","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T14500","span":{"begin":60,"end":64},"obj":"Protein"},{"id":"T14553","span":{"begin":60,"end":120},"obj":"Gene_expression"},{"id":"T14552","span":{"begin":60,"end":120},"obj":"Transcription"},{"id":"T14535","span":{"begin":39,"end":59},"obj":"Protein"},{"id":"T14534","span":{"begin":39,"end":50},"obj":"Entity"},{"id":"T14533","span":{"begin":79,"end":83},"obj":"Protein"}],"relations":[{"id":"R10667","pred":"themeOf","subj":"T14500","obj":"T14552"},{"id":"R10668","pred":"themeOf","subj":"T14500","obj":"T14553"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T14432","span":{"begin":8,"end":16},"obj":"Positive_regulation"},{"id":"T14431","span":{"begin":39,"end":50},"obj":"Positive_regulation"},{"id":"T14430","span":{"begin":8,"end":16},"obj":"Positive_regulation"},{"id":"T14429","span":{"begin":65,"end":75},"obj":"Gene_expression"},{"id":"T14428","span":{"begin":51,"end":64},"obj":"Protein"},{"id":"T14427","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R10620","pred":"causeOf","subj":"T14427","obj":"T14430"},{"id":"R10621","pred":"causeOf","subj":"T14427","obj":"T14432"},{"id":"R10622","pred":"themeOf","subj":"T14428","obj":"T14429"},{"id":"R10623","pred":"themeOf","subj":"T14429","obj":"T14430"},{"id":"R10624","pred":"themeOf","subj":"T14429","obj":"T14431"},{"id":"R10625","pred":"themeOf","subj":"T14431","obj":"T14432"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
testone
{"project":"testone","denotations":[{"id":"T13879","span":{"begin":60,"end":75},"obj":"Transcription"},{"id":"T13878","span":{"begin":43,"end":50},"obj":"Positive_regulation"},{"id":"T13877","span":{"begin":8,"end":16},"obj":"Positive_regulation"},{"id":"T13859","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T13858","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R10247","pred":"causeOf","subj":"T13858","obj":"T13877"},{"id":"R10248","pred":"themeOf","subj":"T13859","obj":"T13879"},{"id":"R10262","pred":"themeOf","subj":"T13878","obj":"T13877"},{"id":"R10263","pred":"themeOf","subj":"T13879","obj":"T13878"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}
test3
{"project":"test3","denotations":[{"id":"T13921","span":{"begin":60,"end":75},"obj":"Transcription"},{"id":"T13920","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T13919","span":{"begin":43,"end":50},"obj":"Positive_regulation"},{"id":"T13918","span":{"begin":0,"end":7},"obj":"Protein"},{"id":"T13900","span":{"begin":51,"end":59},"obj":"Protein"},{"id":"T13899","span":{"begin":0,"end":7},"obj":"Protein"}],"relations":[{"id":"R10273","pred":"themeOf","subj":"T13920","obj":"T13921"},{"id":"R10274","pred":"themeOf","subj":"T13921","obj":"T13919"}],"text":"C/EBP-β Mediates both Constitutive and LPS-induced SerpinB2 mRNA Expression in MEFs and Inflammatory Primary Macrophages"}