PMC:3589482 / 28640-28791 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T24349","span":{"begin":150,"end":151},"obj":"."},{"id":"T24348","span":{"begin":149,"end":150},"obj":"NN"},{"id":"T24347","span":{"begin":148,"end":149},"obj":":"},{"id":"T24346","span":{"begin":143,"end":148},"obj":"NNP"},{"id":"T24345","span":{"begin":134,"end":142},"obj":"VBZ"},{"id":"T24344","span":{"begin":129,"end":133},"obj":"NN"},{"id":"T24343","span":{"begin":123,"end":128},"obj":"NNP"},{"id":"T24342","span":{"begin":114,"end":122},"obj":"NN"},{"id":"T24341","span":{"begin":105,"end":113},"obj":"JJ"},{"id":"T24340","span":{"begin":96,"end":104},"obj":"NNP"},{"id":"T24339","span":{"begin":89,"end":95},"obj":"NN"},{"id":"T24338","span":{"begin":85,"end":88},"obj":"DT"},{"id":"T24337","span":{"begin":77,"end":84},"obj":"JJ"},{"id":"T24336","span":{"begin":70,"end":76},"obj":"NN"},{"id":"T24335","span":{"begin":62,"end":69},"obj":"JJ"},{"id":"T24334","span":{"begin":48,"end":61},"obj":"JJ"},{"id":"T24333","span":{"begin":44,"end":47},"obj":"DT"}],"relations":[{"id":"R17429","pred":"det","subj":"T24333","obj":"T24336"},{"id":"R17430","pred":"amod","subj":"T24334","obj":"T24336"},{"id":"R17431","pred":"amod","subj":"T24335","obj":"T24336"},{"id":"R17432","pred":"nsubj","subj":"T24336","obj":"T24337"},{"id":"R17433","pred":"ROOT","subj":"T24337","obj":"T24337"},{"id":"R17434","pred":"det","subj":"T24338","obj":"T24344"},{"id":"R17435","pred":"amod","subj":"T24339","obj":"T24344"},{"id":"R17436","pred":"nmod","subj":"T24340","obj":"T24342"},{"id":"R17437","pred":"amod","subj":"T24341","obj":"T24342"},{"id":"R17438","pred":"compound","subj":"T24342","obj":"T24344"},{"id":"R17439","pred":"compound","subj":"T24343","obj":"T24344"},{"id":"R17440","pred":"nsubj","subj":"T24344","obj":"T24345"},{"id":"R17441","pred":"ccomp","subj":"T24345","obj":"T24337"},{"id":"R17442","pred":"compound","subj":"T24346","obj":"T24348"},{"id":"R17443","pred":"punct","subj":"T24347","obj":"T24348"},{"id":"R17444","pred":"dobj","subj":"T24348","obj":"T24345"},{"id":"R17445","pred":"punct","subj":"T24349","obj":"T24337"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T24222","span":{"begin":123,"end":128},"obj":"NN"},{"id":"T24221","span":{"begin":114,"end":122},"obj":"NN"},{"id":"T24220","span":{"begin":105,"end":113},"obj":"JJ"},{"id":"T24219","span":{"begin":96,"end":104},"obj":"NN"},{"id":"T24218","span":{"begin":89,"end":95},"obj":"JJ"},{"id":"T24217","span":{"begin":85,"end":88},"obj":"DT"},{"id":"T24216","span":{"begin":77,"end":84},"obj":"VB"},{"id":"T24215","span":{"begin":70,"end":76},"obj":"NN"},{"id":"T24214","span":{"begin":62,"end":69},"obj":"JJ"},{"id":"T24213","span":{"begin":48,"end":61},"obj":"JJ"},{"id":"T24212","span":{"begin":44,"end":47},"obj":"DT"},{"id":"T24225","span":{"begin":143,"end":150},"obj":"NN"},{"id":"T24224","span":{"begin":134,"end":142},"obj":"VB"},{"id":"T24223","span":{"begin":129,"end":133},"obj":"NN"}],"relations":[{"id":"R17389","pred":"arg1Of","subj":"T24215","obj":"T24212"},{"id":"R17390","pred":"arg1Of","subj":"T24215","obj":"T24213"},{"id":"R17391","pred":"arg1Of","subj":"T24215","obj":"T24214"},{"id":"R17392","pred":"arg1Of","subj":"T24215","obj":"T24216"},{"id":"R17393","pred":"arg1Of","subj":"T24215","obj":"T24224"},{"id":"R17394","pred":"arg2Of","subj":"T24223","obj":"T24216"},{"id":"R17395","pred":"arg1Of","subj":"T24223","obj":"T24217"},{"id":"R17396","pred":"arg1Of","subj":"T24223","obj":"T24218"},{"id":"R17397","pred":"arg1Of","subj":"T24223","obj":"T24219"},{"id":"R17398","pred":"arg1Of","subj":"T24223","obj":"T24220"},{"id":"R17399","pred":"arg1Of","subj":"T24223","obj":"T24221"},{"id":"R17400","pred":"arg1Of","subj":"T24223","obj":"T24222"},{"id":"R17401","pred":"arg2Of","subj":"T24225","obj":"T24224"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T24190","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24189","span":{"begin":96,"end":104},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T24253","span":{"begin":143,"end":150},"obj":"http://www.uniprot.org/uniprot/P28033"},{"id":"T24249","span":{"begin":96,"end":104},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T24196","span":{"begin":77,"end":84},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    sentences

    {"project":"sentences","denotations":[{"id":"T24176","span":{"begin":44,"end":151},"obj":"Sentence"},{"id":"T178","span":{"begin":0,"end":151},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    simple1

    {"project":"simple1","denotations":[{"id":"T24206","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24205","span":{"begin":96,"end":104},"obj":"Protein"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T24248","span":{"begin":77,"end":84},"obj":"Binding"},{"id":"T24242","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24241","span":{"begin":96,"end":104},"obj":"Protein"}],"relations":[{"id":"R17410","pred":"themeOf","subj":"T24241","obj":"T24248"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T24276","span":{"begin":77,"end":84},"obj":"Binding"},{"id":"T24270","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24269","span":{"begin":96,"end":104},"obj":"Protein"}],"relations":[{"id":"R17413","pred":"themeOf","subj":"T24269","obj":"T24276"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T24261","span":{"begin":77,"end":84},"obj":"Binding"},{"id":"T24255","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24254","span":{"begin":96,"end":104},"obj":"Protein"}],"relations":[{"id":"R17411","pred":"themeOf","subj":"T24254","obj":"T24261"},{"id":"R17412","pred":"themeOf","subj":"T24255","obj":"T24261"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T24331","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T24322","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24316","span":{"begin":125,"end":128},"obj":"Protein"},{"id":"T24313","span":{"begin":85,"end":128},"obj":"Entity"},{"id":"T24308","span":{"begin":129,"end":133},"obj":"Entity"}],"relations":[{"id":"R17428","pred":"partOf","subj":"T24313","obj":"T24331"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T24279","span":{"begin":77,"end":84},"obj":"Binding"},{"id":"T24278","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24277","span":{"begin":89,"end":133},"obj":"Protein"}],"relations":[{"id":"R17414","pred":"themeOf","subj":"T24277","obj":"T24279"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    testone

    {"project":"testone","denotations":[{"id":"T24160","span":{"begin":77,"end":84},"obj":"Binding"},{"id":"T24159","span":{"begin":52,"end":61},"obj":"Positive_regulation"},{"id":"T24153","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24152","span":{"begin":96,"end":104},"obj":"Protein"}],"relations":[{"id":"R17382","pred":"themeOf","subj":"T24153","obj":"T24160"},{"id":"R17383","pred":"themeOf","subj":"T24160","obj":"T24159"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}

    test3

    {"project":"test3","denotations":[{"id":"T24170","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24169","span":{"begin":96,"end":104},"obj":"Protein"},{"id":"T24168","span":{"begin":77,"end":84},"obj":"Binding"},{"id":"T24162","span":{"begin":143,"end":150},"obj":"Protein"},{"id":"T24161","span":{"begin":96,"end":104},"obj":"Protein"}],"relations":[{"id":"R17384","pred":"themeOf","subj":"T24169","obj":"T24168"},{"id":"R17385","pred":"themeOf","subj":"T24170","obj":"T24168"}],"text":"10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β."}