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PMC:3589482 / 25706-26414 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T24139 706-707 . denotes .
T24138 695-706 NNS denotes experiments
T24137 683-694 JJ denotes independent
T24136 681-682 CD denotes 7
T24135 679-680 CD denotes 4
T24134 676-678 IN denotes of
T24133 672-675 NNP denotes SEM
T24132 668-671 CC denotes and
T24071 320-321 , denotes ,
T24070 313-320 NNS denotes primers
T24069 295-312 JJ denotes promoter-specific
T24131 663-667 NN denotes mean
T24130 659-662 DT denotes the
T24129 649-658 VB denotes represent
T24128 645-648 CC denotes and
T24127 635-644 NN denotes treatment
T24126 631-634 NNP denotes LPS
T24125 621-630 VBG denotes following
T24124 612-620 NN denotes activity
T24123 601-611 NN denotes luciferase
T24122 592-600 JJ denotes relative
T24121 587-591 VBP denotes show
T24120 579-586 NNS denotes results
T24119 575-578 DT denotes The
T24118 573-574 . denotes .
T24117 570-573 NNS denotes hrs
T24116 567-569 CD denotes 16
T24115 563-566 IN denotes for
T24114 559-562 NNP denotes LPS
T24113 553-558 JJ denotes ng/ml
T24112 549-552 CD denotes 100
T24111 544-548 IN denotes with
T24110 536-543 VBN denotes treated
T24109 533-535 CC denotes or
T24108 523-532 JJ denotes untreated
T24107 518-522 VBD denotes left
T24106 511-517 RB denotes either
T24105 507-510 CC denotes and
T24104 496-506 NNS denotes constructs
T24103 487-495 NN denotes reporter
T24102 467-486 JJ denotes promoter-luciferase
T24101 458-466 NNP denotes SerpinB2
T24100 451-457 NN denotes murine
T24099 441-450 VBN denotes indicated
T24098 437-440 DT denotes the
T24097 432-436 IN denotes with
T24096 420-431 VBN denotes transfected
T24095 408-419 RB denotes transiently
T24094 403-407 VBD denotes were
T24093 391-402 NNS denotes macrophages
T24092 385-390 CD denotes 264.7
T24091 381-384 NNP denotes RAW
T24090 379-380 -RRB- denotes )
T24089 378-379 NNP denotes B
T24088 377-378 -LRB- denotes (
T24087 375-376 . denotes .
T24086 366-375 VBN denotes indicated
T24085 362-365 VBP denotes are
T24084 355-361 NNS denotes assays
T24083 350-354 NNP denotes ChIP
T24082 347-349 IN denotes in
T24081 342-346 VBN denotes used
T24080 338-341 CD denotes +19
T24079 337-338 NN denotes /
T24078 336-337 CD denotes 5
T24077 335-336 CD denotes −
T24076 331-334 CC denotes and
T24075 327-330 CD denotes 315
T24074 326-327 NN denotes −
T24073 325-326 CD denotes /
T24072 322-325 CD denotes 338
T24068 286-294 JJ denotes proximal
T24067 277-285 CD denotes SerpinB2
T24066 270-276 NN denotes murine
T24065 267-269 IN denotes of
T24064 257-266 NNS denotes Positions
T24063 255-256 . denotes .
T24062 250-255 VBN denotes shown
T24061 245-249 RB denotes also
T24060 242-244 VBZ denotes is
T24059 231-241 NNS denotes constructs
T24058 222-230 NN denotes reporter
T24057 219-221 CD denotes 87
T24056 218-219 CD denotes −
T24055 214-217 CC denotes and
T24054 210-213 CD denotes 189
T24053 209-210 CD denotes −
T24052 207-208 , denotes ,
T24051 204-207 CD denotes 539
T24050 203-204 NN denotes −
T24049 199-202 DT denotes the
T24048 196-198 IN denotes of
T24047 191-195 NNS denotes ends
T24046 189-190 NN denotes ′
T24045 188-189 CD denotes 5
T24044 184-187 DT denotes the
T24043 181-183 IN denotes of
T24042 172-180 NN denotes location
T24041 168-171 DT denotes The
T24040 166-167 . denotes .
T24039 161-166 NNS denotes boxes
T24038 156-160 IN denotes with
T24037 146-155 VBD denotes indicated
T24036 137-145 NNS denotes elements
T24035 126-136 JJ denotes regulatory
T24034 115-125 JJ denotes cis-acting
T24033 105-114 NN denotes candidate
T24032 102-104 IN denotes of
T24031 93-101 NN denotes location
T24030 89-92 DT denotes the
T24029 84-88 IN denotes with
T24028 75-83 NN denotes promoter
T24027 66-74 NNP denotes SerpinB2
T24026 59-65 NN denotes murine
T24025 55-58 DT denotes the
T24024 52-54 IN denotes of
T24023 45-51 NN denotes region
T24022 41-44 CD denotes +92
T24021 40-41 NN denotes /
T24020 37-40 CD denotes 539
T24019 36-37 NN denotes −
T24018 32-35 DT denotes the
T24017 29-31 IN denotes of
T24016 14-28 NN denotes representation
T24015 4-13 JJ denotes Schematic
T24014 2-3 -RRB- denotes )
T24013 1-2 NN denotes A
T24012 0-1 -LRB- denotes (
R17254 T24012 T24013 punct (,A
R17255 T24013 T24016 nmod A,representation
R17256 T24014 T24013 punct ),A
R17257 T24015 T24016 amod Schematic,representation
R17258 T24016 T24037 nsubj representation,indicated
R17259 T24017 T24016 prep of,representation
R17260 T24018 T24023 det the,region
R17261 T24019 T24023 nmod −,region
R17262 T24020 T24019 nummod 539,−
R17263 T24021 T24023 amod /,region
R17264 T24022 T24023 nummod +92,region
R17265 T24023 T24017 pobj region,of
R17266 T24024 T24023 prep of,region
R17267 T24025 T24028 det the,promoter
R17268 T24026 T24028 compound murine,promoter
R17269 T24027 T24028 compound SerpinB2,promoter
R17270 T24028 T24024 pobj promoter,of
R17271 T24029 T24028 prep with,promoter
R17272 T24030 T24031 det the,location
R17273 T24031 T24029 pobj location,with
R17274 T24032 T24031 prep of,location
R17275 T24033 T24036 nmod candidate,elements
R17276 T24034 T24036 amod cis-acting,elements
R17277 T24035 T24036 amod regulatory,elements
R17278 T24036 T24032 pobj elements,of
R17279 T24037 T24037 ROOT indicated,indicated
R17280 T24038 T24037 prep with,indicated
R17281 T24039 T24038 pobj boxes,with
R17282 T24040 T24037 punct .,indicated
R17283 T24041 T24042 det The,location
R17284 T24042 T24062 nsubjpass location,shown
R17285 T24043 T24042 prep of,location
R17286 T24044 T24047 det the,ends
R17287 T24045 T24046 nummod 5,′
R17288 T24046 T24047 compound ′,ends
R17289 T24047 T24043 pobj ends,of
R17290 T24048 T24047 prep of,ends
R17291 T24049 T24050 det the,−
R17292 T24050 T24048 pobj −,of
R17293 T24051 T24050 nummod 539,−
R17294 T24052 T24042 punct ",",location
R17295 T24053 T24054 nummod −,189
R17296 T24054 T24042 conj 189,location
R17297 T24055 T24054 cc and,189
R17298 T24056 T24054 conj −,189
R17299 T24057 T24059 nummod 87,constructs
R17300 T24058 T24059 compound reporter,constructs
R17301 T24059 T24042 appos constructs,location
R17302 T24060 T24062 auxpass is,shown
R17303 T24061 T24062 advmod also,shown
R17304 T24062 T24062 ROOT shown,shown
R17305 T24063 T24062 punct .,shown
R17306 T24064 T24086 nsubjpass Positions,indicated
R17307 T24065 T24064 prep of,Positions
R17308 T24066 T24070 nmod murine,primers
R17309 T24067 T24066 nummod SerpinB2,murine
R17310 T24068 T24070 amod proximal,primers
R17311 T24069 T24070 amod promoter-specific,primers
R17312 T24070 T24065 pobj primers,of
R17313 T24071 T24086 punct ",",indicated
R17314 T24072 T24086 nsubjpass 338,indicated
R17315 T24073 T24086 nsubjpass /,indicated
R17316 T24074 T24086 nsubjpass −,indicated
R17317 T24075 T24074 nummod 315,−
R17318 T24076 T24074 cc and,−
R17319 T24077 T24080 nummod −,+19
R17320 T24078 T24079 nummod 5,/
R17321 T24079 T24080 compound /,+19
R17322 T24080 T24074 conj +19,−
R17323 T24081 T24080 acl used,+19
R17324 T24082 T24081 prep in,used
R17325 T24083 T24084 compound ChIP,assays
R17326 T24084 T24082 pobj assays,in
R17327 T24085 T24086 auxpass are,indicated
R17328 T24086 T24086 ROOT indicated,indicated
R17329 T24087 T24086 punct .,indicated
R17330 T24088 T24091 punct (,RAW
R17331 T24089 T24091 nmod B,RAW
R17332 T24090 T24091 punct ),RAW
R17333 T24091 T24096 nsubjpass RAW,transfected
R17334 T24092 T24091 nummod 264.7,RAW
R17335 T24093 T24096 nsubjpass macrophages,transfected
R17336 T24094 T24096 auxpass were,transfected
R17337 T24095 T24096 advmod transiently,transfected
R17338 T24096 T24096 ROOT transfected,transfected
R17339 T24097 T24096 prep with,transfected
R17340 T24098 T24104 det the,constructs
R17341 T24099 T24100 amod indicated,murine
R17342 T24100 T24104 compound murine,constructs
R17343 T24101 T24103 nmod SerpinB2,reporter
R17344 T24102 T24103 amod promoter-luciferase,reporter
R17345 T24103 T24104 compound reporter,constructs
R17346 T24104 T24097 pobj constructs,with
R17347 T24105 T24096 cc and,transfected
R17348 T24106 T24107 preconj either,left
R17349 T24107 T24096 conj left,transfected
R17350 T24108 T24107 oprd untreated,left
R17351 T24109 T24108 cc or,untreated
R17352 T24110 T24108 conj treated,untreated
R17353 T24111 T24110 prep with,treated
R17354 T24112 T24114 nummod 100,LPS
R17355 T24113 T24114 compound ng/ml,LPS
R17356 T24114 T24111 pobj LPS,with
R17357 T24115 T24110 prep for,treated
R17358 T24116 T24117 nummod 16,hrs
R17359 T24117 T24115 pobj hrs,for
R17360 T24118 T24096 punct .,transfected
R17361 T24119 T24120 det The,results
R17362 T24120 T24121 nsubj results,show
R17363 T24121 T24121 ROOT show,show
R17364 T24122 T24124 amod relative,activity
R17365 T24123 T24124 compound luciferase,activity
R17366 T24124 T24121 dobj activity,show
R17367 T24125 T24124 prep following,activity
R17368 T24126 T24127 compound LPS,treatment
R17369 T24127 T24125 pobj treatment,following
R17370 T24128 T24121 cc and,show
R17371 T24129 T24121 conj represent,show
R17372 T24130 T24131 det the,mean
R17373 T24131 T24129 dobj mean,represent
R17374 T24132 T24131 cc and,mean
R17375 T24133 T24131 conj SEM,mean
R17376 T24134 T24133 prep of,SEM
R17377 T24135 T24134 pobj 4,of
R17378 T24136 T24138 nummod 7,experiments
R17379 T24137 T24138 amod independent,experiments
R17380 T24138 T24133 appos experiments,SEM
R17381 T24139 T24121 punct .,show

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T23936 695-706 NN denotes experiments
T23935 683-694 JJ denotes independent
T23934 679-682 CD denotes 4–7
T23933 676-678 IN denotes of
T23932 672-675 NN denotes SEM
T23931 668-671 CC denotes and
T23930 663-667 NN denotes mean
T23929 659-662 DT denotes the
T23928 649-658 VB denotes represent
T23927 645-648 CC denotes and
T23926 635-644 NN denotes treatment
T23925 631-634 NN denotes LPS
T23924 621-630 VB denotes following
T23923 612-620 NN denotes activity
T23922 601-611 NN denotes luciferase
T23921 592-600 JJ denotes relative
T23920 587-591 VB denotes show
T23919 579-586 NN denotes results
T23918 575-578 DT denotes The
T23917 570-573 NN denotes hrs
T23916 567-569 CD denotes 16
T23915 563-566 IN denotes for
T23914 559-562 NN denotes LPS
T23913 553-558 NN denotes ng/ml
T23912 549-552 CD denotes 100
T23911 544-548 IN denotes with
T23910 536-543 VB denotes treated
T23909 533-535 CC denotes or
T23908 523-532 JJ denotes untreated
T23907 518-522 JJ denotes left
T23906 511-517 CC denotes either
T23905 507-510 CC denotes and
T23904 496-506 NN denotes constructs
T23903 487-495 NN denotes reporter
T23902 467-486 NN denotes promoter-luciferase
T23901 458-466 NN denotes SerpinB2
T23885 355-361 NN denotes assays
T23884 350-354 NN denotes ChIP
T23883 347-349 IN denotes in
T23882 342-346 VB denotes used
T23881 335-341 CD denotes −5/+19
T23880 331-334 CC denotes and
T23879 322-330 CD denotes 338/−315
T23878 320-321 -COMMA- denotes ,
T23877 313-320 NN denotes primers
T23876 295-312 JJ denotes promoter-specific
T23875 286-294 JJ denotes proximal
T23874 277-285 NN denotes SerpinB2
T23873 270-276 JJ denotes murine
T23872 267-269 IN denotes of
T23871 257-266 NN denotes Positions
T23870 250-255 VB denotes shown
T23869 245-249 RB denotes also
T23868 242-244 VB denotes is
T23867 231-241 NN denotes constructs
T23866 222-230 NN denotes reporter
T23865 218-221 CD denotes −87
T23864 214-217 CC denotes and
T23863 209-213 CD denotes −189
T23862 207-208 -COMMA- denotes ,
T23861 203-207 CD denotes −539
T23860 199-202 DT denotes the
T23859 196-198 IN denotes of
T23858 191-195 NN denotes ends
T23857 188-190 CD denotes 5′
T23856 184-187 DT denotes the
T23855 181-183 IN denotes of
T23854 172-180 NN denotes location
T23853 168-171 DT denotes The
T23852 161-166 NN denotes boxes
T23851 156-160 IN denotes with
T23850 146-155 VB denotes indicated
T23849 137-145 NN denotes elements
T23848 126-136 JJ denotes regulatory
T23847 115-125 JJ denotes cis-acting
T23846 105-114 NN denotes candidate
T23845 102-104 IN denotes of
T23844 93-101 NN denotes location
T23843 89-92 DT denotes the
T23842 84-88 IN denotes with
T23841 75-83 NN denotes promoter
T23840 66-74 NN denotes SerpinB2
T23839 59-65 JJ denotes murine
T23838 55-58 DT denotes the
T23837 52-54 IN denotes of
T23836 45-51 NN denotes region
T23835 36-44 NN denotes −539/+92
T23834 32-35 DT denotes the
T23833 29-31 IN denotes of
T23832 14-28 NN denotes representation
T23831 4-13 JJ denotes Schematic
T23830 2-3 -RRB- denotes )
T23829 1-2 NN denotes A
T23828 0-1 -LRB- denotes (
T23900 451-457 JJ denotes murine
T23899 441-450 VB denotes indicated
T23898 437-440 DT denotes the
T23897 432-436 IN denotes with
T23896 420-431 VB denotes transfected
T23895 408-419 RB denotes transiently
T23894 403-407 VB denotes were
T23893 391-402 NN denotes macrophages
T23892 385-390 CD denotes 264.7
T23891 381-384 NN denotes RAW
T23890 379-380 -RRB- denotes )
T23889 378-379 NN denotes B
T23888 377-378 -LRB- denotes (
T23887 366-376 VB denotes indicated.
T23886 362-365 VB denotes are
R17124 T23829 T23828 arg2Of A,(
R17125 T23830 T23828 arg3Of ),(
R17126 T23832 T23828 arg1Of representation,(
R17127 T23832 T23831 arg1Of representation,Schematic
R17128 T23832 T23833 arg1Of representation,of
R17129 T23832 T23842 arg1Of representation,with
R17130 T23836 T23833 arg2Of region,of
R17131 T23836 T23834 arg1Of region,the
R17132 T23836 T23835 arg1Of region,−539/+92
R17133 T23836 T23837 arg1Of region,of
R17134 T23841 T23837 arg2Of promoter,of
R17135 T23841 T23838 arg1Of promoter,the
R17136 T23841 T23839 arg1Of promoter,murine
R17137 T23841 T23840 arg1Of promoter,SerpinB2
R17138 T23844 T23842 arg2Of location,with
R17139 T23844 T23843 arg1Of location,the
R17140 T23844 T23845 arg1Of location,of
R17141 T23849 T23845 arg2Of elements,of
R17142 T23849 T23846 arg1Of elements,candidate
R17143 T23849 T23847 arg1Of elements,cis-acting
R17144 T23849 T23848 arg1Of elements,regulatory
R17145 T23849 T23850 arg2Of elements,indicated
R17146 T23850 T23851 arg1Of indicated,with
R17147 T23852 T23851 arg2Of boxes,with
R17148 T23854 T23853 arg1Of location,The
R17149 T23854 T23855 arg1Of location,of
R17150 T23854 T23868 arg1Of location,is
R17151 T23854 T23870 arg2Of location,shown
R17152 T23858 T23855 arg2Of ends,of
R17153 T23858 T23856 arg1Of ends,the
R17154 T23858 T23857 arg1Of ends,5′
R17155 T23858 T23859 arg1Of ends,of
R17156 T23863 T23864 arg1Of −189,and
R17157 T23865 T23864 arg2Of −87,and
R17158 T23867 T23859 arg2Of constructs,of
R17159 T23867 T23860 arg1Of constructs,the
R17160 T23867 T23861 arg1Of constructs,−539
R17161 T23867 T23862 arg1Of constructs,","
R17162 T23867 T23863 arg1Of constructs,−189
R17163 T23867 T23865 arg1Of constructs,−87
R17164 T23867 T23866 arg1Of constructs,reporter
R17165 T23870 T23868 arg2Of shown,is
R17166 T23870 T23869 arg1Of shown,also
R17167 T23871 T23872 arg1Of Positions,of
R17168 T23871 T23886 arg1Of Positions,are
R17169 T23871 T23887 arg2Of Positions,indicated.
R17170 T23877 T23872 arg2Of primers,of
R17171 T23877 T23873 arg1Of primers,murine
R17172 T23877 T23874 arg1Of primers,SerpinB2
R17173 T23877 T23875 arg1Of primers,proximal
R17174 T23877 T23876 arg1Of primers,promoter-specific
R17175 T23877 T23878 arg1Of primers,","
R17176 T23879 T23880 arg1Of 338/−315,and
R17177 T23880 T23878 arg2Of and,","
R17178 T23880 T23882 arg2Of and,used
R17179 T23881 T23880 arg2Of −5/+19,and
R17180 T23882 T23883 arg1Of used,in
R17181 T23885 T23883 arg2Of assays,in
R17182 T23885 T23884 arg1Of assays,ChIP
R17183 T23887 T23886 arg2Of indicated.,are
R17184 T23889 T23888 arg2Of B,(
R17185 T23890 T23888 arg3Of ),(
R17186 T23893 T23888 arg1Of macrophages,(
R17187 T23893 T23891 arg1Of macrophages,RAW
R17188 T23893 T23892 arg1Of macrophages,264.7
R17189 T23893 T23894 arg1Of macrophages,were
R17190 T23893 T23896 arg2Of macrophages,transfected
R17191 T23896 T23886 modOf transfected,are
R17192 T23896 T23894 arg2Of transfected,were
R17193 T23896 T23895 arg1Of transfected,transiently
R17194 T23896 T23897 arg1Of transfected,with
R17195 T23904 T23898 arg1Of constructs,the
R17196 T23904 T23899 arg2Of constructs,indicated
R17197 T23904 T23900 arg1Of constructs,murine
R17198 T23904 T23901 arg1Of constructs,SerpinB2
R17199 T23904 T23902 arg1Of constructs,promoter-luciferase
R17200 T23904 T23903 arg1Of constructs,reporter
R17201 T23904 T23905 arg1Of constructs,and
R17202 T23905 T23897 arg2Of and,with
R17203 T23908 T23906 arg1Of untreated,either
R17204 T23908 T23907 arg1Of untreated,left
R17205 T23908 T23909 arg1Of untreated,or
R17206 T23910 T23909 arg2Of treated,or
R17207 T23910 T23911 arg1Of treated,with
R17208 T23912 T23913 arg1Of 100,ng/ml
R17209 T23914 T23911 arg2Of LPS,with
R17210 T23914 T23912 arg1Of LPS,100
R17211 T23917 T23905 arg2Of hrs,and
R17212 T23917 T23908 arg1Of hrs,untreated
R17213 T23917 T23910 arg2Of hrs,treated
R17214 T23917 T23915 arg1Of hrs,for
R17215 T23917 T23916 arg1Of hrs,16
R17216 T23919 T23918 arg1Of results,The
R17217 T23919 T23920 arg1Of results,show
R17218 T23919 T23928 arg1Of results,represent
R17219 T23920 T23924 arg1Of show,following
R17220 T23920 T23927 arg1Of show,and
R17221 T23923 T23920 arg2Of activity,show
R17222 T23923 T23921 arg1Of activity,relative
R17223 T23923 T23922 arg1Of activity,luciferase
R17224 T23926 T23924 arg2Of treatment,following
R17225 T23926 T23925 arg1Of treatment,LPS
R17226 T23928 T23927 arg2Of represent,and
R17227 T23930 T23931 arg1Of mean,and
R17228 T23931 T23928 arg2Of and,represent
R17229 T23931 T23929 arg1Of and,the
R17230 T23931 T23933 arg1Of and,of
R17231 T23932 T23931 arg2Of SEM,and
R17232 T23936 T23933 arg2Of experiments,of
R17233 T23936 T23934 arg1Of experiments,4–7
R17234 T23936 T23935 arg1Of experiments,independent

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T23799 601-611 Protein denotes luciferase
T23798 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23797 277-285 Protein denotes SerpinB2
T23796 66-74 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T23954 601-611 http://www.uniprot.org/uniprot/P08659 denotes luciferase
T23953 476-486 http://www.uniprot.org/uniprot/P08659 denotes luciferase
T23952 458-466 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T23951 277-285 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T23950 66-74 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T23804 601-620 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity
T23803 601-620 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T23802 601-620 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T23801 601-620 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T23800 601-620 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity

GO-MF

Id Subject Object Predicate Lexical cue
T23809 601-620 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity
T23808 601-620 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T23807 601-620 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T23806 601-620 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T23805 601-620 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity

sentences

Id Subject Object Predicate Lexical cue
T23785 575-707 Sentence denotes The results show relative luciferase activity following LPS treatment and represent the mean and SEM of 4–7 independent experiments.
T23784 257-574 Sentence denotes Positions of murine SerpinB2 proximal promoter-specific primers, 338/−315 and −5/+19 used in ChIP assays are indicated. (B) RAW 264.7 macrophages were transiently transfected with the indicated murine SerpinB2 promoter-luciferase reporter constructs and either left untreated or treated with 100 ng/ml LPS for 16 hrs.
T23783 168-256 Sentence denotes The location of the 5′ ends of the −539, −189 and −87 reporter constructs is also shown.
T23782 0-167 Sentence denotes (A) Schematic representation of the −539/+92 region of the murine SerpinB2 promoter with the location of candidate cis-acting regulatory elements indicated with boxes.
T164 0-167 Sentence denotes (A) Schematic representation of the −539/+92 region of the murine SerpinB2 promoter with the location of candidate cis-acting regulatory elements indicated with boxes.
T165 168-256 Sentence denotes The location of the 5′ ends of the −539, −189 and −87 reporter constructs is also shown.
T166 257-574 Sentence denotes Positions of murine SerpinB2 proximal promoter-specific primers, 338/−315 and −5/+19 used in ChIP assays are indicated. (B) RAW 264.7 macrophages were transiently transfected with the indicated murine SerpinB2 promoter-luciferase reporter constructs and either left untreated or treated with 100 ng/ml LPS for 16 hrs.
T167 575-707 Sentence denotes The results show relative luciferase activity following LPS treatment and represent the mean and SEM of 4–7 independent experiments.

simple1

Id Subject Object Predicate Lexical cue
T23814 601-611 Protein denotes luciferase
T23813 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23812 277-285 Protein denotes SerpinB2
T23811 66-74 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T23946 601-611 Protein denotes luciferase
T23945 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23944 277-285 Protein denotes SerpinB2
T23943 66-74 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T23970 420-431 Gene_expression denotes transfected
T23969 601-611 Protein denotes luciferase
T23968 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23967 277-285 Protein denotes SerpinB2
T23966 66-74 Protein denotes SerpinB2
R17237 T23968 T23970 themeOf SerpinB2 promoter-luciferase reporter,transfected

DLUT931

Id Subject Object Predicate Lexical cue
T23959 601-611 Protein denotes luciferase
T23958 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23957 277-285 Protein denotes SerpinB2
T23956 66-74 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T23997 52-83 Entity denotes of the murine SerpinB2 promoter
T23996 277-285 Protein denotes SerpinB2
T23995 601-611 Protein denotes luciferase
T23994 350-361 Entity denotes ChIP assays
T23993 161-166 Entity denotes boxes
T23992 567-573 Protein denotes 16 hrs
T23990 267-361 Entity denotes of murine SerpinB2 proximal promoter-specific primers, 338/−315 and −5/+19 used in ChIP assays
T23988 267-361 Entity denotes of murine SerpinB2 proximal promoter-specific primers, 338/−315 and −5/+19 used in ChIP assays
T23987 115-118 Protein denotes cis
T23986 381-402 Entity denotes RAW 264.7 macrophages
T23985 553-573 Entity denotes ng/ml LPS for 16 hrs
T23984 66-74 Protein denotes SerpinB2
T23982 631-634 Entity denotes LPS
T23981 451-506 Protein denotes murine SerpinB2 promoter-luciferase reporter constructs
R17239 T23997 T23984 partOf of the murine SerpinB2 promoter,SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T23975 601-611 Protein denotes luciferase
T23974 476-486 Protein denotes luciferase
T23973 451-475 Protein denotes murine SerpinB2 promoter
T23972 59-83 Protein denotes murine SerpinB2 promoter

testone

Id Subject Object Predicate Lexical cue
T23769 601-611 Protein denotes luciferase
T23768 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23767 277-285 Protein denotes SerpinB2
T23766 66-74 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T23780 621-630 Positive_regulation denotes following
T23779 601-611 Protein denotes luciferase
T23778 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23777 277-285 Protein denotes SerpinB2
T23776 66-74 Protein denotes SerpinB2
T23774 601-611 Protein denotes luciferase
T23773 458-495 Protein denotes SerpinB2 promoter-luciferase reporter
T23772 277-285 Protein denotes SerpinB2
T23771 66-74 Protein denotes SerpinB2
R17106 T23779 T23780 themeOf luciferase,following