PMC:3585731 / 13220-13292 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3585731","sourcedb":"PMC","sourceid":"3585731","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3585731","text":"RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis.","tracks":[{"project":"testone","denotations":[{"id":"T29388","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29387","span":{"begin":12,"end":21},"obj":"Regulation"},{"id":"T29382","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R20360","pred":"themeOf","subj":"T29388","obj":"T29387"}],"attributes":[{"subj":"T29388","pred":"source","obj":"testone"},{"subj":"T29387","pred":"source","obj":"testone"},{"subj":"T29382","pred":"source","obj":"testone"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T29540","span":{"begin":60,"end":71},"obj":"NN"},{"id":"T29539","span":{"begin":53,"end":59},"obj":"IN"},{"id":"T29538","span":{"begin":49,"end":52},"obj":"NN"},{"id":"T29537","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T29536","span":{"begin":41,"end":44},"obj":"NN"},{"id":"T29535","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T29534","span":{"begin":22,"end":37},"obj":"NN"},{"id":"T29533","span":{"begin":5,"end":21},"obj":"JJ"},{"id":"T29532","span":{"begin":0,"end":4},"obj":"NN"}],"relations":[{"id":"R20455","pred":"arg1Of","subj":"T29534","obj":"T29532"},{"id":"R20456","pred":"arg1Of","subj":"T29534","obj":"T29533"},{"id":"R20457","pred":"arg1Of","subj":"T29534","obj":"T29535"},{"id":"R20458","pred":"arg1Of","subj":"T29534","obj":"T29539"},{"id":"R20459","pred":"arg1Of","subj":"T29536","obj":"T29537"},{"id":"R20460","pred":"arg2Of","subj":"T29537","obj":"T29535"},{"id":"R20461","pred":"arg2Of","subj":"T29538","obj":"T29537"},{"id":"R20462","pred":"arg2Of","subj":"T29540","obj":"T29539"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T29540","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29539","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29538","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29537","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29536","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29535","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29534","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29533","pred":"source","obj":"pmc-enju-pas"},{"subj":"T29532","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T29409","span":{"begin":0,"end":4},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T29409","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T29652","span":{"begin":41,"end":44},"obj":"http://www.uniprot.org/uniprot/Q9Y243"},{"id":"T29651","span":{"begin":41,"end":44},"obj":"http://www.uniprot.org/uniprot/P31751"},{"id":"T29650","span":{"begin":41,"end":44},"obj":"http://www.uniprot.org/uniprot/P31749"},{"id":"T29649","span":{"begin":0,"end":4},"obj":"http://www.uniprot.org/uniprot/Q13546"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T29652","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T29651","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T29650","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T29649","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T29417","span":{"begin":60,"end":71},"obj":"http://purl.obolibrary.org/obo/GO_0097528"},{"id":"T29416","span":{"begin":60,"end":71},"obj":"http://purl.obolibrary.org/obo/GO_0070266"},{"id":"T29415","span":{"begin":49,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0004705"},{"id":"T29414","span":{"begin":22,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0016310"}],"attributes":[{"subj":"T29417","pred":"source","obj":"GO-BP"},{"subj":"T29416","pred":"source","obj":"GO-BP"},{"subj":"T29415","pred":"source","obj":"GO-BP"},{"subj":"T29414","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T29418","span":{"begin":49,"end":52},"obj":"http://purl.obolibrary.org/obo/GO_0004705"}],"attributes":[{"subj":"T29418","pred":"source","obj":"GO-MF"}]},{"project":"sentences","denotations":[{"id":"T29402","span":{"begin":0,"end":72},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T29402","pred":"source","obj":"sentences"}]},{"project":"simple1","denotations":[{"id":"T29433","span":{"begin":0,"end":4},"obj":"Protein"}],"attributes":[{"subj":"T29433","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T29648","span":{"begin":5,"end":21},"obj":"Regulation"},{"id":"T29647","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29642","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R20562","pred":"themeOf","subj":"T29642","obj":"T29647"},{"id":"R20563","pred":"themeOf","subj":"T29647","obj":"T29648"}],"attributes":[{"subj":"T29648","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T29647","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T29642","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T29677","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29676","span":{"begin":5,"end":21},"obj":"Regulation"},{"id":"T29671","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R20568","pred":"themeOf","subj":"T29671","obj":"T29677"},{"id":"R20569","pred":"themeOf","subj":"T29677","obj":"T29676"}],"attributes":[{"subj":"T29677","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T29676","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T29671","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T29662","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29657","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T29663","span":{"begin":5,"end":21},"obj":"Regulation"}],"relations":[{"id":"R20564","pred":"themeOf","subj":"T29657","obj":"T29662"},{"id":"R20565","pred":"themeOf","subj":"T29662","obj":"T29663"}],"attributes":[{"subj":"T29662","pred":"source","obj":"DLUT931"},{"subj":"T29657","pred":"source","obj":"DLUT931"},{"subj":"T29663","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T29720","span":{"begin":0,"end":71},"obj":"Phosphorylation"},{"id":"T29719","span":{"begin":0,"end":71},"obj":"Phosphorylation"},{"id":"T29718","span":{"begin":0,"end":71},"obj":"Regulation"},{"id":"T29717","span":{"begin":0,"end":71},"obj":"Regulation"},{"id":"T29709","span":{"begin":5,"end":21},"obj":"Protein"},{"id":"T29707","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T29706","span":{"begin":41,"end":44},"obj":"Protein"},{"id":"T29705","span":{"begin":49,"end":52},"obj":"Protein"}],"relations":[{"id":"R20582","pred":"themeOf","subj":"T29705","obj":"T29719"},{"id":"R20583","pred":"themeOf","subj":"T29706","obj":"T29720"},{"id":"R20584","pred":"causeOf","subj":"T29707","obj":"T29719"},{"id":"R20585","pred":"causeOf","subj":"T29707","obj":"T29720"},{"id":"R20586","pred":"causeOf","subj":"T29709","obj":"T29717"},{"id":"R20587","pred":"causeOf","subj":"T29709","obj":"T29718"},{"id":"R20588","pred":"themeOf","subj":"T29719","obj":"T29717"},{"id":"R20589","pred":"themeOf","subj":"T29720","obj":"T29718"}],"attributes":[{"subj":"T29720","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29719","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29718","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29717","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29709","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29707","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29706","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T29705","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T29447","span":{"begin":71,"end":72},"obj":"."},{"id":"T29446","span":{"begin":60,"end":71},"obj":"NN"},{"id":"T29445","span":{"begin":53,"end":59},"obj":"IN"},{"id":"T29444","span":{"begin":49,"end":52},"obj":"NNP"},{"id":"T29443","span":{"begin":45,"end":48},"obj":"CC"},{"id":"T29442","span":{"begin":41,"end":44},"obj":"NNP"},{"id":"T29441","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T29440","span":{"begin":22,"end":37},"obj":"NN"},{"id":"T29439","span":{"begin":5,"end":21},"obj":"JJ"},{"id":"T29438","span":{"begin":0,"end":4},"obj":"CD"}],"relations":[{"id":"R20361","pred":"nummod","subj":"T29438","obj":"T29440"},{"id":"R20362","pred":"amod","subj":"T29439","obj":"T29440"},{"id":"R20363","pred":"ROOT","subj":"T29440","obj":"T29440"},{"id":"R20364","pred":"prep","subj":"T29441","obj":"T29440"},{"id":"R20365","pred":"pobj","subj":"T29442","obj":"T29441"},{"id":"R20366","pred":"cc","subj":"T29443","obj":"T29442"},{"id":"R20367","pred":"conj","subj":"T29444","obj":"T29442"},{"id":"R20368","pred":"prep","subj":"T29445","obj":"T29440"},{"id":"R20369","pred":"pobj","subj":"T29446","obj":"T29445"},{"id":"R20370","pred":"punct","subj":"T29447","obj":"T29440"}],"attributes":[{"subj":"T29447","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29446","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29445","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29444","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29443","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29442","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29441","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29440","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29439","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T29438","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T29684","span":{"begin":12,"end":21},"obj":"Positive_regulation"},{"id":"T29683","span":{"begin":12,"end":21},"obj":"Positive_regulation"},{"id":"T29682","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29681","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29680","span":{"begin":49,"end":52},"obj":"Protein"},{"id":"T29679","span":{"begin":41,"end":44},"obj":"Protein"},{"id":"T29678","span":{"begin":0,"end":11},"obj":"Protein"}],"relations":[{"id":"R20570","pred":"causeOf","subj":"T29678","obj":"T29683"},{"id":"R20571","pred":"causeOf","subj":"T29678","obj":"T29684"},{"id":"R20572","pred":"themeOf","subj":"T29679","obj":"T29681"},{"id":"R20573","pred":"themeOf","subj":"T29680","obj":"T29682"},{"id":"R20574","pred":"themeOf","subj":"T29681","obj":"T29683"},{"id":"R20575","pred":"themeOf","subj":"T29682","obj":"T29684"}],"attributes":[{"subj":"T29684","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T29683","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T29682","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T29681","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T29680","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T29679","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T29678","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"test3","denotations":[{"id":"T29395","span":{"begin":22,"end":37},"obj":"Phosphorylation"},{"id":"T29394","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T29389","span":{"begin":0,"end":4},"obj":"Protein"}],"attributes":[{"subj":"T29395","pred":"source","obj":"test3"},{"subj":"T29394","pred":"source","obj":"test3"},{"subj":"T29389","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"testone","color":"#a4ec93","default":true},{"id":"pmc-enju-pas","color":"#ec93bf"},{"id":"bionlp-st-ge-2016-test-proteins","color":"#93d9ec"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ece593"},{"id":"GO-BP","color":"#cb93ec"},{"id":"GO-MF","color":"#93ecb1"},{"id":"sentences","color":"#ec9793"},{"id":"simple1","color":"#93a8ec"},{"id":"BioNLP16_DUT","color":"#c2ec93"},{"id":"BioNLP16_Messiy","color":"#ec93dc"},{"id":"DLUT931","color":"#93ece1"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#ecc793"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ad93ec"},{"id":"bionlp-st-ge-2016-test-tees","color":"#93ec93"},{"id":"test3","color":"#ec93ac"}]}]}}