PMC:3589482 / 18126-18620
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22652 | 493-494 | . | denotes | . |
T22651 | 486-493 | NN | denotes | control |
T22650 | 478-485 | VBG | denotes | loading |
T22649 | 476-477 | DT | denotes | a |
T22648 | 473-475 | IN | denotes | as |
T22647 | 467-472 | NNP | denotes | GAPDH |
T22646 | 463-466 | IN | denotes | for |
T22645 | 454-462 | VBN | denotes | reprobed |
T22644 | 450-453 | VBD | denotes | was |
T22643 | 445-449 | NNP | denotes | Blot |
T22642 | 443-444 | . | denotes | . |
T22641 | 436-443 | VBZ | denotes | lysates |
T22640 | 431-435 | NN | denotes | cell |
T22639 | 425-430 | JJ | denotes | whole |
T22638 | 422-424 | IN | denotes | in |
T22637 | 411-421 | NN | denotes | expression |
T22636 | 403-410 | NN | denotes | protein |
T22635 | 394-402 | CD | denotes | SerpinB2 |
T22634 | 391-393 | IN | denotes | of |
T22633 | 382-390 | NN | denotes | analysis |
T22632 | 371-381 | NNP | denotes | Immunoblot |
T22631 | 369-370 | -RRB- | denotes | ) |
T22630 | 368-369 | NNP | denotes | B |
T22629 | 367-368 | -LRB- | denotes | ( |
T22628 | 365-366 | . | denotes | . |
T22627 | 355-365 | NN | denotes | triplicate |
T22626 | 352-354 | IN | denotes | in |
T22625 | 342-351 | VBN | denotes | performed |
T22624 | 330-341 | NNS | denotes | experiments |
T22623 | 318-329 | JJ | denotes | independent |
T22622 | 314-317 | CD | denotes | two |
T22621 | 308-313 | JJS | denotes | least |
T22596 | 189-192 | CD | denotes | 100 |
T22595 | 184-188 | IN | denotes | with |
T22594 | 178-183 | NNS | denotes | times |
T22593 | 168-177 | JJ | denotes | indicated |
T22592 | 164-167 | DT | denotes | the |
T22591 | 160-163 | IN | denotes | for |
T22590 | 152-159 | VBN | denotes | treated |
T22589 | 147-151 | VBD | denotes | were |
T22588 | 135-146 | NNS | denotes | macrophages |
T22587 | 132-134 | CD | denotes | .7 |
T22586 | 126-132 | CD | denotes | RAW264 |
T22585 | 124-125 | . | denotes | . |
T22584 | 119-124 | NNS | denotes | cells |
T22583 | 108-118 | NN | denotes | macrophage |
T22582 | 101-107 | JJ | denotes | murine |
T22581 | 98-100 | IN | denotes | in |
T22580 | 87-97 | NN | denotes | expression |
T22579 | 79-86 | NN | denotes | protein |
T22578 | 75-78 | CC | denotes | and |
T22577 | 70-74 | NNP | denotes | mRNA |
T22576 | 61-69 | NNP | denotes | SerpinB2 |
T22575 | 58-60 | IN | denotes | of |
T22574 | 48-57 | NN | denotes | induction |
T22573 | 44-47 | NNP | denotes | LPS |
T22620 | 305-307 | IN | denotes | at |
T22619 | 302-304 | IN | denotes | of |
T22618 | 287-301 | NN | denotes | representative |
T22617 | 284-286 | VBZ | denotes | is |
T22616 | 279-283 | NN | denotes | plot |
T22615 | 275-278 | DT | denotes | The |
T22614 | 273-274 | . | denotes | . |
T22613 | 266-273 | VB | denotes | β-actin |
T22612 | 263-265 | TO | denotes | to |
T22611 | 254-262 | JJ | denotes | relative |
T22610 | 252-253 | , | denotes | , |
T22609 | 246-252 | NNS | denotes | levels |
T22608 | 241-245 | NNP | denotes | mRNA |
T22607 | 232-240 | NNP | denotes | SerpinB2 |
T22606 | 225-231 | JJ | denotes | murine |
T22605 | 222-224 | IN | denotes | of |
T22604 | 213-221 | NN | denotes | analysis |
T22603 | 208-212 | NNP | denotes | qPCR |
T22602 | 206-207 | -RRB- | denotes | ) |
T22601 | 205-206 | NNP | denotes | A |
T22600 | 204-205 | -LRB- | denotes | ( |
T22599 | 202-203 | . | denotes | . |
T22598 | 199-202 | NNP | denotes | LPS |
T22597 | 193-198 | JJ | denotes | ng/ml |
R16266 | T22573 | T22574 | compound | LPS,induction |
R16267 | T22574 | T22580 | nmod | induction,expression |
R16268 | T22575 | T22574 | prep | of,induction |
R16269 | T22576 | T22577 | compound | SerpinB2,mRNA |
R16270 | T22577 | T22575 | pobj | mRNA,of |
R16271 | T22578 | T22577 | cc | and,mRNA |
R16272 | T22579 | T22580 | compound | protein,expression |
R16273 | T22580 | T22580 | ROOT | expression,expression |
R16274 | T22581 | T22580 | prep | in,expression |
R16275 | T22582 | T22584 | amod | murine,cells |
R16276 | T22583 | T22584 | compound | macrophage,cells |
R16277 | T22584 | T22581 | pobj | cells,in |
R16278 | T22585 | T22580 | punct | .,expression |
R16279 | T22586 | T22588 | nummod | RAW264,macrophages |
R16280 | T22587 | T22588 | nummod | .7,macrophages |
R16281 | T22588 | T22590 | nsubjpass | macrophages,treated |
R16282 | T22589 | T22590 | auxpass | were,treated |
R16283 | T22590 | T22590 | ROOT | treated,treated |
R16284 | T22591 | T22590 | prep | for,treated |
R16285 | T22592 | T22594 | det | the,times |
R16286 | T22593 | T22594 | amod | indicated,times |
R16287 | T22594 | T22591 | pobj | times,for |
R16288 | T22595 | T22590 | prep | with,treated |
R16289 | T22596 | T22598 | nummod | 100,LPS |
R16290 | T22597 | T22598 | amod | ng/ml,LPS |
R16291 | T22598 | T22595 | pobj | LPS,with |
R16292 | T22599 | T22590 | punct | .,treated |
R16293 | T22600 | T22604 | punct | (,analysis |
R16294 | T22601 | T22604 | det | A,analysis |
R16295 | T22602 | T22603 | punct | ),qPCR |
R16296 | T22603 | T22604 | compound | qPCR,analysis |
R16297 | T22604 | T22604 | ROOT | analysis,analysis |
R16298 | T22605 | T22604 | prep | of,analysis |
R16299 | T22606 | T22609 | amod | murine,levels |
R16300 | T22607 | T22608 | compound | SerpinB2,mRNA |
R16301 | T22608 | T22609 | compound | mRNA,levels |
R16302 | T22609 | T22605 | pobj | levels,of |
R16303 | T22610 | T22604 | punct | ",",analysis |
R16304 | T22611 | T22604 | amod | relative,analysis |
R16305 | T22612 | T22611 | prep | to,relative |
R16306 | T22613 | T22612 | pobj | β-actin,to |
R16307 | T22614 | T22604 | punct | .,analysis |
R16308 | T22615 | T22616 | det | The,plot |
R16309 | T22616 | T22617 | nsubj | plot,is |
R16310 | T22617 | T22617 | ROOT | is,is |
R16311 | T22618 | T22617 | attr | representative,is |
R16312 | T22619 | T22618 | prep | of,representative |
R16313 | T22620 | T22621 | advmod | at,least |
R16314 | T22621 | T22622 | advmod | least,two |
R16315 | T22622 | T22624 | nummod | two,experiments |
R16316 | T22623 | T22624 | amod | independent,experiments |
R16317 | T22624 | T22619 | pobj | experiments,of |
R16318 | T22625 | T22624 | acl | performed,experiments |
R16319 | T22626 | T22625 | prep | in,performed |
R16320 | T22627 | T22626 | pobj | triplicate,in |
R16321 | T22628 | T22617 | punct | .,is |
R16322 | T22629 | T22633 | punct | (,analysis |
R16323 | T22630 | T22633 | nmod | B,analysis |
R16324 | T22631 | T22630 | punct | ),B |
R16325 | T22632 | T22633 | compound | Immunoblot,analysis |
R16326 | T22633 | T22641 | nsubj | analysis,lysates |
R16327 | T22634 | T22633 | prep | of,analysis |
R16328 | T22635 | T22637 | nummod | SerpinB2,expression |
R16329 | T22636 | T22637 | compound | protein,expression |
R16330 | T22637 | T22634 | pobj | expression,of |
R16331 | T22638 | T22637 | prep | in,expression |
R16332 | T22639 | T22640 | amod | whole,cell |
R16333 | T22640 | T22641 | compound | cell,lysates |
R16334 | T22641 | T22641 | ROOT | lysates,lysates |
R16335 | T22642 | T22641 | punct | .,lysates |
R16336 | T22643 | T22645 | nsubjpass | Blot,reprobed |
R16337 | T22644 | T22645 | auxpass | was,reprobed |
R16338 | T22645 | T22645 | ROOT | reprobed,reprobed |
R16339 | T22646 | T22645 | prep | for,reprobed |
R16340 | T22647 | T22646 | pobj | GAPDH,for |
R16341 | T22648 | T22645 | prep | as,reprobed |
R16342 | T22649 | T22651 | det | a,control |
R16343 | T22650 | T22651 | compound | loading,control |
R16344 | T22651 | T22648 | pobj | control,as |
R16345 | T22652 | T22645 | punct | .,reprobed |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22492 | 486-493 | NN | denotes | control |
T22491 | 478-485 | NN | denotes | loading |
T22490 | 476-477 | DT | denotes | a |
T22489 | 473-475 | IN | denotes | as |
T22488 | 467-472 | NN | denotes | GAPDH |
T22487 | 463-466 | IN | denotes | for |
T22486 | 454-462 | VB | denotes | reprobed |
T22485 | 450-453 | VB | denotes | was |
T22484 | 445-449 | NN | denotes | Blot |
T22483 | 436-443 | NN | denotes | lysates |
T22482 | 431-435 | NN | denotes | cell |
T22481 | 425-430 | JJ | denotes | whole |
T22480 | 422-424 | IN | denotes | in |
T22479 | 411-421 | NN | denotes | expression |
T22478 | 403-410 | NN | denotes | protein |
T22477 | 394-402 | NN | denotes | SerpinB2 |
T22476 | 391-393 | IN | denotes | of |
T22475 | 382-390 | NN | denotes | analysis |
T22474 | 371-381 | NN | denotes | Immunoblot |
T22473 | 369-370 | -RRB- | denotes | ) |
T22472 | 368-369 | NN | denotes | B |
T22471 | 367-368 | -LRB- | denotes | ( |
T22470 | 355-366 | FW | denotes | triplicate. |
T22469 | 352-354 | IN | denotes | in |
T22468 | 342-351 | VB | denotes | performed |
T22467 | 330-341 | NN | denotes | experiments |
T22466 | 318-329 | JJ | denotes | independent |
T22465 | 314-317 | CD | denotes | two |
T22464 | 308-313 | JJ | denotes | least |
T22463 | 305-307 | IN | denotes | at |
T22462 | 302-304 | IN | denotes | of |
T22461 | 287-301 | JJ | denotes | representative |
T22460 | 284-286 | VB | denotes | is |
T22459 | 279-283 | NN | denotes | plot |
T22458 | 275-278 | DT | denotes | The |
T22457 | 266-273 | NN | denotes | β-actin |
T22456 | 263-265 | TO | denotes | to |
T22455 | 254-262 | JJ | denotes | relative |
T22454 | 252-253 | -COMMA- | denotes | , |
T22453 | 246-252 | NN | denotes | levels |
T22452 | 241-245 | NN | denotes | mRNA |
T22451 | 232-240 | NN | denotes | SerpinB2 |
T22450 | 225-231 | JJ | denotes | murine |
T22449 | 222-224 | IN | denotes | of |
T22448 | 213-221 | NN | denotes | analysis |
T22447 | 208-212 | NN | denotes | qPCR |
T22446 | 206-207 | -RRB- | denotes | ) |
T22445 | 205-206 | NN | denotes | A |
T22444 | 204-205 | -LRB- | denotes | ( |
T22443 | 199-203 | NN | denotes | LPS. |
T22442 | 193-198 | NN | denotes | ng/ml |
T22441 | 189-192 | CD | denotes | 100 |
T22440 | 184-188 | IN | denotes | with |
T22439 | 178-183 | NN | denotes | times |
T22438 | 168-177 | VB | denotes | indicated |
T22437 | 164-167 | DT | denotes | the |
T22436 | 160-163 | IN | denotes | for |
T22435 | 152-159 | VB | denotes | treated |
T22434 | 147-151 | VB | denotes | were |
T22433 | 135-146 | NN | denotes | macrophages |
T22432 | 126-134 | NN | denotes | RAW264.7 |
T22431 | 119-124 | NN | denotes | cells |
T22430 | 108-118 | NN | denotes | macrophage |
T22429 | 101-107 | JJ | denotes | murine |
T22428 | 98-100 | IN | denotes | in |
T22427 | 87-97 | NN | denotes | expression |
T22426 | 79-86 | NN | denotes | protein |
T22425 | 75-78 | CC | denotes | and |
T22424 | 70-74 | NN | denotes | mRNA |
T22423 | 61-69 | NN | denotes | SerpinB2 |
T22422 | 58-60 | IN | denotes | of |
T22421 | 48-57 | NN | denotes | induction |
T22420 | 44-47 | NN | denotes | LPS |
R16169 | T22421 | T22420 | arg1Of | induction,LPS |
R16170 | T22421 | T22422 | arg1Of | induction,of |
R16171 | T22421 | T22428 | arg1Of | induction,in |
R16172 | T22424 | T22423 | arg1Of | mRNA,SerpinB2 |
R16173 | T22424 | T22425 | arg1Of | mRNA,and |
R16174 | T22425 | T22422 | arg2Of | and,of |
R16175 | T22427 | T22425 | arg2Of | expression,and |
R16176 | T22427 | T22426 | arg1Of | expression,protein |
R16177 | T22431 | T22428 | arg2Of | cells,in |
R16178 | T22431 | T22429 | arg1Of | cells,murine |
R16179 | T22431 | T22430 | arg1Of | cells,macrophage |
R16180 | T22433 | T22432 | arg1Of | macrophages,RAW264.7 |
R16181 | T22433 | T22434 | arg1Of | macrophages,were |
R16182 | T22433 | T22435 | arg2Of | macrophages,treated |
R16183 | T22435 | T22434 | arg2Of | treated,were |
R16184 | T22435 | T22436 | arg1Of | treated,for |
R16185 | T22438 | T22439 | arg1Of | indicated,times |
R16186 | T22439 | T22440 | arg1Of | times,with |
R16187 | T22441 | T22442 | arg1Of | 100,ng/ml |
R16188 | T22443 | T22440 | arg2Of | LPS.,with |
R16189 | T22443 | T22441 | arg1Of | LPS.,100 |
R16190 | T22443 | T22444 | arg1Of | LPS.,( |
R16191 | T22445 | T22444 | arg2Of | A,( |
R16192 | T22446 | T22444 | arg3Of | ),( |
R16193 | T22448 | T22436 | arg2Of | analysis,for |
R16194 | T22448 | T22437 | arg1Of | analysis,the |
R16195 | T22448 | T22438 | arg2Of | analysis,indicated |
R16196 | T22448 | T22447 | arg1Of | analysis,qPCR |
R16197 | T22448 | T22449 | arg1Of | analysis,of |
R16198 | T22453 | T22449 | arg2Of | levels,of |
R16199 | T22453 | T22450 | arg1Of | levels,murine |
R16200 | T22453 | T22451 | arg1Of | levels,SerpinB2 |
R16201 | T22453 | T22452 | arg1Of | levels,mRNA |
R16202 | T22453 | T22454 | arg1Of | levels,"," |
R16203 | T22453 | T22455 | arg1Of | levels,relative |
R16204 | T22455 | T22456 | arg1Of | relative,to |
R16205 | T22457 | T22456 | arg2Of | β-actin,to |
R16206 | T22459 | T22458 | arg1Of | plot,The |
R16207 | T22459 | T22460 | arg1Of | plot,is |
R16208 | T22459 | T22461 | arg1Of | plot,representative |
R16209 | T22461 | T22460 | arg2Of | representative,is |
R16210 | T22461 | T22462 | arg1Of | representative,of |
R16211 | T22465 | T22463 | arg1Of | two,at |
R16212 | T22465 | T22464 | arg1Of | two,least |
R16213 | T22467 | T22462 | arg2Of | experiments,of |
R16214 | T22467 | T22465 | arg1Of | experiments,two |
R16215 | T22467 | T22466 | arg1Of | experiments,independent |
R16216 | T22467 | T22468 | arg2Of | experiments,performed |
R16217 | T22468 | T22469 | arg1Of | performed,in |
R16218 | T22472 | T22471 | arg2Of | B,( |
R16219 | T22473 | T22471 | arg3Of | ),( |
R16220 | T22475 | T22469 | arg2Of | analysis,in |
R16221 | T22475 | T22470 | arg1Of | analysis,triplicate. |
R16222 | T22475 | T22471 | arg1Of | analysis,( |
R16223 | T22475 | T22474 | arg1Of | analysis,Immunoblot |
R16224 | T22475 | T22476 | arg1Of | analysis,of |
R16225 | T22479 | T22476 | arg2Of | expression,of |
R16226 | T22479 | T22477 | arg1Of | expression,SerpinB2 |
R16227 | T22479 | T22478 | arg1Of | expression,protein |
R16228 | T22479 | T22480 | arg1Of | expression,in |
R16229 | T22483 | T22480 | arg2Of | lysates,in |
R16230 | T22483 | T22481 | arg1Of | lysates,whole |
R16231 | T22483 | T22482 | arg1Of | lysates,cell |
R16232 | T22484 | T22485 | arg1Of | Blot,was |
R16233 | T22484 | T22486 | arg2Of | Blot,reprobed |
R16234 | T22486 | T22485 | arg2Of | reprobed,was |
R16235 | T22486 | T22487 | arg1Of | reprobed,for |
R16236 | T22486 | T22489 | arg1Of | reprobed,as |
R16237 | T22488 | T22487 | arg2Of | GAPDH,for |
R16238 | T22492 | T22489 | arg2Of | control,as |
R16239 | T22492 | T22490 | arg1Of | control,a |
R16240 | T22492 | T22491 | arg1Of | control,loading |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22412 | 467-472 | Protein | denotes | GAPDH |
T22411 | 394-402 | Protein | denotes | SerpinB2 |
T22410 | 266-273 | Protein | denotes | β-actin |
T22409 | 232-240 | Protein | denotes | SerpinB2 |
T22408 | 61-69 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22511 | 467-472 | http://www.uniprot.org/uniprot/P04406 | denotes | GAPDH |
T22510 | 266-273 | http://www.uniprot.org/uniprot/P60709 | denotes | β-actin |
T22509 | 394-402 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T22508 | 232-240 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T22507 | 61-69 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22414 | 431-435 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T22413 | 119-124 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22399 | 445-494 | Sentence | denotes | Blot was reprobed for GAPDH as a loading control. |
T22398 | 275-444 | Sentence | denotes | The plot is representative of at least two independent experiments performed in triplicate. (B) Immunoblot analysis of SerpinB2 protein expression in whole cell lysates. |
T22397 | 126-274 | Sentence | denotes | RAW264.7 macrophages were treated for the indicated times with 100 ng/ml LPS. (A) qPCR analysis of murine SerpinB2 mRNA levels, relative to β-actin. |
T22396 | 44-125 | Sentence | denotes | LPS induction of SerpinB2 mRNA and protein expression in murine macrophage cells. |
T118 | 0-125 | Sentence | denotes | 10.1371/journal.pone.0057855.g001 Figure 1 LPS induction of SerpinB2 mRNA and protein expression in murine macrophage cells. |
T119 | 126-274 | Sentence | denotes | RAW264.7 macrophages were treated for the indicated times with 100 ng/ml LPS. (A) qPCR analysis of murine SerpinB2 mRNA levels, relative to β-actin. |
T120 | 275-444 | Sentence | denotes | The plot is representative of at least two independent experiments performed in triplicate. (B) Immunoblot analysis of SerpinB2 protein expression in whole cell lysates. |
T121 | 445-494 | Sentence | denotes | Blot was reprobed for GAPDH as a loading control. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22419 | 467-472 | Protein | denotes | GAPDH |
T22418 | 394-402 | Protein | denotes | SerpinB2 |
T22417 | 266-273 | Protein | denotes | β-actin |
T22416 | 232-240 | Protein | denotes | SerpinB2 |
T22415 | 61-69 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22506 | 411-421 | Gene_expression | denotes | expression |
T22505 | 246-252 | Transcription | denotes | levels |
T22504 | 87-97 | Gene_expression | denotes | expression |
T22503 | 48-57 | Positive_regulation | denotes | induction |
T22502 | 467-472 | Protein | denotes | GAPDH |
T22501 | 394-402 | Protein | denotes | SerpinB2 |
T22500 | 266-273 | Protein | denotes | β-actin |
T22499 | 232-240 | Protein | denotes | SerpinB2 |
T22498 | 61-69 | Protein | denotes | SerpinB2 |
R16241 | T22498 | T22503 | themeOf | SerpinB2,induction |
R16242 | T22498 | T22504 | themeOf | SerpinB2,expression |
R16243 | T22499 | T22505 | themeOf | SerpinB2,levels |
R16244 | T22501 | T22506 | themeOf | SerpinB2,expression |
R16245 | T22504 | T22503 | themeOf | expression,induction |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22534 | 411-421 | Gene_expression | denotes | expression |
T22533 | 48-57 | Positive_regulation | denotes | induction |
T22532 | 87-97 | Gene_expression | denotes | expression |
T22531 | 467-472 | Protein | denotes | GAPDH |
T22530 | 394-402 | Protein | denotes | SerpinB2 |
T22529 | 266-273 | Protein | denotes | β-actin |
T22528 | 232-240 | Protein | denotes | SerpinB2 |
T22527 | 61-69 | Protein | denotes | SerpinB2 |
R16252 | T22527 | T22533 | themeOf | SerpinB2,induction |
R16253 | T22527 | T22532 | themeOf | SerpinB2,expression |
R16254 | T22530 | T22534 | themeOf | SerpinB2,expression |
R16255 | T22532 | T22533 | themeOf | expression,induction |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22519 | 411-421 | Gene_expression | denotes | expression |
T22518 | 87-97 | Gene_expression | denotes | expression |
T22517 | 48-57 | Positive_regulation | denotes | induction |
T22516 | 467-472 | Protein | denotes | GAPDH |
T22515 | 394-402 | Protein | denotes | SerpinB2 |
T22514 | 266-273 | Protein | denotes | β-actin |
T22513 | 232-240 | Protein | denotes | SerpinB2 |
T22512 | 61-69 | Protein | denotes | SerpinB2 |
R16246 | T22512 | T22517 | themeOf | SerpinB2,induction |
R16247 | T22512 | T22518 | themeOf | SerpinB2,expression |
R16248 | T22515 | T22519 | themeOf | SerpinB2,expression |
R16249 | T22518 | T22517 | themeOf | expression,induction |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22572 | 79-97 | Gene_expression | denotes | protein expression |
T22571 | 382-443 | Gene_expression | denotes | analysis of SerpinB2 protein expression in whole cell lysates |
T22570 | 476-493 | Regulation | denotes | a loading control |
T22569 | 61-74 | Protein | denotes | SerpinB2 mRNA |
T22568 | 108-118 | Entity | denotes | macrophage |
T22567 | 126-146 | Entity | denotes | RAW264.7 macrophages |
T22566 | 208-212 | Protein | denotes | qPCR |
T22565 | 193-202 | Entity | denotes | ng/ml LPS |
T22564 | 101-124 | Entity | denotes | murine macrophage cells |
T22563 | 467-472 | Protein | denotes | GAPDH |
T22562 | 241-245 | Protein | denotes | mRNA |
T22561 | 222-253 | Protein | denotes | of murine SerpinB2 mRNA levels, |
T22560 | 394-402 | Protein | denotes | SerpinB2 |
T22559 | 44-47 | Entity | denotes | LPS |
T22558 | 79-86 | Protein | denotes | protein |
T22557 | 266-273 | Protein | denotes | β-actin |
T22556 | 61-69 | Protein | denotes | SerpinB2 |
T22555 | 394-410 | Protein | denotes | SerpinB2 protein |
R16264 | T22555 | T22571 | themeOf | SerpinB2 protein,analysis of SerpinB2 protein expression in whole cell lysates |
R16265 | T22558 | T22572 | themeOf | protein,protein expression |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22544 | 467-472 | Protein | denotes | GAPDH |
T22543 | 445-449 | Protein | denotes | Blot |
T22542 | 411-421 | Gene_expression | denotes | expression |
T22541 | 394-410 | Protein | denotes | SerpinB2 protein |
T22540 | 266-273 | Protein | denotes | β-actin |
T22539 | 232-245 | Protein | denotes | SerpinB2 mRNA |
T22538 | 48-57 | Positive_regulation | denotes | induction |
T22537 | 87-97 | Gene_expression | denotes | expression |
T22536 | 48-57 | Positive_regulation | denotes | induction |
T22535 | 61-74 | Protein | denotes | SerpinB2 mRNA |
R16256 | T22535 | T22536 | themeOf | SerpinB2 mRNA,induction |
R16257 | T22535 | T22537 | themeOf | SerpinB2 mRNA,expression |
R16258 | T22537 | T22538 | themeOf | expression,induction |
R16259 | T22541 | T22542 | themeOf | SerpinB2 protein,expression |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22382 | 411-421 | Gene_expression | denotes | expression |
T22381 | 87-97 | Gene_expression | denotes | expression |
T22380 | 48-57 | Positive_regulation | denotes | induction |
T22379 | 467-472 | Protein | denotes | GAPDH |
T22378 | 394-402 | Protein | denotes | SerpinB2 |
T22377 | 266-273 | Protein | denotes | β-actin |
T22376 | 232-240 | Protein | denotes | SerpinB2 |
T22375 | 61-69 | Protein | denotes | SerpinB2 |
R16160 | T22375 | T22380 | themeOf | SerpinB2,induction |
R16161 | T22378 | T22382 | themeOf | SerpinB2,expression |
R16162 | T22381 | T22380 | themeOf | expression,induction |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22395 | 467-472 | Protein | denotes | GAPDH |
T22394 | 411-421 | Gene_expression | denotes | expression |
T22393 | 394-402 | Protein | denotes | SerpinB2 |
T22392 | 266-273 | Protein | denotes | β-actin |
T22391 | 232-240 | Protein | denotes | SerpinB2 |
T22390 | 87-97 | Gene_expression | denotes | expression |
T22389 | 61-69 | Protein | denotes | SerpinB2 |
T22388 | 48-57 | Positive_regulation | denotes | induction |
T22387 | 467-472 | Protein | denotes | GAPDH |
T22386 | 394-402 | Protein | denotes | SerpinB2 |
T22385 | 266-273 | Protein | denotes | β-actin |
T22384 | 232-240 | Protein | denotes | SerpinB2 |
T22383 | 61-69 | Protein | denotes | SerpinB2 |
R16163 | T22389 | T22390 | themeOf | SerpinB2,expression |
R16164 | T22390 | T22388 | themeOf | expression,induction |
R16165 | T22393 | T22394 | themeOf | SerpinB2,expression |