PMC:3585731 / 4297-4550
Annnotations
testone
{"project":"testone","denotations":[{"id":"T818","span":{"begin":235,"end":244},"obj":"Positive_regulation"},{"id":"T807","span":{"begin":175,"end":179},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1634","span":{"begin":245,"end":252},"obj":"IN"},{"id":"T1633","span":{"begin":235,"end":244},"obj":"VB"},{"id":"T1632","span":{"begin":232,"end":234},"obj":"VB"},{"id":"T1631","span":{"begin":228,"end":231},"obj":"NN"},{"id":"T1630","span":{"begin":223,"end":227},"obj":"IN"},{"id":"T1629","span":{"begin":216,"end":222},"obj":"VB"},{"id":"T1628","span":{"begin":211,"end":215},"obj":"NN"},{"id":"T1627","span":{"begin":207,"end":210},"obj":"PRP-DOLLAR-"},{"id":"T1626","span":{"begin":194,"end":205},"obj":"NN"},{"id":"T1625","span":{"begin":187,"end":193},"obj":"IN"},{"id":"T1624","span":{"begin":180,"end":186},"obj":"NN"},{"id":"T1623","span":{"begin":175,"end":179},"obj":"NN"},{"id":"T1622","span":{"begin":170,"end":174},"obj":"IN"},{"id":"T1621","span":{"begin":159,"end":169},"obj":"RB"},{"id":"T1620","span":{"begin":150,"end":158},"obj":"NN"},{"id":"T1619","span":{"begin":146,"end":149},"obj":"NN"},{"id":"T1618","span":{"begin":142,"end":145},"obj":"CC"},{"id":"T1617","span":{"begin":138,"end":141},"obj":"NN"},{"id":"T1616","span":{"begin":134,"end":137},"obj":"DT"},{"id":"T1615","span":{"begin":131,"end":133},"obj":"IN"},{"id":"T1614","span":{"begin":122,"end":130},"obj":"NN"},{"id":"T1613","span":{"begin":112,"end":121},"obj":"JJ"},{"id":"T1612","span":{"begin":108,"end":111},"obj":"CC"},{"id":"T1611","span":{"begin":94,"end":107},"obj":"NN"},{"id":"T1610","span":{"begin":85,"end":93},"obj":"JJ"},{"id":"T1609","span":{"begin":81,"end":84},"obj":"DT"},{"id":"T1608","span":{"begin":71,"end":80},"obj":"VB"},{"id":"T1607","span":{"begin":68,"end":70},"obj":"TO"},{"id":"T1606","span":{"begin":55,"end":67},"obj":"NN"},{"id":"T1605","span":{"begin":49,"end":54},"obj":"DT"},{"id":"T1604","span":{"begin":40,"end":48},"obj":"VB"},{"id":"T1603","span":{"begin":37,"end":39},"obj":"PRP"},{"id":"T1602","span":{"begin":35,"end":36},"obj":"-COMMA-"},{"id":"T1601","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T1600","span":{"begin":25,"end":29},"obj":"DT"},{"id":"T1599","span":{"begin":22,"end":24},"obj":"IN"},{"id":"T1598","span":{"begin":12,"end":20},"obj":"VB"},{"id":"T1597","span":{"begin":7,"end":11},"obj":"VB"},{"id":"T1596","span":{"begin":3,"end":6},"obj":"RB"}],"relations":[{"id":"R1046","pred":"arg1Of","subj":"T1598","obj":"T1596"},{"id":"R1047","pred":"arg2Of","subj":"T1598","obj":"T1597"},{"id":"R1048","pred":"arg2Of","subj":"T1601","obj":"T1599"},{"id":"R1049","pred":"arg1Of","subj":"T1601","obj":"T1600"},{"id":"R1050","pred":"arg1Of","subj":"T1603","obj":"T1604"},{"id":"R1051","pred":"arg1Of","subj":"T1604","obj":"T1599"},{"id":"R1052","pred":"arg1Of","subj":"T1604","obj":"T1602"},{"id":"R1053","pred":"arg2Of","subj":"T1606","obj":"T1604"},{"id":"R1054","pred":"arg1Of","subj":"T1606","obj":"T1605"},{"id":"R1055","pred":"arg1Of","subj":"T1606","obj":"T1608"},{"id":"R1056","pred":"arg3Of","subj":"T1608","obj":"T1604"},{"id":"R1057","pred":"arg1Of","subj":"T1608","obj":"T1607"},{"id":"R1058","pred":"arg1Of","subj":"T1608","obj":"T1622"},{"id":"R1059","pred":"arg1Of","subj":"T1608","obj":"T1625"},{"id":"R1060","pred":"arg1Of","subj":"T1611","obj":"T1609"},{"id":"R1061","pred":"arg1Of","subj":"T1611","obj":"T1610"},{"id":"R1062","pred":"arg1Of","subj":"T1611","obj":"T1612"},{"id":"R1063","pred":"arg2Of","subj":"T1612","obj":"T1608"},{"id":"R1064","pred":"arg2Of","subj":"T1614","obj":"T1612"},{"id":"R1065","pred":"arg1Of","subj":"T1614","obj":"T1613"},{"id":"R1066","pred":"arg1Of","subj":"T1614","obj":"T1615"},{"id":"R1067","pred":"arg1Of","subj":"T1614","obj":"T1621"},{"id":"R1068","pred":"arg1Of","subj":"T1617","obj":"T1618"},{"id":"R1069","pred":"arg2Of","subj":"T1619","obj":"T1618"},{"id":"R1070","pred":"arg2Of","subj":"T1620","obj":"T1615"},{"id":"R1071","pred":"arg1Of","subj":"T1620","obj":"T1616"},{"id":"R1072","pred":"arg1Of","subj":"T1620","obj":"T1617"},{"id":"R1073","pred":"arg1Of","subj":"T1620","obj":"T1619"},{"id":"R1074","pred":"arg2Of","subj":"T1624","obj":"T1622"},{"id":"R1075","pred":"arg1Of","subj":"T1624","obj":"T1623"},{"id":"R1076","pred":"arg2Of","subj":"T1626","obj":"T1625"},{"id":"R1077","pred":"arg1Of","subj":"T1628","obj":"T1627"},{"id":"R1078","pred":"arg1Of","subj":"T1628","obj":"T1629"},{"id":"R1079","pred":"arg1Of","subj":"T1631","obj":"T1632"},{"id":"R1080","pred":"arg2Of","subj":"T1631","obj":"T1633"},{"id":"R1081","pred":"arg2Of","subj":"T1633","obj":"T1629"},{"id":"R1082","pred":"arg1Of","subj":"T1633","obj":"T1630"},{"id":"R1083","pred":"arg2Of","subj":"T1633","obj":"T1632"},{"id":"R1084","pred":"arg1Of","subj":"T1633","obj":"T1634"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T944","span":{"begin":175,"end":179},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1838","span":{"begin":228,"end":231},"obj":"http://www.uniprot.org/uniprot/Q9Y243"},{"id":"T1837","span":{"begin":138,"end":141},"obj":"http://www.uniprot.org/uniprot/Q9Y243"},{"id":"T1827","span":{"begin":228,"end":231},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T1826","span":{"begin":138,"end":141},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T1816","span":{"begin":228,"end":231},"obj":"http://www.uniprot.org/uniprot/P31749"},{"id":"T1815","span":{"begin":138,"end":141},"obj":"http://www.uniprot.org/uniprot/P31749"},{"id":"T1802","span":{"begin":175,"end":179},"obj":"http://www.uniprot.org/uniprot/Q13546"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1034","span":{"begin":146,"end":149},"obj":"http://purl.obolibrary.org/obo/GO_0004705"},{"id":"T986","span":{"begin":194,"end":205},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T967","span":{"begin":194,"end":205},"obj":"http://purl.obolibrary.org/obo/GO_0070266"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T1053","span":{"begin":146,"end":149},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
sentences
{"project":"sentences","denotations":[{"id":"T896","span":{"begin":22,"end":206},"obj":"Sentence"},{"id":"T30","span":{"begin":22,"end":206},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
simple1
{"project":"simple1","denotations":[{"id":"T1078","span":{"begin":175,"end":179},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T1772","span":{"begin":235,"end":244},"obj":"Positive_regulation"},{"id":"T1762","span":{"begin":175,"end":179},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T2146","span":{"begin":235,"end":244},"obj":"Positive_regulation"},{"id":"T2134","span":{"begin":175,"end":179},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T1893","span":{"begin":235,"end":244},"obj":"Positive_regulation"},{"id":"T1881","span":{"begin":175,"end":179},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T2792","span":{"begin":175,"end":179},"obj":"Protein"},{"id":"T2786","span":{"begin":175,"end":186},"obj":"Protein"},{"id":"T2781","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T2735","span":{"begin":228,"end":231},"obj":"Protein"},{"id":"T2731","span":{"begin":146,"end":149},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2552","span":{"begin":245,"end":252},"obj":"IN"},{"id":"T2551","span":{"begin":235,"end":244},"obj":"VBN"},{"id":"T2550","span":{"begin":232,"end":234},"obj":"VBZ"},{"id":"T2549","span":{"begin":228,"end":231},"obj":"NNP"},{"id":"T2548","span":{"begin":223,"end":227},"obj":"IN"},{"id":"T2547","span":{"begin":216,"end":222},"obj":"VBP"},{"id":"T2546","span":{"begin":211,"end":215},"obj":"NNS"},{"id":"T2545","span":{"begin":207,"end":210},"obj":"PRP$"},{"id":"T2544","span":{"begin":205,"end":206},"obj":"."},{"id":"T2543","span":{"begin":194,"end":205},"obj":"NN"},{"id":"T2542","span":{"begin":187,"end":193},"obj":"IN"},{"id":"T2541","span":{"begin":180,"end":186},"obj":"NN"},{"id":"T2540","span":{"begin":175,"end":179},"obj":"CD"},{"id":"T2539","span":{"begin":170,"end":174},"obj":"IN"},{"id":"T2538","span":{"begin":159,"end":169},"obj":"JJ"},{"id":"T2537","span":{"begin":150,"end":158},"obj":"NNS"},{"id":"T2536","span":{"begin":146,"end":149},"obj":"NNP"},{"id":"T2535","span":{"begin":142,"end":145},"obj":"CC"},{"id":"T2534","span":{"begin":138,"end":141},"obj":"NNP"},{"id":"T2533","span":{"begin":134,"end":137},"obj":"DT"},{"id":"T2532","span":{"begin":131,"end":133},"obj":"IN"},{"id":"T2531","span":{"begin":122,"end":130},"obj":"VBG"},{"id":"T2530","span":{"begin":112,"end":121},"obj":"JJ"},{"id":"T2529","span":{"begin":108,"end":111},"obj":"CC"},{"id":"T2528","span":{"begin":94,"end":107},"obj":"NNS"},{"id":"T2527","span":{"begin":85,"end":93},"obj":"JJ"},{"id":"T2526","span":{"begin":81,"end":84},"obj":"DT"},{"id":"T2525","span":{"begin":71,"end":80},"obj":"VB"},{"id":"T2524","span":{"begin":68,"end":70},"obj":"TO"},{"id":"T2523","span":{"begin":55,"end":67},"obj":"NNS"},{"id":"T2522","span":{"begin":49,"end":54},"obj":"DT"},{"id":"T2521","span":{"begin":40,"end":48},"obj":"VBD"},{"id":"T2520","span":{"begin":37,"end":39},"obj":"PRP"},{"id":"T2519","span":{"begin":35,"end":36},"obj":","},{"id":"T2518","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T2517","span":{"begin":25,"end":29},"obj":"DT"},{"id":"T2516","span":{"begin":22,"end":24},"obj":"IN"},{"id":"T2515","span":{"begin":20,"end":21},"obj":"."},{"id":"T2514","span":{"begin":12,"end":20},"obj":"VBN"},{"id":"T2513","span":{"begin":7,"end":11},"obj":"VBN"},{"id":"T2512","span":{"begin":3,"end":6},"obj":"RB"}],"relations":[{"id":"R1773","pred":"neg","subj":"T2512","obj":"T2514"},{"id":"R1775","pred":"auxpass","subj":"T2513","obj":"T2514"},{"id":"R1776","pred":"ROOT","subj":"T2514","obj":"T2514"},{"id":"R1777","pred":"punct","subj":"T2515","obj":"T2514"},{"id":"R1779","pred":"prep","subj":"T2516","obj":"T2521"},{"id":"R1780","pred":"det","subj":"T2517","obj":"T2518"},{"id":"R1781","pred":"pobj","subj":"T2518","obj":"T2516"},{"id":"R1783","pred":"punct","subj":"T2519","obj":"T2521"},{"id":"R1784","pred":"nsubj","subj":"T2520","obj":"T2521"},{"id":"R1785","pred":"ROOT","subj":"T2521","obj":"T2521"},{"id":"R1787","pred":"det","subj":"T2522","obj":"T2523"},{"id":"R1788","pred":"dobj","subj":"T2523","obj":"T2521"},{"id":"R1789","pred":"aux","subj":"T2524","obj":"T2525"},{"id":"R1791","pred":"advcl","subj":"T2525","obj":"T2521"},{"id":"R1792","pred":"det","subj":"T2526","obj":"T2528"},{"id":"R1793","pred":"amod","subj":"T2527","obj":"T2528"},{"id":"R1795","pred":"dobj","subj":"T2528","obj":"T2525"},{"id":"R1796","pred":"cc","subj":"T2529","obj":"T2528"},{"id":"R1797","pred":"amod","subj":"T2530","obj":"T2531"},{"id":"R1799","pred":"conj","subj":"T2531","obj":"T2528"},{"id":"R1800","pred":"prep","subj":"T2532","obj":"T2531"},{"id":"R1803","pred":"det","subj":"T2533","obj":"T2534"},{"id":"R1806","pred":"nmod","subj":"T2534","obj":"T2537"},{"id":"R1807","pred":"cc","subj":"T2535","obj":"T2534"},{"id":"R1809","pred":"conj","subj":"T2536","obj":"T2534"},{"id":"R1811","pred":"pobj","subj":"T2537","obj":"T2532"},{"id":"R1813","pred":"amod","subj":"T2538","obj":"T2537"},{"id":"R1816","pred":"prep","subj":"T2539","obj":"T2538"},{"id":"R1818","pred":"nummod","subj":"T2540","obj":"T2541"},{"id":"R1819","pred":"pobj","subj":"T2541","obj":"T2539"},{"id":"R1821","pred":"prep","subj":"T2542","obj":"T2531"},{"id":"R1822","pred":"pobj","subj":"T2543","obj":"T2542"},{"id":"R1823","pred":"punct","subj":"T2544","obj":"T2521"},{"id":"R1825","pred":"poss","subj":"T2545","obj":"T2546"},{"id":"R1826","pred":"nsubj","subj":"T2546","obj":"T2547"},{"id":"R1827","pred":"ROOT","subj":"T2547","obj":"T2547"},{"id":"R1829","pred":"mark","subj":"T2548","obj":"T2551"},{"id":"R1830","pred":"nsubjpass","subj":"T2549","obj":"T2551"},{"id":"R1832","pred":"auxpass","subj":"T2550","obj":"T2551"},{"id":"R1833","pred":"ccomp","subj":"T2551","obj":"T2547"},{"id":"R1834","pred":"prep","subj":"T2552","obj":"T2551"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T2191","span":{"begin":235,"end":244},"obj":"Positive_regulation"},{"id":"T2189","span":{"begin":228,"end":231},"obj":"Protein"},{"id":"T2188","span":{"begin":175,"end":186},"obj":"Protein"},{"id":"T2187","span":{"begin":146,"end":149},"obj":"Protein"},{"id":"T2186","span":{"begin":138,"end":141},"obj":"Protein"}],"relations":[{"id":"R1479","pred":"themeOf","subj":"T2189","obj":"T2191"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}
test3
{"project":"test3","denotations":[{"id":"T838","span":{"begin":175,"end":179},"obj":"Protein"},{"id":"T862","span":{"begin":235,"end":244},"obj":"Positive_regulation"},{"id":"T861","span":{"begin":175,"end":179},"obj":"Protein"}],"text":"as not been explored.\nIn this study, we expanded these observations to delineate the specific contributions and molecular ordering of the Akt and JNK pathways downstream from RIP1 kinase during necroptosis. Our data reveal that Akt is activated through "}