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PMC:3585731 / 50116-50716 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T25119 4-13 Negative_regulation denotes inhibitor

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T25256 0-3 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T25255 0-3 http://www.uniprot.org/uniprot/P31751 denotes Akt
T25254 0-3 http://www.uniprot.org/uniprot/P31749 denotes Akt

GO-BP

Id Subject Object Predicate Lexical cue
T25142 150-153 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-MF

Id Subject Object Predicate Lexical cue
T25143 150-153 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

GO-CC

Id Subject Object Predicate Lexical cue
T25146 496-500 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell

sentences

Id Subject Object Predicate Lexical cue
T25132 0-600 Sentence denotes Akt inhibitor VIII (10 µM, Calbiochem), MK-2206 (10 µM, Selleck Chem), Triciribine (100 µM, National Cancer Institute), SP600125 (10 µM, Calbiochem), JNK inhibitor VIII (10 µM, Calbiochem), UO126 (10 mM, Cayman Chem), PD169316 (10 µM, Calbiochem), LiCl (10 mM, Sigma), SB216763 (10 µM, Calbiochem), BX912 (10 µM, Axon Med Chem), PF-4706871 (Sigma), rapamycin (100 nM, Santa Cruz), PI-103 (10 µM, Calbiochem), Torin-1 (500 nM, gift of Dr. Nathanael Grey (Harvard Medical School), LY249002 (10 µM, Cell Signaling), PD173074 (2 µM, Cayman Chem), PD166866 (20 µM, Calbiochem), 4EGI-1 (50 µM, Calbiochem).
T312 0-600 Sentence denotes Akt inhibitor VIII (10 µM, Calbiochem), MK-2206 (10 µM, Selleck Chem), Triciribine (100 µM, National Cancer Institute), SP600125 (10 µM, Calbiochem), JNK inhibitor VIII (10 µM, Calbiochem), UO126 (10 mM, Cayman Chem), PD169316 (10 µM, Calbiochem), LiCl (10 mM, Sigma), SB216763 (10 µM, Calbiochem), BX912 (10 µM, Axon Med Chem), PF-4706871 (Sigma), rapamycin (100 nM, Santa Cruz), PI-103 (10 µM, Calbiochem), Torin-1 (500 nM, gift of Dr. Nathanael Grey (Harvard Medical School), LY249002 (10 µM, Cell Signaling), PD173074 (2 µM, Cayman Chem), PD166866 (20 µM, Calbiochem), 4EGI-1 (50 µM, Calbiochem).

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T25462 599-600 . denotes .
T25461 598-599 -RRB- denotes )
T25460 588-598 NNP denotes Calbiochem
T25459 586-587 , denotes ,
T25458 584-586 NNP denotes µM
T25457 581-583 CD denotes 50
T25456 580-581 -LRB- denotes (
T25455 573-579 NNP denotes 4EGI-1
T25454 571-572 , denotes ,
T25453 570-571 -RRB- denotes )
T25452 560-570 NNP denotes Calbiochem
T25451 558-559 , denotes ,
T25450 556-558 NNP denotes µM
T25449 553-555 CD denotes 20
T25448 552-553 -LRB- denotes (
T25447 543-551 NNP denotes PD166866
T25446 541-542 , denotes ,
T25445 540-541 -RRB- denotes )
T25444 536-540 NNP denotes Chem
T25443 529-535 NNP denotes Cayman
T25442 527-528 , denotes ,
T25441 525-527 NNP denotes µM
T25440 523-524 CD denotes 2
T25439 522-523 -LRB- denotes (
T25438 513-521 NNP denotes PD173074
T25437 511-512 , denotes ,
T25436 510-511 -RRB- denotes )
T25435 501-510 NNP denotes Signaling
T25434 496-500 NNP denotes Cell
T25433 494-495 , denotes ,
T25432 492-494 NNP denotes µM
T25431 489-491 CD denotes 10
T25430 488-489 -LRB- denotes (
T25429 479-487 NNP denotes LY249002
T25428 477-478 , denotes ,
T25427 476-477 -RRB- denotes )
T25426 470-476 NNP denotes School
T25425 462-469 NNP denotes Medical
T25424 454-461 NNP denotes Harvard
T25423 453-454 -LRB- denotes (
T25422 448-452 NNP denotes Grey
T25421 438-447 NNP denotes Nathanael
T25420 434-437 NNP denotes Dr.
T25419 431-433 IN denotes of
T25418 426-430 NN denotes gift
T25417 424-425 , denotes ,
T25416 422-424 NNP denotes nM
T25415 418-421 CD denotes 500
T25414 417-418 -LRB- denotes (
T25413 409-416 NNP denotes Torin-1
T25412 407-408 , denotes ,
T25411 406-407 -RRB- denotes )
T25410 396-406 NNP denotes Calbiochem
T25409 394-395 , denotes ,
T25408 392-394 NNP denotes µM
T25407 389-391 CD denotes 10
T25406 388-389 -LRB- denotes (
T25405 381-387 NN denotes PI-103
T25404 379-380 , denotes ,
T25403 378-379 -RRB- denotes )
T25402 374-378 NNP denotes Cruz
T25401 368-373 NNP denotes Santa
T25400 366-367 , denotes ,
T25399 364-366 NNP denotes nM
T25398 360-363 CD denotes 100
T25397 359-360 -LRB- denotes (
T25396 349-358 NN denotes rapamycin
T25395 347-348 , denotes ,
T25394 346-347 -RRB- denotes )
T25393 341-346 NNP denotes Sigma
T25392 340-341 -LRB- denotes (
T25391 329-339 NNP denotes PF-4706871
T25390 327-328 , denotes ,
T25389 326-327 -RRB- denotes )
T25388 322-326 NNP denotes Chem
T25387 318-321 NNP denotes Med
T25386 313-317 NNP denotes Axon
T25385 311-312 , denotes ,
T25384 309-311 NNP denotes µM
T25383 306-308 CD denotes 10
T25382 305-306 -LRB- denotes (
T25381 299-304 NNP denotes BX912
T25380 297-298 , denotes ,
T25379 296-297 -RRB- denotes )
T25378 286-296 NNP denotes Calbiochem
T25377 284-285 , denotes ,
T25376 282-284 NNP denotes µM
T25375 279-281 CD denotes 10
T25374 278-279 -LRB- denotes (
T25373 269-277 NNP denotes SB216763
T25372 267-268 , denotes ,
T25371 266-267 -RRB- denotes )
T25370 261-266 NNP denotes Sigma
T25369 259-260 , denotes ,
T25368 257-259 NNP denotes mM
T25367 254-256 CD denotes 10
T25366 253-254 -LRB- denotes (
T25365 248-252 NNP denotes LiCl
T25364 246-247 , denotes ,
T25363 245-246 -RRB- denotes )
T25362 235-245 NNP denotes Calbiochem
T25361 233-234 , denotes ,
T25360 231-233 NNP denotes µM
T25359 228-230 CD denotes 10
T25337 148-149 , denotes ,
T25336 147-148 -RRB- denotes )
T25335 137-147 NNP denotes Calbiochem
T25334 135-136 , denotes ,
T25333 133-135 NNP denotes µM
T25332 130-132 CD denotes 10
T25331 129-130 -LRB- denotes (
T25330 120-128 NNP denotes SP600125
T25329 118-119 , denotes ,
T25328 117-118 -RRB- denotes )
T25327 108-117 NNP denotes Institute
T25326 101-107 NNP denotes Cancer
T25325 92-100 NNP denotes National
T25324 90-91 , denotes ,
T25323 88-90 NNP denotes µM
T25322 84-87 CD denotes 100
T25321 83-84 -LRB- denotes (
T25320 71-82 NNP denotes Triciribine
T25319 69-70 , denotes ,
T25318 68-69 -RRB- denotes )
T25317 64-68 NNP denotes Chem
T25316 56-63 NNP denotes Selleck
T25315 54-55 , denotes ,
T25314 52-54 NNP denotes µM
T25313 49-51 CD denotes 10
T25312 48-49 -LRB- denotes (
T25311 40-47 NNP denotes MK-2206
T25310 38-39 , denotes ,
T25309 37-38 -RRB- denotes )
T25308 27-37 NNP denotes Calbiochem
T25344 175-176 , denotes ,
T25343 173-175 NNP denotes µM
T25342 170-172 CD denotes 10
T25341 169-170 -LRB- denotes (
T25340 164-168 NNP denotes VIII
T25339 154-163 NN denotes inhibitor
T25338 150-153 NNP denotes JNK
T25307 25-26 , denotes ,
T25306 23-25 NNP denotes µM
T25305 20-22 CD denotes 10
T25304 19-20 -LRB- denotes (
T25303 14-18 NNP denotes VIII
T25302 4-13 NN denotes inhibitor
T25301 0-3 JJ denotes Akt
T25358 227-228 -LRB- denotes (
T25357 218-226 NNP denotes PD169316
T25356 216-217 , denotes ,
T25355 215-216 -RRB- denotes )
T25354 211-215 NNP denotes Chem
T25353 204-210 NNP denotes Cayman
T25352 202-203 , denotes ,
T25351 200-202 NNP denotes mM
T25350 197-199 CD denotes 10
T25349 196-197 -LRB- denotes (
T25348 190-195 NNP denotes UO126
T25347 188-189 , denotes ,
T25346 187-188 -RRB- denotes )
T25345 177-187 NNP denotes Calbiochem
R17235 T25301 T25303 amod Akt,VIII
R17236 T25302 T25303 compound inhibitor,VIII
R17238 T25304 T25303 punct (,VIII
R17239 T25305 T25306 nummod 10,µM
R17240 T25306 T25303 appos µM,VIII
R17241 T25307 T25306 punct ",",µM
R17242 T25308 T25306 appos Calbiochem,µM
R17243 T25309 T25306 punct ),µM
R17244 T25310 T25303 punct ",",VIII
R17245 T25311 T25314 nmod MK-2206,µM
R17246 T25312 T25314 punct (,µM
R17247 T25313 T25314 nummod 10,µM
R17248 T25314 T25303 appos µM,VIII
R17249 T25315 T25314 punct ",",µM
R17250 T25316 T25317 compound Selleck,Chem
R17251 T25317 T25314 appos Chem,µM
R17252 T25318 T25314 punct ),µM
R17253 T25319 T25314 punct ",",µM
R17254 T25320 T25314 conj Triciribine,µM
R17255 T25321 T25323 punct (,µM
R17256 T25322 T25323 nummod 100,µM
R17257 T25323 T25314 conj µM,µM
R17258 T25324 T25323 punct ",",µM
R17259 T25325 T25327 compound National,Institute
R17260 T25326 T25327 compound Cancer,Institute
R17261 T25327 T25323 appos Institute,µM
R17262 T25328 T25323 punct ),µM
R17263 T25329 T25323 punct ",",µM
R17264 T25330 T25323 conj SP600125,µM
R17265 T25331 T25333 punct (,µM
R17266 T25332 T25333 nummod 10,µM
R17267 T25333 T25323 conj µM,µM
R17268 T25334 T25333 punct ",",µM
R17269 T25335 T25333 conj Calbiochem,µM
R17270 T25336 T25335 punct ),Calbiochem
R17271 T25337 T25333 punct ",",µM
R17272 T25338 T25340 compound JNK,VIII
R17273 T25339 T25340 compound inhibitor,VIII
R17274 T25340 T25333 npadvmod VIII,µM
R17275 T25341 T25340 punct (,VIII
R17276 T25342 T25343 nummod 10,µM
R17277 T25343 T25340 appos µM,VIII
R17278 T25344 T25340 punct ",",VIII
R17279 T25345 T25340 appos Calbiochem,VIII
R17280 T25346 T25340 punct ),VIII
R17281 T25347 T25340 punct ",",VIII
R17282 T25348 T25340 appos UO126,VIII
R17283 T25349 T25351 punct (,mM
R17284 T25350 T25351 nummod 10,mM
R17285 T25351 T25340 appos mM,VIII
R17286 T25352 T25351 punct ",",mM
R17287 T25353 T25354 compound Cayman,Chem
R17288 T25354 T25351 npadvmod Chem,mM
R17289 T25355 T25351 punct ),mM
R17290 T25356 T25340 punct ",",VIII
R17291 T25357 T25340 appos PD169316,VIII
R17292 T25358 T25360 punct (,µM
R17293 T25359 T25360 nummod 10,µM
R17294 T25360 T25340 appos µM,VIII
R17295 T25361 T25360 punct ",",µM
R17296 T25362 T25360 appos Calbiochem,µM
R17297 T25363 T25360 punct ),µM
R17298 T25364 T25360 punct ",",µM
R17299 T25365 T25360 conj LiCl,µM
R17300 T25366 T25368 punct (,mM
R17301 T25367 T25368 nummod 10,mM
R17302 T25368 T25340 appos mM,VIII
R17303 T25369 T25368 punct ",",mM
R17304 T25370 T25368 npadvmod Sigma,mM
R17305 T25371 T25368 punct ),mM
R17306 T25372 T25340 punct ",",VIII
R17307 T25373 T25340 appos SB216763,VIII
R17308 T25374 T25376 punct (,µM
R17309 T25375 T25376 nummod 10,µM
R17310 T25376 T25340 appos µM,VIII
R17311 T25377 T25376 punct ",",µM
R17312 T25378 T25376 appos Calbiochem,µM
R17313 T25379 T25376 punct ),µM
R17314 T25380 T25376 punct ",",µM
R17315 T25381 T25376 conj BX912,µM
R17316 T25382 T25384 punct (,µM
R17317 T25383 T25384 nummod 10,µM
R17318 T25384 T25388 npadvmod µM,Chem
R17319 T25385 T25384 punct ",",µM
R17320 T25386 T25388 compound Axon,Chem
R17321 T25387 T25388 compound Med,Chem
R17322 T25388 T25340 appos Chem,VIII
R17323 T25389 T25340 punct ),VIII
R17324 T25390 T25340 punct ",",VIII
R17325 T25391 T25340 appos PF-4706871,VIII
R17326 T25392 T25393 punct (,Sigma
R17327 T25393 T25391 parataxis Sigma,PF-4706871
R17328 T25394 T25393 punct ),Sigma
R17329 T25395 T25340 punct ",",VIII
R17330 T25396 T25399 nmod rapamycin,nM
R17331 T25397 T25399 punct (,nM
R17332 T25398 T25399 nummod 100,nM
R17333 T25399 T25340 appos nM,VIII
R17334 T25400 T25399 punct ",",nM
R17335 T25401 T25402 compound Santa,Cruz
R17336 T25402 T25399 appos Cruz,nM
R17337 T25403 T25399 punct ),nM
R17338 T25404 T25399 punct ",",nM
R17339 T25405 T25408 nmod PI-103,µM
R17340 T25406 T25408 punct (,µM
R17341 T25407 T25408 nummod 10,µM
R17342 T25408 T25399 conj µM,nM
R17343 T25409 T25408 punct ",",µM
R17344 T25410 T25408 conj Calbiochem,µM
R17345 T25411 T25410 punct ),Calbiochem
R17346 T25412 T25408 punct ",",µM
R17347 T25413 T25408 conj Torin-1,µM
R17348 T25414 T25416 punct (,nM
R17349 T25415 T25416 nummod 500,nM
R17350 T25416 T25408 conj nM,µM
R17351 T25417 T25416 punct ",",nM
R17352 T25418 T25340 appos gift,VIII
R17353 T25419 T25418 prep of,gift
R17354 T25420 T25422 compound Dr.,Grey
R17355 T25421 T25422 compound Nathanael,Grey
R17356 T25422 T25419 pobj Grey,of
R17357 T25423 T25426 punct (,School
R17358 T25424 T25426 compound Harvard,School
R17359 T25425 T25426 compound Medical,School
R17360 T25426 T25422 appos School,Grey
R17361 T25427 T25426 punct ),School
R17362 T25428 T25422 punct ",",Grey
R17363 T25429 T25432 nmod LY249002,µM
R17364 T25430 T25432 punct (,µM
R17365 T25431 T25432 nummod 10,µM
R17366 T25432 T25422 appos µM,Grey
R17367 T25433 T25432 punct ",",µM
R17368 T25434 T25435 compound Cell,Signaling
R17369 T25435 T25432 conj Signaling,µM
R17370 T25436 T25432 punct ),µM
R17371 T25437 T25432 punct ",",µM
R17372 T25438 T25432 conj PD173074,µM
R17373 T25439 T25441 punct (,µM
R17374 T25440 T25441 nummod 2,µM
R17375 T25441 T25432 conj µM,µM
R17376 T25442 T25441 punct ",",µM
R17377 T25443 T25444 compound Cayman,Chem
R17378 T25444 T25441 npadvmod Chem,µM
R17379 T25445 T25441 punct ),µM
R17380 T25446 T25441 punct ",",µM
R17381 T25447 T25441 conj PD166866,µM
R17382 T25448 T25450 punct (,µM
R17383 T25449 T25450 nummod 20,µM
R17384 T25450 T25441 conj µM,µM
R17385 T25451 T25450 punct ",",µM
R17386 T25452 T25450 conj Calbiochem,µM
R17387 T25453 T25452 punct ),Calbiochem
R17388 T25454 T25450 punct ",",µM
R17389 T25455 T25450 conj 4EGI-1,µM
R17390 T25456 T25458 punct (,µM
R17391 T25457 T25458 nummod 50,µM
R17392 T25458 T25450 conj µM,µM
R17393 T25459 T25458 punct ",",µM
R17394 T25460 T25458 conj Calbiochem,µM
R17395 T25461 T25458 punct ),µM
R17396 T25462 T25303 punct .,VIII

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T25536 4-13 Negative_regulation denotes inhibitor
T25535 154-163 Negative_regulation denotes inhibitor
T25534 4-13 Negative_regulation denotes inhibitor
T25533 150-153 Protein denotes JNK
T25532 0-3 Protein denotes Akt
R17458 T25532 T25534 themeOf Akt,inhibitor
R17459 T25533 T25535 themeOf JNK,inhibitor
R17460 T25535 T25536 themeOf inhibitor,inhibitor

test3

Id Subject Object Predicate Lexical cue
T25124 4-13 Negative_regulation denotes inhibitor