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PMC:3585731 / 947-1066 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T27 63-73 Gene_expression denotes production
T19 77-81 Protein denotes TNFα
T18 26-30 Protein denotes RIP1
R3 T19 T27 themeOf TNFα,production

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T310 112-117 NN denotes mouse
T309 109-111 IN denotes as
T308 104-108 JJ denotes such
T307 102-103 -COMMA- denotes ,
T306 97-102 NN denotes types
T305 92-96 NN denotes cell
T304 86-91 JJ denotes other
T303 83-85 IN denotes In
T302 77-81 NN denotes TNFα
T301 74-76 IN denotes of
T300 63-73 NN denotes production
T299 53-62 JJ denotes autocrine
T298 49-52 CC denotes and
T297 38-48 NN denotes activation
T296 34-37 NN denotes JNK
T295 31-33 TO denotes to
T294 26-30 NN denotes RIP1
T293 20-25 VB denotes links
T292 18-19 -COMMA- denotes ,
T291 12-18 NN denotes mTORC1
T290 4-11 IN denotes through
R151 T291 T290 arg2Of mTORC1,through
R152 T293 T292 arg1Of links,","
R153 T294 T293 arg2Of RIP1,links
R154 T294 T295 arg1Of RIP1,to
R155 T297 T296 arg1Of activation,JNK
R156 T297 T298 arg1Of activation,and
R157 T298 T295 arg2Of and,to
R158 T300 T298 arg2Of production,and
R159 T300 T299 arg1Of production,autocrine
R160 T300 T301 arg1Of production,of
R161 T302 T301 arg2Of TNFα,of
R162 T306 T303 arg2Of types,In
R163 T306 T304 arg1Of types,other
R164 T306 T305 arg1Of types,cell
R165 T306 T307 arg1Of types,","
R166 T306 T309 arg1Of types,as
R167 T309 T308 arg1Of as,such

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T95 26-30 Protein denotes RIP1
T96 77-81 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T409 26-30 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T403 77-81 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-BP

Id Subject Object Predicate Lexical cue
T133 34-37 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-MF

Id Subject Object Predicate Lexical cue
T136 34-37 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-CC

Id Subject Object Predicate Lexical cue
T142 12-18 http://purl.obolibrary.org/obo/GO_0031931 denotes mTORC1
T138 92-96 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

simple1

Id Subject Object Predicate Lexical cue
T150 26-30 Protein denotes RIP1
T151 77-81 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T360 26-30 Protein denotes RIP1
T361 77-81 Protein denotes TNFα
T368 20-25 Positive_regulation denotes links
R453 T360 T368 themeOf RIP1,links

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T448 26-30 Protein denotes RIP1
T449 77-81 Protein denotes TNFα

DLUT931

Id Subject Object Predicate Lexical cue
T417 26-30 Protein denotes RIP1
T418 77-81 Protein denotes TNFα

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T763 12-81 Binding denotes mTORC1, links RIP1 to JNK activation and autocrine production of TNFα
T762 34-48 Positive_regulation denotes JNK activation
T761 53-81 Gene_expression denotes autocrine production of TNFα
T756 74-81 Protein denotes of TNFα
T752 26-30 Protein denotes RIP1
T751 12-18 Entity denotes mTORC1
T740 34-37 Protein denotes JNK
T731 86-111 Entity denotes other cell types, such as
R434 T740 T762 themeOf JNK,JNK activation
R437 T751 T763 themeOf mTORC1,"mTORC1, links RIP1 to JNK activation and autocrine production of TNFα"
R438 T752 T763 themeOf RIP1,"mTORC1, links RIP1 to JNK activation and autocrine production of TNFα"
R439 T756 T761 themeOf of TNFα,autocrine production of TNFα

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T651 112-117 NN denotes mouse
T650 109-111 IN denotes as
T649 104-108 JJ denotes such
T648 102-103 , denotes ,
T647 97-102 NNS denotes types
T646 92-96 NN denotes cell
T645 86-91 JJ denotes other
T644 83-85 IN denotes In
T643 81-82 . denotes .
T642 77-81 NNP denotes TNFα
T641 74-76 IN denotes of
T640 63-73 NN denotes production
T639 53-62 NN denotes autocrine
T638 49-52 CC denotes and
T637 38-48 NN denotes activation
T636 34-37 NNP denotes JNK
T635 31-33 TO denotes to
T634 26-30 VBP denotes RIP1
T633 20-25 NNS denotes links
T632 18-19 , denotes ,
T631 12-18 NNP denotes mTORC1
T630 4-11 IN denotes through
R371 T631 T630 pobj mTORC1,through
R372 T632 T634 punct ",",RIP1
R373 T633 T634 nsubj links,RIP1
R375 T635 T634 prep to,RIP1
R376 T636 T637 compound JNK,activation
R377 T637 T640 nmod activation,production
R378 T638 T637 cc and,activation
R379 T639 T637 conj autocrine,activation
R380 T640 T635 pobj production,to
R381 T641 T640 prep of,production
R382 T642 T641 pobj TNFα,of
R383 T643 T634 punct .,RIP1
R385 T645 T647 amod other,types
R386 T646 T647 compound cell,types
R387 T647 T644 pobj types,In
R388 T648 T647 punct ",",types
R389 T649 T650 amod such,as
R390 T650 T647 prep as,types

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T481 38-48 Positive_regulation denotes activation
T480 38-48 Positive_regulation denotes activation
T479 77-81 Protein denotes TNFα
T478 34-37 Protein denotes JNK
T477 26-30 Protein denotes RIP1
R222 T478 T480 themeOf JNK,activation
R223 T479 T481 themeOf TNFα,activation

test3

Id Subject Object Predicate Lexical cue
T55 77-81 Protein denotes TNFα
T54 63-73 Gene_expression denotes production
T53 26-30 Protein denotes RIP1
T37 77-81 Protein denotes TNFα
T36 26-30 Protein denotes RIP1
R13 T55 T54 themeOf TNFα,production