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PMC:3586680 / 3911-4029 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T854 73-83 Gene_expression denotes expression
T853 60-64 Protein denotes MGMT
T852 15-19 Protein denotes MGMT
T851 3-11 Positive_regulation denotes increase
T821 60-64 Protein denotes MGMT
T820 15-19 Protein denotes MGMT
R460 T853 T854 themeOf MGMT,expression

testone

Id Subject Object Predicate Lexical cue
T785 60-64 Protein denotes MGMT
T784 15-19 Protein denotes MGMT
T804 73-83 Gene_expression denotes expression
R449 T785 T804 themeOf MGMT,expression

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2288 53-59 Negative_regulation denotes blocks
T2287 73-83 Gene_expression denotes expression
T2286 3-11 Positive_regulation denotes increase
T2285 60-72 Protein denotes MGMT protein
T2284 15-19 Protein denotes MGMT
R1533 T2284 T2286 themeOf MGMT,increase
R1534 T2285 T2287 themeOf MGMT protein,expression
R1537 T2287 T2288 themeOf expression,blocks

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3063 117-118 . denotes .
T3062 109-117 NN denotes survival
T3061 101-108 NN denotes patient
T3060 94-100 NN denotes cancer
T3059 85-93 VBZ denotes prolongs
T3058 83-84 , denotes ,
T3057 73-83 NN denotes expression
T3056 65-72 NN denotes protein
T3055 60-64 NNP denotes MGMT
T3054 53-59 VBZ denotes blocks
T3053 47-52 WDT denotes which
T3052 45-46 , denotes ,
T3051 34-45 NN denotes methylation
T3050 25-33 NN denotes promoter
T3049 20-24 NN denotes gene
T3048 15-19 NNP denotes MGMT
T3047 12-14 IN denotes in
T3046 3-11 NN denotes increase
T3045 0-2 DT denotes An
R2079 T3055 T3057 compound MGMT,expression
R2085 T3056 T3057 compound protein,expression
R2089 T3057 T3054 dobj expression,blocks
R2093 T3058 T3059 punct ",",prolongs
R2097 T3059 T3059 ROOT prolongs,prolongs
R2099 T3060 T3062 compound cancer,survival
R2100 T3061 T3062 compound patient,survival
R2103 T3062 T3059 dobj survival,prolongs
R2110 T3063 T3059 punct .,prolongs
R2132 T3045 T3046 det An,increase
R2134 T3046 T3059 nsubj increase,prolongs
R2135 T3047 T3046 prep in,increase
R2136 T3048 T3051 compound MGMT,methylation
R2138 T3049 T3050 compound gene,promoter
R2139 T3050 T3051 compound promoter,methylation
R2140 T3051 T3047 pobj methylation,in
R2142 T3052 T3051 punct ",",methylation
R2143 T3053 T3054 nsubj which,blocks
R2144 T3054 T3051 relcl blocks,methylation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2502 47-84 Negative_regulation denotes which blocks MGMT protein expression,
T2501 0-46 Positive_regulation denotes An increase in MGMT gene promoter methylation,
T2496 60-84 Gene_expression denotes MGMT protein expression,
T2482 60-64 Protein denotes MGMT
T2443 12-46 Protein denotes in MGMT gene promoter methylation,
T2437 15-19 Protein denotes MGMT
T2409 25-33 Entity denotes promoter
T2388 60-72 Protein denotes MGMT protein
R1563 T2388 T2496 themeOf MGMT protein,"MGMT protein expression,"
R1574 T2496 T2502 themeOf "MGMT protein expression,","which blocks MGMT protein expression,"

DLUT931

Id Subject Object Predicate Lexical cue
T2193 53-59 Negative_regulation denotes blocks
T2192 73-83 Gene_expression denotes expression
T2191 3-11 Positive_regulation denotes increase
T2169 60-64 Protein denotes MGMT
T2168 15-19 Protein denotes MGMT
R1495 T2168 T2191 themeOf MGMT,increase
R1496 T2169 T2192 themeOf MGMT,expression
R1507 T2192 T2193 themeOf expression,blocks

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2245 60-64 Protein denotes MGMT
T2244 15-19 Protein denotes MGMT
T2264 53-59 Negative_regulation denotes blocks
T2263 73-83 Gene_expression denotes expression
R1524 T2245 T2263 themeOf MGMT,expression
R1543 T2263 T2264 themeOf expression,blocks

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2130 53-59 Negative_regulation denotes blocks
T2129 73-83 Gene_expression denotes expression
T2111 60-64 Protein denotes MGMT
T2110 15-19 Protein denotes MGMT
R1478 T2111 T2129 themeOf MGMT,expression
R1490 T2129 T2130 themeOf expression,blocks

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2153 60-64 http://www.uniprot.org/uniprot/P16455 denotes MGMT
T2152 15-19 http://www.uniprot.org/uniprot/P16455 denotes MGMT

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1952 60-64 Protein denotes MGMT
T1951 15-19 Protein denotes MGMT

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T1940 34-45 Antecedent denotes methylation
T1939 47-52 Anaphor denotes which
R1455 T1939 T1940 boundBy which,methylation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1450 109-117 NN denotes survival
T1449 101-108 NN denotes patient
T1448 94-100 NN denotes cancer
T1447 85-93 VB denotes prolongs
T1446 83-84 -COMMA- denotes ,
T1445 73-83 NN denotes expression
T1444 65-72 NN denotes protein
T1443 60-64 NN denotes MGMT
T1442 53-59 VB denotes blocks
T1441 47-52 WDT denotes which
T1440 45-46 -COMMA- denotes ,
T1439 34-45 NN denotes methylation
T1438 25-33 NN denotes promoter
T1437 20-24 NN denotes gene
T1436 15-19 NN denotes MGMT
T1435 12-14 IN denotes in
T1434 3-11 NN denotes increase
T1433 0-2 DT denotes An
R984 T1434 T1433 arg1Of increase,An
R985 T1434 T1435 arg1Of increase,in
R986 T1434 T1440 arg1Of increase,","
R987 T1434 T1441 arg1Of increase,which
R988 T1434 T1442 arg1Of increase,blocks
R989 T1434 T1447 arg1Of increase,prolongs
R990 T1439 T1435 arg2Of methylation,in
R991 T1439 T1436 arg1Of methylation,MGMT
R992 T1439 T1437 arg1Of methylation,gene
R993 T1439 T1438 arg1Of methylation,promoter
R994 T1445 T1442 arg2Of expression,blocks
R995 T1445 T1443 arg1Of expression,MGMT
R996 T1445 T1444 arg1Of expression,protein
R997 T1447 T1446 arg1Of prolongs,","
R998 T1450 T1447 arg2Of survival,prolongs
R999 T1450 T1448 arg1Of survival,cancer
R1000 T1450 T1449 arg1Of survival,patient

GO-BP

Id Subject Object Predicate Lexical cue
T2007 34-45 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation
T1996 60-64 http://purl.obolibrary.org/obo/GO_0003908 denotes MGMT
T1995 15-19 http://purl.obolibrary.org/obo/GO_0003908 denotes MGMT

GO-MF

Id Subject Object Predicate Lexical cue
T2023 60-64 http://purl.obolibrary.org/obo/GO_0003908 denotes MGMT
T2022 15-19 http://purl.obolibrary.org/obo/GO_0003908 denotes MGMT

sentences

Id Subject Object Predicate Lexical cue
T892 0-118 Sentence denotes An increase in MGMT gene promoter methylation, which blocks MGMT protein expression, prolongs cancer patient survival.
T28 0-118 Sentence denotes An increase in MGMT gene promoter methylation, which blocks MGMT protein expression, prolongs cancer patient survival.

simple1

Id Subject Object Predicate Lexical cue
T2059 60-64 Protein denotes MGMT
T2058 15-19 Protein denotes MGMT