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PMC:3585731 / 639-857 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T26 43-58 Phosphorylation denotes phosphorylation
T25 13-22 Regulation denotes dependent
T17 168-172 Protein denotes RIP1
T16 8-12 Protein denotes RIP1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T272 207-217 JJ denotes downstream
T271 199-206 IN denotes through
T270 187-198 NN denotes necroptosis
T269 178-186 VB denotes controls
T268 174-177 NN denotes Akt
T267 168-172 NN denotes RIP1
T266 164-167 CC denotes and
T265 156-163 NN denotes factors
T264 149-155 NN denotes growth
T263 144-148 DT denotes both
T262 139-143 IN denotes from
T261 132-138 NN denotes inputs
T260 122-131 NN denotes signaling
T259 110-121 JJ denotes independent
T258 101-109 VB denotes requires
T257 90-100 NN denotes activation
T256 85-89 DT denotes this
T255 83-84 -COMMA- denotes ,
T254 78-83 NN denotes cells
T253 73-77 NN denotes L929
T252 70-72 IN denotes In
T251 62-68 NN denotes Thr308
T250 59-61 IN denotes on
T249 43-58 NN denotes phosphorylation
T248 39-42 PRP-DOLLAR- denotes its
T247 31-38 IN denotes through
T246 23-30 NN denotes fashion
T245 13-22 JJ denotes dependent
T244 8-12 NN denotes RIP1
T243 6-7 DT denotes a
T242 3-5 IN denotes in
R106 T245 T244 arg1Of dependent,RIP1
R107 T246 T242 arg2Of fashion,in
R108 T246 T243 arg1Of fashion,a
R109 T246 T245 arg1Of fashion,dependent
R110 T249 T247 arg2Of phosphorylation,through
R111 T249 T248 arg1Of phosphorylation,its
R112 T249 T250 arg1Of phosphorylation,on
R113 T251 T250 arg2Of Thr308,on
R114 T254 T252 arg2Of cells,In
R115 T254 T253 arg1Of cells,L929
R116 T257 T256 arg1Of activation,this
R117 T257 T258 arg1Of activation,requires
R118 T258 T252 arg1Of requires,In
R119 T258 T255 arg1Of requires,","
R120 T261 T258 arg2Of inputs,requires
R121 T261 T259 arg1Of inputs,independent
R122 T261 T260 arg1Of inputs,signaling
R123 T261 T262 arg1Of inputs,from
R124 T265 T264 arg1Of factors,growth
R125 T265 T266 arg1Of factors,and
R126 T266 T262 arg2Of and,from
R127 T266 T263 arg1Of and,both
R128 T267 T266 arg2Of RIP1,and
R129 T268 T269 arg1Of Akt,controls
R130 T269 T271 arg1Of controls,through
R131 T270 T269 arg2Of necroptosis,controls

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T94 168-172 Protein denotes RIP1
T93 8-12 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T408 168-172 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T407 8-12 http://www.uniprot.org/uniprot/Q13546 denotes RIP1
T397 174-177 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T390 174-177 http://www.uniprot.org/uniprot/P31751 denotes Akt
T383 174-177 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T132 149-155 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T131 78-100 http://purl.obolibrary.org/obo/GO_0001775 denotes cells, this activation
T130 43-58 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T128 122-131 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T112 187-198 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T104 187-198 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis

sentences

Id Subject Object Predicate Lexical cue
T65 70-173 Sentence denotes In L929 cells, this activation requires independent signaling inputs from both growth factors and RIP1.
T8 70-173 Sentence denotes In L929 cells, this activation requires independent signaling inputs from both growth factors and RIP1.

simple1

Id Subject Object Predicate Lexical cue
T148 8-12 Protein denotes RIP1
T149 168-172 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T358 8-12 Protein denotes RIP1
T359 168-172 Protein denotes RIP1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T446 8-12 Protein denotes RIP1
T447 168-172 Protein denotes RIP1

DLUT931

Id Subject Object Predicate Lexical cue
T425 101-109 Positive_regulation denotes requires
T415 8-12 Protein denotes RIP1
T416 168-172 Protein denotes RIP1
R460 T416 T425 themeOf RIP1,requires

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T760 70-172 Regulation denotes In L929 cells, this activation requires independent signaling inputs from both growth factors and RIP1
T745 8-22 Protein denotes RIP1 dependent
T737 59-68 Entity denotes on Thr308
T733 174-177 Protein denotes Akt
T732 168-172 Protein denotes RIP1

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T611 207-217 JJ denotes downstream
T610 199-206 IN denotes through
T609 187-198 NN denotes necroptosis
T608 178-186 VBZ denotes controls
T607 174-177 NNP denotes Akt
T606 172-173 . denotes .
T605 168-172 NNP denotes RIP1
T604 164-167 CC denotes and
T603 156-163 NNS denotes factors
T602 149-155 NN denotes growth
T601 144-148 DT denotes both
T600 139-143 IN denotes from
T599 132-138 NNS denotes inputs
T598 122-131 VBG denotes signaling
T597 110-121 JJ denotes independent
T596 101-109 VBZ denotes requires
T595 90-100 NN denotes activation
T594 85-89 DT denotes this
T593 83-84 , denotes ,
T592 78-83 NNS denotes cells
T591 73-77 CD denotes L929
T590 70-72 IN denotes In
T589 68-69 . denotes .
T588 62-68 NNP denotes Thr308
T587 59-61 IN denotes on
T586 43-58 NN denotes phosphorylation
T585 39-42 PRP$ denotes its
T584 31-38 IN denotes through
T583 23-30 NN denotes fashion
T582 13-22 JJ denotes dependent
T581 8-12 NNP denotes RIP1
T580 6-7 DT denotes a
T579 3-5 IN denotes in
R320 T580 T583 det a,fashion
R321 T581 T583 nmod RIP1,fashion
R322 T582 T583 amod dependent,fashion
R323 T583 T579 pobj fashion,in
R325 T585 T586 poss its,phosphorylation
R326 T586 T584 pobj phosphorylation,through
R327 T587 T586 prep on,phosphorylation
R328 T588 T587 pobj Thr308,on
R330 T590 T596 prep In,requires
R331 T591 T592 nummod L929,cells
R332 T592 T590 pobj cells,In
R333 T593 T596 punct ",",requires
R334 T594 T595 det this,activation
R335 T595 T596 nsubj activation,requires
R336 T596 T596 ROOT requires,requires
R337 T597 T599 amod independent,inputs
R338 T598 T599 amod signaling,inputs
R339 T599 T596 dobj inputs,requires
R340 T600 T599 prep from,inputs
R341 T601 T603 det both,factors
R342 T602 T603 compound growth,factors
R343 T603 T600 pobj factors,from
R344 T604 T603 cc and,factors
R345 T605 T603 conj RIP1,factors
R346 T606 T596 punct .,requires
R347 T607 T608 nsubj Akt,controls
R348 T608 T608 ROOT controls,controls
R349 T609 T608 dobj necroptosis,controls
R350 T610 T608 prep through,controls

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T475 168-172 Protein denotes RIP1
T473 43-58 Phosphorylation denotes phosphorylation
T471 62-68 Protein denotes Thr308
T470 8-12 Protein denotes RIP1
R220 T471 T473 themeOf Thr308,phosphorylation

test3

Id Subject Object Predicate Lexical cue
T52 168-172 Protein denotes RIP1
T51 43-58 Phosphorylation denotes phosphorylation
T50 8-12 Protein denotes RIP1
T35 168-172 Protein denotes RIP1
T34 8-12 Protein denotes RIP1