PMC:3589482 / 19748-20014
Annnotations
bionlp-st-ge-2016-spacy-parsed
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deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
pmc-enju-pas
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,{"id":"R7201","pred":"arg2Of","subj":"T9798","obj":"T9796"},{"id":"R7202","pred":"arg1Of","subj":"T9798","obj":"T9797"},{"id":"R7203","pred":"arg1Of","subj":"T9798","obj":"T9799"},{"id":"R7204","pred":"arg2Of","subj":"T9801","obj":"T9799"},{"id":"R7205","pred":"arg1Of","subj":"T9801","obj":"T9800"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T9525","span":{"begin":8,"end":16},"obj":"Antecedent"},{"id":"T9524","span":{"begin":252,"end":265},"obj":"Anaphor"}],"relations":[{"id":"R6961","pred":"boundBy","subj":"T9524","obj":"T9525"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T9533","span":{"begin":207,"end":215},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T9893","span":{"begin":207,"end":215},"obj":"http://www.uniprot.org/uniprot/P05120"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T9545","span":{"begin":113,"end":125},"obj":"http://purl.obolibrary.org/obo/GO_0032496"},{"id":"T9544","span":{"begin":43,"end":55},"obj":"http://purl.obolibrary.org/obo/GO_0032496"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
sentences
{"project":"sentences","denotations":[{"id":"T9475","span":{"begin":0,"end":266},"obj":"Sentence"},{"id":"T128","span":{"begin":0,"end":266},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
simple1
{"project":"simple1","denotations":[{"id":"T9561","span":{"begin":207,"end":215},"obj":"Protein"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T9883","span":{"begin":240,"end":248},"obj":"Regulation"},{"id":"T9882","span":{"begin":184,"end":192},"obj":"Positive_regulation"},{"id":"T9874","span":{"begin":207,"end":215},"obj":"Protein"}],"relations":[{"id":"R7268","pred":"themeOf","subj":"T9874","obj":"T9882"},{"id":"R7269","pred":"themeOf","subj":"T9874","obj":"T9883"},{"id":"R7274","pred":"themeOf","subj":"T9882","obj":"T9883"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T9933","span":{"begin":207,"end":215},"obj":"Protein"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T9913","span":{"begin":240,"end":248},"obj":"Regulation"},{"id":"T9907","span":{"begin":207,"end":215},"obj":"Protein"}],"relations":[{"id":"R7277","pred":"themeOf","subj":"T9907","obj":"T9913"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T10009","span":{"begin":228,"end":231},"obj":"Entity"},{"id":"T10006","span":{"begin":196,"end":224},"obj":"Entity"},{"id":"T9985","span":{"begin":207,"end":215},"obj":"Protein"},{"id":"T9983","span":{"begin":113,"end":116},"obj":"Entity"},{"id":"T9979","span":{"begin":39,"end":72},"obj":"Entity"},{"id":"T9975","span":{"begin":59,"end":71},"obj":"Entity"}],"relations":[{"id":"R7304","pred":"partOf","subj":"T10006","obj":"T9985"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T9951","span":{"begin":240,"end":248},"obj":"Regulation"},{"id":"T9950","span":{"begin":184,"end":192},"obj":"Positive_regulation"},{"id":"T9949","span":{"begin":200,"end":224},"obj":"Protein"}],"relations":[{"id":"R7286","pred":"themeOf","subj":"T9949","obj":"T9950"},{"id":"R7287","pred":"themeOf","subj":"T9950","obj":"T9951"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
testone
{"project":"testone","denotations":[{"id":"T9439","span":{"begin":207,"end":215},"obj":"Protein"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}
test3
{"project":"test3","denotations":[{"id":"T9452","span":{"begin":207,"end":215},"obj":"Protein"},{"id":"T9463","span":{"begin":207,"end":215},"obj":"Protein"}],"text":"Further deletion beyond −539 abolished the LPS-response of the promoter, indicating the presence of an essential LPS response element in the region between −539 and −189; however, the response of the murine SerpinB2 promoter to PMA is less affected by this deletion."}