PMC:3585731 / 947-1066 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3585731","sourcedb":"PMC","sourceid":"3585731","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3585731","text":"art through mTORC1, links RIP1 to JNK activation and autocrine production of TNFα. In other cell types, such as mouse l","tracks":[{"project":"testone","denotations":[{"id":"T27","span":{"begin":63,"end":73},"obj":"Gene_expression"},{"id":"T19","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T18","span":{"begin":26,"end":30},"obj":"Protein"}],"relations":[{"id":"R3","pred":"themeOf","subj":"T19","obj":"T27"}],"attributes":[{"subj":"T27","pred":"source","obj":"testone"},{"subj":"T19","pred":"source","obj":"testone"},{"subj":"T18","pred":"source","obj":"testone"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T310","span":{"begin":112,"end":117},"obj":"NN"},{"id":"T309","span":{"begin":109,"end":111},"obj":"IN"},{"id":"T308","span":{"begin":104,"end":108},"obj":"JJ"},{"id":"T307","span":{"begin":102,"end":103},"obj":"-COMMA-"},{"id":"T306","span":{"begin":97,"end":102},"obj":"NN"},{"id":"T305","span":{"begin":92,"end":96},"obj":"NN"},{"id":"T304","span":{"begin":86,"end":91},"obj":"JJ"},{"id":"T303","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T302","span":{"begin":77,"end":81},"obj":"NN"},{"id":"T301","span":{"begin":74,"end":76},"obj":"IN"},{"id":"T300","span":{"begin":63,"end":73},"obj":"NN"},{"id":"T299","span":{"begin":53,"end":62},"obj":"JJ"},{"id":"T298","span":{"begin":49,"end":52},"obj":"CC"},{"id":"T297","span":{"begin":38,"end":48},"obj":"NN"},{"id":"T296","span":{"begin":34,"end":37},"obj":"NN"},{"id":"T295","span":{"begin":31,"end":33},"obj":"TO"},{"id":"T294","span":{"begin":26,"end":30},"obj":"NN"},{"id":"T293","span":{"begin":20,"end":25},"obj":"VB"},{"id":"T292","span":{"begin":18,"end":19},"obj":"-COMMA-"},{"id":"T291","span":{"begin":12,"end":18},"obj":"NN"},{"id":"T290","span":{"begin":4,"end":11},"obj":"IN"}],"relations":[{"id":"R151","pred":"arg2Of","subj":"T291","obj":"T290"},{"id":"R152","pred":"arg1Of","subj":"T293","obj":"T292"},{"id":"R153","pred":"arg2Of","subj":"T294","obj":"T293"},{"id":"R154","pred":"arg1Of","subj":"T294","obj":"T295"},{"id":"R155","pred":"arg1Of","subj":"T297","obj":"T296"},{"id":"R156","pred":"arg1Of","subj":"T297","obj":"T298"},{"id":"R157","pred":"arg2Of","subj":"T298","obj":"T295"},{"id":"R158","pred":"arg2Of","subj":"T300","obj":"T298"},{"id":"R159","pred":"arg1Of","subj":"T300","obj":"T299"},{"id":"R160","pred":"arg1Of","subj":"T300","obj":"T301"},{"id":"R161","pred":"arg2Of","subj":"T302","obj":"T301"},{"id":"R162","pred":"arg2Of","subj":"T306","obj":"T303"},{"id":"R163","pred":"arg1Of","subj":"T306","obj":"T304"},{"id":"R164","pred":"arg1Of","subj":"T306","obj":"T305"},{"id":"R165","pred":"arg1Of","subj":"T306","obj":"T307"},{"id":"R166","pred":"arg1Of","subj":"T306","obj":"T309"},{"id":"R167","pred":"arg1Of","subj":"T309","obj":"T308"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T310","pred":"source","obj":"pmc-enju-pas"},{"subj":"T309","pred":"source","obj":"pmc-enju-pas"},{"subj":"T308","pred":"source","obj":"pmc-enju-pas"},{"subj":"T307","pred":"source","obj":"pmc-enju-pas"},{"subj":"T306","pred":"source","obj":"pmc-enju-pas"},{"subj":"T305","pred":"source","obj":"pmc-enju-pas"},{"subj":"T304","pred":"source","obj":"pmc-enju-pas"},{"subj":"T303","pred":"source","obj":"pmc-enju-pas"},{"subj":"T302","pred":"source","obj":"pmc-enju-pas"},{"subj":"T301","pred":"source","obj":"pmc-enju-pas"},{"subj":"T300","pred":"source","obj":"pmc-enju-pas"},{"subj":"T299","pred":"source","obj":"pmc-enju-pas"},{"subj":"T298","pred":"source","obj":"pmc-enju-pas"},{"subj":"T297","pred":"source","obj":"pmc-enju-pas"},{"subj":"T296","pred":"source","obj":"pmc-enju-pas"},{"subj":"T295","pred":"source","obj":"pmc-enju-pas"},{"subj":"T294","pred":"source","obj":"pmc-enju-pas"},{"subj":"T293","pred":"source","obj":"pmc-enju-pas"},{"subj":"T292","pred":"source","obj":"pmc-enju-pas"},{"subj":"T291","pred":"source","obj":"pmc-enju-pas"},{"subj":"T290","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T95","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T96","span":{"begin":77,"end":81},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T95","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T96","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T409","span":{"begin":26,"end":30},"obj":"http://www.uniprot.org/uniprot/Q13546"},{"id":"T403","span":{"begin":77,"end":81},"obj":"http://www.uniprot.org/uniprot/P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T409","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T403","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T133","span":{"begin":34,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"attributes":[{"subj":"T133","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T136","span":{"begin":34,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"attributes":[{"subj":"T136","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T142","span":{"begin":12,"end":18},"obj":"http://purl.obolibrary.org/obo/GO_0031931"},{"id":"T138","span":{"begin":92,"end":96},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T142","pred":"source","obj":"GO-CC"},{"subj":"T138","pred":"source","obj":"GO-CC"}]},{"project":"simple1","denotations":[{"id":"T150","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T151","span":{"begin":77,"end":81},"obj":"Protein"}],"attributes":[{"subj":"T150","pred":"source","obj":"simple1"},{"subj":"T151","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T360","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T361","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T368","span":{"begin":20,"end":25},"obj":"Positive_regulation"}],"relations":[{"id":"R453","pred":"themeOf","subj":"T360","obj":"T368"}],"attributes":[{"subj":"T360","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T361","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T368","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T448","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T449","span":{"begin":77,"end":81},"obj":"Protein"}],"attributes":[{"subj":"T448","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T449","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T417","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T418","span":{"begin":77,"end":81},"obj":"Protein"}],"attributes":[{"subj":"T417","pred":"source","obj":"DLUT931"},{"subj":"T418","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T763","span":{"begin":12,"end":81},"obj":"Binding"},{"id":"T762","span":{"begin":34,"end":48},"obj":"Positive_regulation"},{"id":"T761","span":{"begin":53,"end":81},"obj":"Gene_expression"},{"id":"T756","span":{"begin":74,"end":81},"obj":"Protein"},{"id":"T752","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T751","span":{"begin":12,"end":18},"obj":"Entity"},{"id":"T740","span":{"begin":34,"end":37},"obj":"Protein"},{"id":"T731","span":{"begin":86,"end":111},"obj":"Entity"}],"relations":[{"id":"R434","pred":"themeOf","subj":"T740","obj":"T762"},{"id":"R437","pred":"themeOf","subj":"T751","obj":"T763"},{"id":"R438","pred":"themeOf","subj":"T752","obj":"T763"},{"id":"R439","pred":"themeOf","subj":"T756","obj":"T761"}],"attributes":[{"subj":"T763","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T762","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T761","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T756","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T752","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T751","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T740","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T731","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T651","span":{"begin":112,"end":117},"obj":"NN"},{"id":"T650","span":{"begin":109,"end":111},"obj":"IN"},{"id":"T649","span":{"begin":104,"end":108},"obj":"JJ"},{"id":"T648","span":{"begin":102,"end":103},"obj":","},{"id":"T647","span":{"begin":97,"end":102},"obj":"NNS"},{"id":"T646","span":{"begin":92,"end":96},"obj":"NN"},{"id":"T645","span":{"begin":86,"end":91},"obj":"JJ"},{"id":"T644","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T643","span":{"begin":81,"end":82},"obj":"."},{"id":"T642","span":{"begin":77,"end":81},"obj":"NNP"},{"id":"T641","span":{"begin":74,"end":76},"obj":"IN"},{"id":"T640","span":{"begin":63,"end":73},"obj":"NN"},{"id":"T639","span":{"begin":53,"end":62},"obj":"NN"},{"id":"T638","span":{"begin":49,"end":52},"obj":"CC"},{"id":"T637","span":{"begin":38,"end":48},"obj":"NN"},{"id":"T636","span":{"begin":34,"end":37},"obj":"NNP"},{"id":"T635","span":{"begin":31,"end":33},"obj":"TO"},{"id":"T634","span":{"begin":26,"end":30},"obj":"VBP"},{"id":"T633","span":{"begin":20,"end":25},"obj":"NNS"},{"id":"T632","span":{"begin":18,"end":19},"obj":","},{"id":"T631","span":{"begin":12,"end":18},"obj":"NNP"},{"id":"T630","span":{"begin":4,"end":11},"obj":"IN"}],"relations":[{"id":"R371","pred":"pobj","subj":"T631","obj":"T630"},{"id":"R372","pred":"punct","subj":"T632","obj":"T634"},{"id":"R373","pred":"nsubj","subj":"T633","obj":"T634"},{"id":"R375","pred":"prep","subj":"T635","obj":"T634"},{"id":"R376","pred":"compound","subj":"T636","obj":"T637"},{"id":"R377","pred":"nmod","subj":"T637","obj":"T640"},{"id":"R378","pred":"cc","subj":"T638","obj":"T637"},{"id":"R379","pred":"conj","subj":"T639","obj":"T637"},{"id":"R380","pred":"pobj","subj":"T640","obj":"T635"},{"id":"R381","pred":"prep","subj":"T641","obj":"T640"},{"id":"R382","pred":"pobj","subj":"T642","obj":"T641"},{"id":"R383","pred":"punct","subj":"T643","obj":"T634"},{"id":"R385","pred":"amod","subj":"T645","obj":"T647"},{"id":"R386","pred":"compound","subj":"T646","obj":"T647"},{"id":"R387","pred":"pobj","subj":"T647","obj":"T644"},{"id":"R388","pred":"punct","subj":"T648","obj":"T647"},{"id":"R389","pred":"amod","subj":"T649","obj":"T650"},{"id":"R390","pred":"prep","subj":"T650","obj":"T647"}],"attributes":[{"subj":"T651","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T650","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T649","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T648","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T647","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T646","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T645","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T644","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T643","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T642","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T641","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T640","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T639","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T638","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T637","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T636","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T635","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T634","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T633","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T632","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T631","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T630","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T481","span":{"begin":38,"end":48},"obj":"Positive_regulation"},{"id":"T480","span":{"begin":38,"end":48},"obj":"Positive_regulation"},{"id":"T479","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T478","span":{"begin":34,"end":37},"obj":"Protein"},{"id":"T477","span":{"begin":26,"end":30},"obj":"Protein"}],"relations":[{"id":"R222","pred":"themeOf","subj":"T478","obj":"T480"},{"id":"R223","pred":"themeOf","subj":"T479","obj":"T481"}],"attributes":[{"subj":"T481","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T480","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T479","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T478","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T477","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"test3","denotations":[{"id":"T55","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T54","span":{"begin":63,"end":73},"obj":"Gene_expression"},{"id":"T53","span":{"begin":26,"end":30},"obj":"Protein"},{"id":"T37","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T36","span":{"begin":26,"end":30},"obj":"Protein"}],"relations":[{"id":"R13","pred":"themeOf","subj":"T55","obj":"T54"}],"attributes":[{"subj":"T55","pred":"source","obj":"test3"},{"subj":"T54","pred":"source","obj":"test3"},{"subj":"T53","pred":"source","obj":"test3"},{"subj":"T37","pred":"source","obj":"test3"},{"subj":"T36","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"testone","color":"#93cfec","default":true},{"id":"pmc-enju-pas","color":"#e9ec93"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#d593ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93ecbb"},{"id":"GO-BP","color":"#eca193"},{"id":"GO-MF","color":"#939eec"},{"id":"GO-CC","color":"#b8ec93"},{"id":"simple1","color":"#ec93d2"},{"id":"BioNLP16_DUT","color":"#93eceb"},{"id":"BioNLP16_Messiy","color":"#ecd193"},{"id":"DLUT931","color":"#b793ec"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#93ec9d"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ec93a2"},{"id":"bionlp-st-ge-2016-test-tees","color":"#93bcec"},{"id":"test3","color":"#d6ec93"}]}]}}