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PMC:3589482 / 28640-28791 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T24349 150-151 . denotes .
T24348 149-150 NN denotes β
T24347 148-149 : denotes -
T24346 143-148 NNP denotes C/EBP
T24345 134-142 VBZ denotes contains
T24344 129-133 NN denotes site
T24343 123-128 NNP denotes C/EBP
T24342 114-122 NN denotes promoter
T24341 105-113 JJ denotes proximal
T24340 96-104 NNP denotes SerpinB2
T24339 89-95 NN denotes murine
T24338 85-88 DT denotes the
T24337 77-84 JJ denotes binding
T24336 70-76 NN denotes factor
T24335 62-69 JJ denotes nuclear
T24334 48-61 JJ denotes LPS-inducible
T24333 44-47 DT denotes The
R17429 T24333 T24336 det The,factor
R17430 T24334 T24336 amod LPS-inducible,factor
R17431 T24335 T24336 amod nuclear,factor
R17432 T24336 T24337 nsubj factor,binding
R17433 T24337 T24337 ROOT binding,binding
R17434 T24338 T24344 det the,site
R17435 T24339 T24344 amod murine,site
R17436 T24340 T24342 nmod SerpinB2,promoter
R17437 T24341 T24342 amod proximal,promoter
R17438 T24342 T24344 compound promoter,site
R17439 T24343 T24344 compound C/EBP,site
R17440 T24344 T24345 nsubj site,contains
R17441 T24345 T24337 ccomp contains,binding
R17442 T24346 T24348 compound C/EBP,β
R17443 T24347 T24348 punct -,β
R17444 T24348 T24345 dobj β,contains
R17445 T24349 T24337 punct .,binding

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T24222 123-128 NN denotes C/EBP
T24221 114-122 NN denotes promoter
T24220 105-113 JJ denotes proximal
T24219 96-104 NN denotes SerpinB2
T24218 89-95 JJ denotes murine
T24217 85-88 DT denotes the
T24216 77-84 VB denotes binding
T24215 70-76 NN denotes factor
T24214 62-69 JJ denotes nuclear
T24213 48-61 JJ denotes LPS-inducible
T24212 44-47 DT denotes The
T24225 143-150 NN denotes C/EBP-β
T24224 134-142 VB denotes contains
T24223 129-133 NN denotes site
R17389 T24215 T24212 arg1Of factor,The
R17390 T24215 T24213 arg1Of factor,LPS-inducible
R17391 T24215 T24214 arg1Of factor,nuclear
R17392 T24215 T24216 arg1Of factor,binding
R17393 T24215 T24224 arg1Of factor,contains
R17394 T24223 T24216 arg2Of site,binding
R17395 T24223 T24217 arg1Of site,the
R17396 T24223 T24218 arg1Of site,murine
R17397 T24223 T24219 arg1Of site,SerpinB2
R17398 T24223 T24220 arg1Of site,proximal
R17399 T24223 T24221 arg1Of site,promoter
R17400 T24223 T24222 arg1Of site,C/EBP
R17401 T24225 T24224 arg2Of C/EBP-β,contains

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T24190 143-150 Protein denotes C/EBP-β
T24189 96-104 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T24253 143-150 http://www.uniprot.org/uniprot/P28033 denotes C/EBP-β
T24249 96-104 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-MF

Id Subject Object Predicate Lexical cue
T24196 77-84 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T24176 44-151 Sentence denotes The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β.
T178 0-151 Sentence denotes 10.1371/journal.pone.0057855.g005 Figure 5 The LPS-inducible nuclear factor binding the murine SerpinB2 proximal promoter C/EBP site contains C/EBP-β.

simple1

Id Subject Object Predicate Lexical cue
T24206 143-150 Protein denotes C/EBP-β
T24205 96-104 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T24248 77-84 Binding denotes binding
T24242 143-150 Protein denotes C/EBP-β
T24241 96-104 Protein denotes SerpinB2
R17410 T24241 T24248 themeOf SerpinB2,binding

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T24276 77-84 Binding denotes binding
T24270 143-150 Protein denotes C/EBP-β
T24269 96-104 Protein denotes SerpinB2
R17413 T24269 T24276 themeOf SerpinB2,binding

DLUT931

Id Subject Object Predicate Lexical cue
T24261 77-84 Binding denotes binding
T24255 143-150 Protein denotes C/EBP-β
T24254 96-104 Protein denotes SerpinB2
R17411 T24254 T24261 themeOf SerpinB2,binding
R17412 T24255 T24261 themeOf C/EBP-β,binding

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T24331 96-104 Protein denotes SerpinB2
T24322 143-150 Protein denotes C/EBP-β
T24316 125-128 Protein denotes EBP
T24313 85-128 Entity denotes the murine SerpinB2 proximal promoter C/EBP
T24308 129-133 Entity denotes site
R17428 T24313 T24331 partOf the murine SerpinB2 proximal promoter C/EBP,SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T24279 77-84 Binding denotes binding
T24278 143-150 Protein denotes C/EBP-β
T24277 89-133 Protein denotes murine SerpinB2 proximal promoter C/EBP site
R17414 T24277 T24279 themeOf murine SerpinB2 proximal promoter C/EBP site,binding

testone

Id Subject Object Predicate Lexical cue
T24160 77-84 Binding denotes binding
T24159 52-61 Positive_regulation denotes inducible
T24153 143-150 Protein denotes C/EBP-β
T24152 96-104 Protein denotes SerpinB2
R17382 T24153 T24160 themeOf C/EBP-β,binding
R17383 T24160 T24159 themeOf binding,inducible

test3

Id Subject Object Predicate Lexical cue
T24170 143-150 Protein denotes C/EBP-β
T24169 96-104 Protein denotes SerpinB2
T24168 77-84 Binding denotes binding
T24162 143-150 Protein denotes C/EBP-β
T24161 96-104 Protein denotes SerpinB2
R17384 T24169 T24168 themeOf SerpinB2,binding
R17385 T24170 T24168 themeOf C/EBP-β,binding