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PMC:3585731 / 13220-13292 JSONTXT

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testone

Id Subject Object Predicate Lexical cue
T29388 22-37 Phosphorylation denotes phosphorylation
T29387 12-21 Regulation denotes dependent
T29382 0-4 Protein denotes RIP1
R20360 T29388 T29387 themeOf phosphorylation,dependent

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T29540 60-71 NN denotes necroptosis
T29539 53-59 IN denotes during
T29538 49-52 NN denotes JNK
T29537 45-48 CC denotes and
T29536 41-44 NN denotes Akt
T29535 38-40 IN denotes of
T29534 22-37 NN denotes phosphorylation
T29533 5-21 JJ denotes kinase-dependent
T29532 0-4 NN denotes RIP1
R20455 T29534 T29532 arg1Of phosphorylation,RIP1
R20456 T29534 T29533 arg1Of phosphorylation,kinase-dependent
R20457 T29534 T29535 arg1Of phosphorylation,of
R20458 T29534 T29539 arg1Of phosphorylation,during
R20459 T29536 T29537 arg1Of Akt,and
R20460 T29537 T29535 arg2Of and,of
R20461 T29538 T29537 arg2Of JNK,and
R20462 T29540 T29539 arg2Of necroptosis,during

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T29409 0-4 Protein denotes RIP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T29652 41-44 http://www.uniprot.org/uniprot/Q9Y243 denotes Akt
T29651 41-44 http://www.uniprot.org/uniprot/P31751 denotes Akt
T29650 41-44 http://www.uniprot.org/uniprot/P31749 denotes Akt
T29649 0-4 http://www.uniprot.org/uniprot/Q13546 denotes RIP1

GO-BP

Id Subject Object Predicate Lexical cue
T29417 60-71 http://purl.obolibrary.org/obo/GO_0097528 denotes necroptosis
T29416 60-71 http://purl.obolibrary.org/obo/GO_0070266 denotes necroptosis
T29415 49-52 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK
T29414 22-37 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-MF

Id Subject Object Predicate Lexical cue
T29418 49-52 http://purl.obolibrary.org/obo/GO_0004705 denotes JNK

sentences

Id Subject Object Predicate Lexical cue
T29402 0-72 Sentence denotes RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis.

simple1

Id Subject Object Predicate Lexical cue
T29433 0-4 Protein denotes RIP1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T29648 5-21 Regulation denotes kinase-dependent
T29647 22-37 Phosphorylation denotes phosphorylation
T29642 0-4 Protein denotes RIP1
R20562 T29642 T29647 themeOf RIP1,phosphorylation
R20563 T29647 T29648 themeOf phosphorylation,kinase-dependent

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T29677 22-37 Phosphorylation denotes phosphorylation
T29676 5-21 Regulation denotes kinase-dependent
T29671 0-4 Protein denotes RIP1
R20568 T29671 T29677 themeOf RIP1,phosphorylation
R20569 T29677 T29676 themeOf phosphorylation,kinase-dependent

DLUT931

Id Subject Object Predicate Lexical cue
T29662 22-37 Phosphorylation denotes phosphorylation
T29657 0-4 Protein denotes RIP1
T29663 5-21 Regulation denotes kinase-dependent
R20564 T29657 T29662 themeOf RIP1,phosphorylation
R20565 T29662 T29663 themeOf phosphorylation,kinase-dependent

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T29720 0-71 Phosphorylation denotes RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
T29719 0-71 Phosphorylation denotes RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
T29718 0-71 Regulation denotes RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
T29717 0-71 Regulation denotes RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
T29709 5-21 Protein denotes kinase-dependent
T29707 0-4 Protein denotes RIP1
T29706 41-44 Protein denotes Akt
T29705 49-52 Protein denotes JNK
R20582 T29705 T29719 themeOf JNK,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20583 T29706 T29720 themeOf Akt,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20584 T29707 T29719 causeOf RIP1,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20585 T29707 T29720 causeOf RIP1,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20586 T29709 T29717 causeOf kinase-dependent,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20587 T29709 T29718 causeOf kinase-dependent,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20588 T29719 T29717 themeOf RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis
R20589 T29720 T29718 themeOf RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T29447 71-72 . denotes .
T29446 60-71 NN denotes necroptosis
T29445 53-59 IN denotes during
T29444 49-52 NNP denotes JNK
T29443 45-48 CC denotes and
T29442 41-44 NNP denotes Akt
T29441 38-40 IN denotes of
T29440 22-37 NN denotes phosphorylation
T29439 5-21 JJ denotes kinase-dependent
T29438 0-4 CD denotes RIP1
R20361 T29438 T29440 nummod RIP1,phosphorylation
R20362 T29439 T29440 amod kinase-dependent,phosphorylation
R20363 T29440 T29440 ROOT phosphorylation,phosphorylation
R20364 T29441 T29440 prep of,phosphorylation
R20365 T29442 T29441 pobj Akt,of
R20366 T29443 T29442 cc and,Akt
R20367 T29444 T29442 conj JNK,Akt
R20368 T29445 T29440 prep during,phosphorylation
R20369 T29446 T29445 pobj necroptosis,during
R20370 T29447 T29440 punct .,phosphorylation

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T29684 12-21 Positive_regulation denotes dependent
T29683 12-21 Positive_regulation denotes dependent
T29682 22-37 Phosphorylation denotes phosphorylation
T29681 22-37 Phosphorylation denotes phosphorylation
T29680 49-52 Protein denotes JNK
T29679 41-44 Protein denotes Akt
T29678 0-11 Protein denotes RIP1 kinase
R20570 T29678 T29683 causeOf RIP1 kinase,dependent
R20571 T29678 T29684 causeOf RIP1 kinase,dependent
R20572 T29679 T29681 themeOf Akt,phosphorylation
R20573 T29680 T29682 themeOf JNK,phosphorylation
R20574 T29681 T29683 themeOf phosphorylation,dependent
R20575 T29682 T29684 themeOf phosphorylation,dependent

test3

Id Subject Object Predicate Lexical cue
T29395 22-37 Phosphorylation denotes phosphorylation
T29394 0-4 Protein denotes RIP1
T29389 0-4 Protein denotes RIP1