PMC:3589482 / 27254-27459 JSONTXT

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T12849","span":{"begin":204,"end":205},"obj":"."},{"id":"T12848","span":{"begin":193,"end":204},"obj":"NNS"},{"id":"T12847","span":{"begin":187,"end":192},"obj":"CD"},{"id":"T12846","span":{"begin":183,"end":186},"obj":"NNP"},{"id":"T12845","span":{"begin":171,"end":182},"obj":"JJ"},{"id":"T12844","span":{"begin":167,"end":170},"obj":"CC"},{"id":"T12843","span":{"begin":157,"end":166},"obj":"JJ"},{"id":"T12842","span":{"begin":152,"end":156},"obj":"IN"},{"id":"T12841","span":{"begin":143,"end":151},"obj":"NNS"},{"id":"T12840","span":{"begin":135,"end":142},"obj":"JJ"},{"id":"T12839","span":{"begin":129,"end":134},"obj":"VBG"},{"id":"T12838","span":{"begin":127,"end":128},"obj":"-RRB-"},{"id":"T12837","span":{"begin":123,"end":127},"obj":"NNP"},{"id":"T12836","span":{"begin":122,"end":123},"obj":"-LRB-"},{"id":"T12835","span":{"begin":116,"end":121},"obj":"NN"},{"id":"T12834","span":{"begin":110,"end":115},"obj":"NN"},{"id":"T12833","span":{"begin":101,"end":109},"obj":"NN"},{"id":"T12832","span":{"begin":85,"end":100},"obj":"JJ"},{"id":"T12831","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T12830","span":{"begin":69,"end":81},"obj":"VBN"},{"id":"T12829","span":{"begin":65,"end":68},"obj":"VBD"},{"id":"T12828","span":{"begin":63,"end":64},"obj":"-RRB-"},{"id":"T12827","span":{"begin":60,"end":63},"obj":"CD"},{"id":"T12826","span":{"begin":59,"end":60},"obj":"NN"},{"id":"T12825","span":{"begin":58,"end":59},"obj":"CD"},{"id":"T12824","span":{"begin":55,"end":58},"obj":"CD"},{"id":"T12823","span":{"begin":54,"end":55},"obj":"FW"},{"id":"T12822","span":{"begin":53,"end":54},"obj":"-LRB-"},{"id":"T12821","span":{"begin":45,"end":52},"obj":"NN"},{"id":"T12820","span":{"begin":39,"end":44},"obj":"NNP"},{"id":"T12819","span":{"begin":30,"end":38},"obj":"JJ"},{"id":"T12818","span":{"begin":26,"end":29},"obj":"DT"},{"id":"T12817","span":{"begin":23,"end":25},"obj":"TO"},{"id":"T12816","span":{"begin":15,"end":22},"obj":"JJ"},{"id":"T12815","span":{"begin":8,"end":14},"obj":"NN"},{"id":"T12814","span":{"begin":0,"end":7},"obj":"NNP"}],"relations":[{"id":"R9478","pred":"compound","subj":"T12814","obj":"T12815"},{"id":"R9481","pred":"prep","subj":"T12817","obj":"T12816"},{"id":"R9482","pred":"det","subj":"T12818","obj":"T12821"},{"id":"R9483","pred":"amod","subj":"T12819","obj":"T12821"},{"id":"R9484","pred":"compound","subj":"T12820","obj":"T12821"},{"id":"R9485","pred":"pobj","subj":"T12821","obj":"T12817"},{"id":"R9486","pred":"punct","subj":"T12822","obj":"T12830"},{"id":"R9487","pred":"dep","subj":"T12823","obj":"T12830"},{"id":"R9488","pred":"nsubjpass","subj":"T12824","obj":"T12830"},{"id":"R9489","pred":"nsubjpass","subj":"T12825","obj":"T12830"},{"id":"R9490","pred":"nsubjpass","subj":"T12826","obj":"T12830"},{"id":"R9491","pred":"nummod","subj":"T12827","obj":"T12826"},{"id":"R9492","pred":"punct","subj":"T12828","obj":"T12826"},{"id":"R9493","pred":"auxpass","subj":"T12829","obj":"T12830"},{"id":"R9494","pred":"acl","subj":"T12830","obj":"T12821"},{"id":"R9495","pred":"agent","subj":"T12831","obj":"T12830"},{"id":"R9496","pred":"amod","subj":"T12832","obj":"T12835"},{"id":"R9497","pred":"compound","subj":"T12833","obj":"T12834"},{"id":"R9498","pred":"compound","subj":"T12834","obj":"T12835"},{"id":"R9499","pred":"pobj","subj":"T12835","obj":"T12831"},{"id":"R9500","pred":"punct","subj":"T12836","obj":"T12835"},{"id":"R9501","pred":"nmod","subj":"T12837","obj":"T12839"},{"id":"R9502","pred":"punct","subj":"T12838","obj":"T12839"},{"id":"R9503","pred":"parataxis","subj":"T12839","obj":"T12835"},{"id":"R9504","pred":"amod","subj":"T12840","obj":"T12841"},{"id":"R9505","pred":"dobj","subj":"T12841","obj":"T12839"},{"id":"R9506","pred":"prep","subj":"T12842","obj":"T12839"},{"id":"R9507","pred":"amod","subj":"T12843","obj":"T12846"},{"id":"R9508","pred":"cc","subj":"T12844","obj":"T12843"},{"id":"R9509","pred":"conj","subj":"T12845","obj":"T12843"},{"id":"R9510","pred":"pobj","subj":"T12846","obj":"T12842"},{"id":"R9511","pred":"nummod","subj":"T12847","obj":"T12848"},{"id":"R9512","pred":"pobj","subj":"T12848","obj":"T12842"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T12477","span":{"begin":193,"end":204},"obj":"NN"},{"id":"T12476","span":{"begin":187,"end":192},"obj":"CD"},{"id":"T12475","span":{"begin":183,"end":186},"obj":"NN"},{"id":"T12474","span":{"begin":171,"end":182},"obj":"JJ"},{"id":"T12473","span":{"begin":167,"end":170},"obj":"CC"},{"id":"T12472","span":{"begin":157,"end":166},"obj":"JJ"},{"id":"T12471","span":{"begin":152,"end":156},"obj":"IN"},{"id":"T12470","span":{"begin":143,"end":151},"obj":"NN"},{"id":"T12469","span":{"begin":135,"end":142},"obj":"JJ"},{"id":"T12468","span":{"begin":129,"end":134},"obj":"VB"},{"id":"T12467","span":{"begin":127,"end":128},"obj":"-RRB-"},{"id":"T12466","span":{"begin":123,"end":127},"obj":"NN"},{"id":"T12465","span":{"begin":122,"end":123},"obj":"-LRB-"},{"id":"T12464","span":{"begin":116,"end":121},"obj":"NN"},{"id":"T12463","span":{"begin":110,"end":115},"obj":"NN"},{"id":"T12462","span":{"begin":101,"end":109},"obj":"NN"},{"id":"T12461","span":{"begin":85,"end":100},"obj":"JJ"},{"id":"T12460","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T12459","span":{"begin":69,"end":81},"obj":"VB"},{"id":"T12458","span":{"begin":65,"end":68},"obj":"VB"},{"id":"T12457","span":{"begin":63,"end":64},"obj":"-RRB-"},{"id":"T12456","span":{"begin":54,"end":63},"obj":"NN"},{"id":"T12455","span":{"begin":53,"end":54},"obj":"-LRB-"},{"id":"T12454","span":{"begin":45,"end":52},"obj":"NN"},{"id":"T12453","span":{"begin":39,"end":44},"obj":"NN"},{"id":"T12452","span":{"begin":30,"end":38},"obj":"JJ"},{"id":"T12451","span":{"begin":26,"end":29},"obj":"DT"},{"id":"T12450","span":{"begin":23,"end":25},"obj":"TO"},{"id":"T12449","span":{"begin":15,"end":22},"obj":"VB"},{"id":"T12448","span":{"begin":8,"end":14},"obj":"NN"},{"id":"T12447","span":{"begin":0,"end":7},"obj":"JJ"}],"relations":[{"id":"R9180","pred":"arg1Of","subj":"T12448","obj":"T12447"},{"id":"R9181","pred":"arg1Of","subj":"T12448","obj":"T12449"},{"id":"R9182","pred":"arg1Of","subj":"T12448","obj":"T12458"},{"id":"R9183","pred":"arg2Of","subj":"T12448","obj":"T12459"},{"id":"R9184","pred":"arg1Of","subj":"T12448","obj":"T12468"},{"id":"R9185","pred":"arg1Of","subj":"T12449","obj":"T12450"},{"id":"R9186","pred":"arg2Of","subj":"T12454","obj":"T12450"},{"id":"R9187","pred":"arg1Of","subj":"T12454","obj":"T12451"},{"id":"R9188","pred":"arg1Of","subj":"T12454","obj":"T12452"},{"id":"R9189","pred":"arg1Of","subj":"T12454","obj":"T12453"},{"id":"R9190","pred":"arg1Of","subj":"T12454","obj":"T12455"},{"id":"R9191","pred":"arg2Of","subj":"T12456","obj":"T12455"},{"id":"R9192","pred":"arg3Of","subj":"T12457","obj":"T12455"},{"id":"R9193","pred":"arg2Of","subj":"T12459","obj":"T12458"},{"id":"R9194","pred":"modOf","subj":"T12459","obj":"T12468"},{"id":"R9195","pred":"arg1Of","subj":"T12464","obj":"T12459"},{"id":"R9196","pred":"arg2Of","subj":"T12464","obj":"T12460"},{"id":"R9197","pred":"arg1Of","subj":"T12464","obj":"T12461"},{"id":"R9198","pred":"arg1Of","subj":"T12464","obj":"T12462"},{"id":"R9199","pred":"arg1Of","subj":"T12464","obj":"T12463"},{"id":"R9200","pred":"arg1Of","subj":"T12464","obj":"T12465"},{"id":"R9201","pred":"arg2Of","subj":"T12466","obj":"T12465"},{"id":"R9202","pred":"arg3Of","subj":"T12467","obj":"T12465"},{"id":"R9203","pred":"arg2Of","subj":"T12470","obj":"T12468"},{"id":"R9204","pred":"arg1Of","subj":"T12470","obj":"T12469"},{"id":"R9205","pred":"arg1Of","subj":"T12470","obj":"T12471"},{"id":"R9206","pred":"arg1Of","subj":"T12472","obj":"T12473"},{"id":"R9207","pred":"arg2Of","subj":"T12474","obj":"T12473"},{"id":"R9208","pred":"arg2Of","subj":"T12477","obj":"T12471"},{"id":"R9209","pred":"arg1Of","subj":"T12477","obj":"T12472"},{"id":"R9210","pred":"arg1Of","subj":"T12477","obj":"T12474"},{"id":"R9211","pred":"arg1Of","subj":"T12477","obj":"T12475"},{"id":"R9212","pred":"arg1Of","subj":"T12477","obj":"T12476"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T12419","span":{"begin":15,"end":22},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}

    sentences

    {"project":"sentences","denotations":[{"id":"T12400","span":{"begin":0,"end":205},"obj":"Sentence"},{"id":"T172","span":{"begin":0,"end":205},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T12790","span":{"begin":157,"end":204},"obj":"Entity"},{"id":"T12786","span":{"begin":135,"end":151},"obj":"Entity"},{"id":"T12784","span":{"begin":39,"end":44},"obj":"Protein"},{"id":"T12766","span":{"begin":171,"end":182},"obj":"Entity"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T12722","span":{"begin":15,"end":22},"obj":"Binding"},{"id":"T12721","span":{"begin":39,"end":52},"obj":"Protein"}],"relations":[{"id":"R9439","pred":"themeOf","subj":"T12721","obj":"T12722"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}

    testone

    {"project":"testone","denotations":[{"id":"T12385","span":{"begin":15,"end":22},"obj":"Binding"}],"text":"Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages."}