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PMC:3589482 / 30124-30411 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13751 286-287 . denotes .
T13750 285-286 NN denotes ε
T13749 284-285 : denotes -
T13748 279-284 NNP denotes C/EBP
T13747 275-278 CC denotes and
T13746 273-274 NN denotes δ
T13745 272-273 : denotes -
T13744 267-272 NNP denotes C/EBP
T13743 265-266 , denotes ,
T13742 264-265 NN denotes β
T13741 263-264 : denotes -
T13740 258-263 NNP denotes C/EBP
T13739 256-257 , denotes ,
T13738 255-256 NN denotes α
T13737 254-255 : denotes -
T13736 249-254 NNP denotes C/EBP
T13735 245-248 IN denotes for
T13734 236-244 JJ denotes specific
T13733 225-235 NNS denotes antibodies
T13732 220-224 IN denotes with
T13731 210-219 NNS denotes complexes
T13730 195-209 JJ denotes nucleo-protein
T13729 191-194 DT denotes the
T13728 180-190 VBG denotes incubating
T13727 174-179 IN denotes after
T13726 164-173 VBN denotes performed
T13725 160-163 VBD denotes was
T13724 155-159 NNP denotes EMSA
T13723 153-154 , denotes ,
T13722 146-153 NN denotes complex
T13721 132-145 JJ denotes LPS-inducible
T13720 128-131 DT denotes the
T13719 125-127 IN denotes of
T13718 112-124 RB denotes particularly
T13717 108-111 CC denotes and
T13716 106-107 , denotes ,
T13715 97-106 NNS denotes complexes
T13714 82-96 NN denotes nucleo-protein
T13713 72-81 JJ denotes different
T13712 68-71 DT denotes the
T13711 65-67 IN denotes of
T13710 55-64 NN denotes formation
T13709 51-54 DT denotes the
T13708 48-50 IN denotes in
T13707 39-47 VBN denotes involved
T13706 34-38 VBD denotes were
T13705 25-33 NNS denotes proteins
T13704 19-24 NNP denotes C/EBP
T13703 13-18 WDT denotes which
T13702 3-12 VB denotes determine
T13701 0-2 TO denotes To
R10121 T13701 T13702 aux To,determine
R10122 T13702 T13707 advcl determine,involved
R10123 T13703 T13705 det which,proteins
R10124 T13704 T13705 compound C/EBP,proteins
R10125 T13705 T13707 nsubjpass proteins,involved
R10126 T13706 T13707 auxpass were,involved
R10127 T13707 T13707 ROOT involved,involved
R10128 T13708 T13707 prep in,involved
R10129 T13709 T13710 det the,formation
R10130 T13710 T13708 pobj formation,in
R10131 T13711 T13710 prep of,formation
R10132 T13712 T13715 det the,complexes
R10133 T13713 T13715 amod different,complexes
R10134 T13714 T13715 compound nucleo-protein,complexes
R10135 T13715 T13711 pobj complexes,of
R10136 T13716 T13707 punct ",",involved
R10137 T13717 T13707 cc and,involved
R10138 T13718 T13719 advmod particularly,of
R10139 T13719 T13726 prep of,performed
R10140 T13720 T13722 det the,complex
R10141 T13721 T13722 compound LPS-inducible,complex
R10142 T13722 T13719 pobj complex,of
R10143 T13723 T13726 punct ",",performed
R10144 T13724 T13726 nsubjpass EMSA,performed
R10145 T13725 T13726 auxpass was,performed
R10146 T13726 T13707 conj performed,involved
R10147 T13727 T13726 prep after,performed
R10148 T13728 T13727 pcomp incubating,after
R10149 T13729 T13731 det the,complexes
R10150 T13730 T13731 amod nucleo-protein,complexes
R10151 T13731 T13728 dobj complexes,incubating
R10152 T13732 T13731 prep with,complexes
R10153 T13733 T13732 pobj antibodies,with
R10154 T13734 T13733 amod specific,antibodies
R10155 T13735 T13734 prep for,specific
R10156 T13736 T13735 pobj C/EBP,for
R10157 T13737 T13738 punct -,α
R10158 T13738 T13727 dep α,after
R10159 T13739 T13738 punct ",",α
R10160 T13740 T13742 compound C/EBP,β
R10161 T13741 T13742 punct -,β
R10162 T13742 T13738 conj β,α
R10163 T13743 T13742 punct ",",β
R10164 T13744 T13746 compound C/EBP,δ
R10165 T13745 T13746 punct -,δ
R10166 T13746 T13742 appos δ,β
R10167 T13747 T13746 cc and,δ
R10168 T13748 T13750 compound C/EBP,ε
R10169 T13749 T13750 punct -,ε
R10170 T13750 T13746 conj ε,δ
R10171 T13751 T13726 punct .,performed

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13387 279-286 NN denotes C/EBP-ε
T13386 275-278 CC denotes and
T13385 267-274 NN denotes C/EBP-δ
T13384 265-266 -COMMA- denotes ,
T13383 258-265 NN denotes C/EBP-β
T13382 256-257 -COMMA- denotes ,
T13381 249-256 NN denotes C/EBP-α
T13380 245-248 IN denotes for
T13379 236-244 JJ denotes specific
T13378 225-235 NN denotes antibodies
T13377 220-224 IN denotes with
T13376 210-219 NN denotes complexes
T13375 195-209 JJ denotes nucleo-protein
T13374 191-194 DT denotes the
T13373 180-190 VB denotes incubating
T13372 174-179 IN denotes after
T13371 164-173 VB denotes performed
T13370 160-163 VB denotes was
T13369 155-159 NN denotes EMSA
T13368 153-154 -COMMA- denotes ,
T13367 146-153 NN denotes complex
T13366 132-145 JJ denotes LPS-inducible
T13365 128-131 DT denotes the
T13364 125-127 IN denotes of
T13363 112-124 RB denotes particularly
T13362 108-111 CC denotes and
T13361 106-107 -COMMA- denotes ,
T13360 97-106 NN denotes complexes
T13359 82-96 JJ denotes nucleo-protein
T13358 72-81 JJ denotes different
T13357 68-71 DT denotes the
T13356 65-67 IN denotes of
T13355 55-64 NN denotes formation
T13354 51-54 DT denotes the
T13353 48-50 IN denotes in
T13352 39-47 VB denotes involved
T13351 34-38 VB denotes were
T13350 25-33 NN denotes proteins
T13349 19-24 NN denotes C/EBP
T13348 13-18 WDT denotes which
T13347 3-12 VB denotes determine
T13346 0-2 TO denotes To
R9869 T13347 T13346 arg1Of determine,To
R9870 T13348 T13347 arg2Of which,determine
R9871 T13350 T13348 arg1Of proteins,which
R9872 T13350 T13349 arg1Of proteins,C/EBP
R9873 T13350 T13351 arg1Of proteins,were
R9874 T13350 T13352 arg2Of proteins,involved
R9875 T13352 T13351 arg2Of involved,were
R9876 T13352 T13353 arg1Of involved,in
R9877 T13352 T13364 arg1Of involved,of
R9878 T13353 T13362 arg1Of in,and
R9879 T13355 T13353 arg2Of formation,in
R9880 T13355 T13354 arg1Of formation,the
R9881 T13355 T13356 arg1Of formation,of
R9882 T13359 T13358 arg1Of nucleo-protein,different
R9883 T13360 T13356 arg2Of complexes,of
R9884 T13360 T13357 arg1Of complexes,the
R9885 T13360 T13359 arg1Of complexes,nucleo-protein
R9886 T13362 T13361 arg1Of and,","
R9887 T13364 T13362 arg2Of of,and
R9888 T13364 T13363 arg1Of of,particularly
R9889 T13367 T13364 arg2Of complex,of
R9890 T13367 T13365 arg1Of complex,the
R9891 T13367 T13366 arg1Of complex,LPS-inducible
R9892 T13369 T13370 arg1Of EMSA,was
R9893 T13369 T13371 arg2Of EMSA,performed
R9894 T13369 T13373 arg1Of EMSA,incubating
R9895 T13371 T13346 modOf performed,To
R9896 T13371 T13368 arg1Of performed,","
R9897 T13371 T13370 arg2Of performed,was
R9898 T13371 T13372 arg1Of performed,after
R9899 T13373 T13372 arg2Of incubating,after
R9900 T13373 T13377 arg1Of incubating,with
R9901 T13376 T13373 arg2Of complexes,incubating
R9902 T13376 T13374 arg1Of complexes,the
R9903 T13376 T13375 arg1Of complexes,nucleo-protein
R9904 T13378 T13377 arg2Of antibodies,with
R9905 T13378 T13379 arg1Of antibodies,specific
R9906 T13379 T13380 arg1Of specific,for
R9907 T13381 T13382 arg1Of C/EBP-α,","
R9908 T13382 T13384 arg1Of ",",","
R9909 T13383 T13382 arg2Of C/EBP-β,","
R9910 T13384 T13386 arg1Of ",",and
R9911 T13385 T13384 arg2Of C/EBP-δ,","
R9912 T13386 T13380 arg2Of and,for
R9913 T13387 T13386 arg2Of C/EBP-ε,and

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T13185 279-286 Antecedent denotes C/EBP-ε
T13184 267-274 Antecedent denotes C/EBP-δ
T13183 258-265 Antecedent denotes C/EBP-β
T13182 249-256 Antecedent denotes C/EBP-α

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T13192 249-256 Protein denotes C/EBP-α
T13195 279-286 Protein denotes C/EBP-ε
T13194 267-274 Protein denotes C/EBP-δ
T13193 258-265 Protein denotes C/EBP-β

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13468 258-265 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β

GO-BP

Id Subject Object Predicate Lexical cue
T13207 55-64 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

GO-MF

Id Subject Object Predicate Lexical cue
T13216 225-235 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T13226 225-235 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T13224 225-235 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T13223 202-219 http://purl.obolibrary.org/obo/GO_0043234 denotes protein complexes
T13222 89-106 http://purl.obolibrary.org/obo/GO_0043234 denotes protein complexes

sentences

Id Subject Object Predicate Lexical cue
T13145 0-287 Sentence denotes To determine which C/EBP proteins were involved in the formation of the different nucleo-protein complexes, and particularly of the LPS-inducible complex, EMSA was performed after incubating the nucleo-protein complexes with antibodies specific for C/EBP-α, C/EBP-β, C/EBP-δ and C/EBP-ε.
T185 0-287 Sentence denotes To determine which C/EBP proteins were involved in the formation of the different nucleo-protein complexes, and particularly of the LPS-inducible complex, EMSA was performed after incubating the nucleo-protein complexes with antibodies specific for C/EBP-α, C/EBP-β, C/EBP-δ and C/EBP-ε.

simple1

Id Subject Object Predicate Lexical cue
T13239 279-286 Protein denotes C/EBP-ε
T13238 267-274 Protein denotes C/EBP-δ
T13237 258-265 Protein denotes C/EBP-β
T13236 249-256 Protein denotes C/EBP-α

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T13461 267-274 Protein denotes C/EBP-δ
T13460 258-265 Protein denotes C/EBP-β
T13459 249-256 Protein denotes C/EBP-α
T13458 279-286 Protein denotes C/EBP-ε

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13506 267-274 Protein denotes C/EBP-δ
T13505 258-265 Protein denotes C/EBP-β
T13504 249-256 Protein denotes C/EBP-α
T13503 279-286 Protein denotes C/EBP-ε

DLUT931

Id Subject Object Predicate Lexical cue
T13481 267-274 Protein denotes C/EBP-δ
T13480 258-265 Protein denotes C/EBP-β
T13479 249-256 Protein denotes C/EBP-α
T13478 279-286 Protein denotes C/EBP-ε

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T13592 279-286 Protein denotes C/EBP-ε
T13589 267-274 Protein denotes C/EBP-δ
T13588 249-256 Protein denotes C/EBP-α
T13583 19-24 Protein denotes C/EBP
T13582 191-219 Protein denotes the nucleo-protein complexes
T13578 128-154 Entity denotes the LPS-inducible complex,
T13571 19-33 Protein denotes C/EBP proteins
T13569 65-106 Entity denotes of the different nucleo-protein complexes
T13567 191-219 Entity denotes the nucleo-protein complexes
T13562 225-235 Entity denotes antibodies
T13559 65-106 Protein denotes of the different nucleo-protein complexes
T13558 258-265 Protein denotes C/EBP-β

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13529 279-286 Protein denotes C/EBP-ε
T13528 258-274 Protein denotes C/EBP-β, C/EBP-δ
T13527 249-256 Protein denotes C/EBP-α
T13526 19-33 Protein denotes C/EBP proteins

testone

Id Subject Object Predicate Lexical cue
T13114 39-47 Regulation denotes involved
T13107 279-286 Protein denotes C/EBP-ε
T13106 267-274 Protein denotes C/EBP-δ
T13105 258-265 Protein denotes C/EBP-β
T13104 249-256 Protein denotes C/EBP-α

test3

Id Subject Object Predicate Lexical cue
T13138 279-286 Protein denotes C/EBP-ε
T13137 267-274 Protein denotes C/EBP-δ
T13136 258-265 Protein denotes C/EBP-β
T13135 249-256 Protein denotes C/EBP-α
T13124 279-286 Protein denotes C/EBP-ε
T13123 267-274 Protein denotes C/EBP-δ
T13122 258-265 Protein denotes C/EBP-β
T13121 249-256 Protein denotes C/EBP-α