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PMC:3589482 / 27254-27459 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12849 204-205 . denotes .
T12848 193-204 NNS denotes macrophages
T12847 187-192 CD denotes 264.7
T12846 183-186 NNP denotes RAW
T12845 171-182 JJ denotes LPS-treated
T12844 167-170 CC denotes and
T12843 157-166 JJ denotes untreated
T12842 152-156 IN denotes from
T12841 143-151 NNS denotes extracts
T12840 135-142 JJ denotes nuclear
T12839 129-134 VBG denotes using
T12838 127-128 -RRB- denotes )
T12837 123-127 NNP denotes EMSA
T12836 122-123 -LRB- denotes (
T12835 116-121 NN denotes assay
T12834 110-115 NN denotes shift
T12833 101-109 NN denotes mobility
T12832 85-100 JJ denotes electrophoretic
T12831 82-84 IN denotes by
T12830 69-81 VBN denotes investigated
T12829 65-68 VBD denotes was
T12828 63-64 -RRB- denotes )
T12827 60-63 CD denotes 192
T12826 59-60 NN denotes −
T12825 58-59 CD denotes /
T12824 55-58 CD denotes 203
T12823 54-55 FW denotes −
T12822 53-54 -LRB- denotes (
T12821 45-52 NN denotes element
T12820 39-44 NNP denotes C/EBP
T12819 30-38 JJ denotes putative
T12818 26-29 DT denotes the
T12817 23-25 TO denotes to
T12816 15-22 JJ denotes binding
T12815 8-14 NN denotes factor
T12814 0-7 NNP denotes Nuclear
R9478 T12814 T12815 compound Nuclear,factor
R9481 T12817 T12816 prep to,binding
R9482 T12818 T12821 det the,element
R9483 T12819 T12821 amod putative,element
R9484 T12820 T12821 compound C/EBP,element
R9485 T12821 T12817 pobj element,to
R9486 T12822 T12830 punct (,investigated
R9487 T12823 T12830 dep −,investigated
R9488 T12824 T12830 nsubjpass 203,investigated
R9489 T12825 T12830 nsubjpass /,investigated
R9490 T12826 T12830 nsubjpass −,investigated
R9491 T12827 T12826 nummod 192,−
R9492 T12828 T12826 punct ),−
R9493 T12829 T12830 auxpass was,investigated
R9494 T12830 T12821 acl investigated,element
R9495 T12831 T12830 agent by,investigated
R9496 T12832 T12835 amod electrophoretic,assay
R9497 T12833 T12834 compound mobility,shift
R9498 T12834 T12835 compound shift,assay
R9499 T12835 T12831 pobj assay,by
R9500 T12836 T12835 punct (,assay
R9501 T12837 T12839 nmod EMSA,using
R9502 T12838 T12839 punct ),using
R9503 T12839 T12835 parataxis using,assay
R9504 T12840 T12841 amod nuclear,extracts
R9505 T12841 T12839 dobj extracts,using
R9506 T12842 T12839 prep from,using
R9507 T12843 T12846 amod untreated,RAW
R9508 T12844 T12843 cc and,untreated
R9509 T12845 T12843 conj LPS-treated,untreated
R9510 T12846 T12842 pobj RAW,from
R9511 T12847 T12848 nummod 264.7,macrophages
R9512 T12848 T12842 pobj macrophages,from

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12477 193-204 NN denotes macrophages
T12476 187-192 CD denotes 264.7
T12475 183-186 NN denotes RAW
T12474 171-182 JJ denotes LPS-treated
T12473 167-170 CC denotes and
T12472 157-166 JJ denotes untreated
T12471 152-156 IN denotes from
T12470 143-151 NN denotes extracts
T12469 135-142 JJ denotes nuclear
T12468 129-134 VB denotes using
T12467 127-128 -RRB- denotes )
T12466 123-127 NN denotes EMSA
T12465 122-123 -LRB- denotes (
T12464 116-121 NN denotes assay
T12463 110-115 NN denotes shift
T12462 101-109 NN denotes mobility
T12461 85-100 JJ denotes electrophoretic
T12460 82-84 IN denotes by
T12459 69-81 VB denotes investigated
T12458 65-68 VB denotes was
T12457 63-64 -RRB- denotes )
T12456 54-63 NN denotes −203/−192
T12455 53-54 -LRB- denotes (
T12454 45-52 NN denotes element
T12453 39-44 NN denotes C/EBP
T12452 30-38 JJ denotes putative
T12451 26-29 DT denotes the
T12450 23-25 TO denotes to
T12449 15-22 VB denotes binding
T12448 8-14 NN denotes factor
T12447 0-7 JJ denotes Nuclear
R9180 T12448 T12447 arg1Of factor,Nuclear
R9181 T12448 T12449 arg1Of factor,binding
R9182 T12448 T12458 arg1Of factor,was
R9183 T12448 T12459 arg2Of factor,investigated
R9184 T12448 T12468 arg1Of factor,using
R9185 T12449 T12450 arg1Of binding,to
R9186 T12454 T12450 arg2Of element,to
R9187 T12454 T12451 arg1Of element,the
R9188 T12454 T12452 arg1Of element,putative
R9189 T12454 T12453 arg1Of element,C/EBP
R9190 T12454 T12455 arg1Of element,(
R9191 T12456 T12455 arg2Of −203/−192,(
R9192 T12457 T12455 arg3Of ),(
R9193 T12459 T12458 arg2Of investigated,was
R9194 T12459 T12468 modOf investigated,using
R9195 T12464 T12459 arg1Of assay,investigated
R9196 T12464 T12460 arg2Of assay,by
R9197 T12464 T12461 arg1Of assay,electrophoretic
R9198 T12464 T12462 arg1Of assay,mobility
R9199 T12464 T12463 arg1Of assay,shift
R9200 T12464 T12465 arg1Of assay,(
R9201 T12466 T12465 arg2Of EMSA,(
R9202 T12467 T12465 arg3Of ),(
R9203 T12470 T12468 arg2Of extracts,using
R9204 T12470 T12469 arg1Of extracts,nuclear
R9205 T12470 T12471 arg1Of extracts,from
R9206 T12472 T12473 arg1Of untreated,and
R9207 T12474 T12473 arg2Of LPS-treated,and
R9208 T12477 T12471 arg2Of macrophages,from
R9209 T12477 T12472 arg1Of macrophages,untreated
R9210 T12477 T12474 arg1Of macrophages,LPS-treated
R9211 T12477 T12475 arg1Of macrophages,RAW
R9212 T12477 T12476 arg1Of macrophages,264.7

GO-MF

Id Subject Object Predicate Lexical cue
T12419 15-22 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T12400 0-205 Sentence denotes Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages.
T172 0-205 Sentence denotes Nuclear factor binding to the putative C/EBP element (−203/−192) was investigated by electrophoretic mobility shift assay (EMSA) using nuclear extracts from untreated and LPS-treated RAW 264.7 macrophages.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T12790 157-204 Entity denotes untreated and LPS-treated RAW 264.7 macrophages
T12786 135-151 Entity denotes nuclear extracts
T12784 39-44 Protein denotes C/EBP
T12766 171-182 Entity denotes LPS-treated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T12722 15-22 Binding denotes binding
T12721 39-52 Protein denotes C/EBP element
R9439 T12721 T12722 themeOf C/EBP element,binding

testone

Id Subject Object Predicate Lexical cue
T12385 15-22 Binding denotes binding