PMC:3585731 / 13176-13740
Annnotations
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29388 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29387 | 56-65 | Regulation | denotes | dependent |
| T29386 | 456-460 | Protein | denotes | bFGF |
| T29385 | 448-452 | Protein | denotes | bFGF |
| T29384 | 284-288 | Protein | denotes | bFGF |
| T29383 | 162-166 | Protein | denotes | TNFα |
| T29382 | 44-48 | Protein | denotes | RIP1 |
| R20360 | T29388 | T29387 | themeOf | phosphorylation,dependent |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29552 | 167-170 | IN | denotes | for |
| T29630 | 553-563 | NN | denotes | antibodies |
| T29629 | 543-552 | JJ | denotes | indicated |
| T29628 | 539-542 | DT | denotes | the |
| T29627 | 534-538 | IN | denotes | with |
| T29626 | 529-533 | NN | denotes | blot |
| T29625 | 521-528 | JJ | denotes | western |
| T29624 | 518-520 | IN | denotes | by |
| T29623 | 509-517 | VB | denotes | followed |
| T29622 | 506-508 | NN | denotes | hr |
| T29621 | 504-505 | CD | denotes | 9 |
| T29620 | 501-503 | CC | denotes | or |
| T29619 | 497-500 | NN | denotes | min |
| T29618 | 494-496 | CD | denotes | 15 |
| T29617 | 490-493 | IN | denotes | for |
| T29616 | 488-489 | -RRB- | denotes | ) |
| T29615 | 478-488 | NN | denotes | conditions |
| T29614 | 473-477 | JJ | denotes | free |
| T29613 | 467-472 | NN | denotes | serum |
| T29612 | 466-467 | -LRB- | denotes | ( |
| T29611 | 456-465 | NN | denotes | bFGF/zVAD |
| T29610 | 453-455 | CC | denotes | or |
| T29609 | 448-452 | NN | denotes | bFGF |
| T29608 | 443-447 | IN | denotes | with |
| T29607 | 432-442 | VB | denotes | stimulated |
| T29606 | 426-431 | NN | denotes | cells |
| T29605 | 422-425 | DT | denotes | the |
| T29604 | 419-421 | TO | denotes | to |
| T29603 | 413-418 | VB | denotes | added |
| T29602 | 409-412 | VB | denotes | was |
| T29601 | 403-408 | NN | denotes | Nec-1 |
| T29600 | 401-402 | -RRB- | denotes | ) |
| T29599 | 400-401 | NN | denotes | D |
| T29598 | 399-400 | -LRB- | denotes | ( |
| T29597 | 393-398 | NN | denotes | blot. |
| T29596 | 385-392 | JJ | denotes | western |
| T29595 | 381-384 | IN | denotes | for |
| T29594 | 374-380 | NN | denotes | points |
| T29593 | 369-373 | NN | denotes | time |
| T29592 | 359-368 | VB | denotes | indicated |
| T29591 | 355-358 | DT | denotes | the |
| T29590 | 352-354 | IN | denotes | at |
| T29589 | 342-351 | VB | denotes | collected |
| T29588 | 337-341 | VB | denotes | were |
| T29587 | 329-336 | NN | denotes | samples |
| T29586 | 325-328 | CC | denotes | and |
| T29585 | 323-324 | -RRB- | denotes | ) |
| T29584 | 322-323 | NN | denotes | C |
| T29583 | 320-321 | -COMMA- | denotes | , |
| T29582 | 310-320 | NN | denotes | conditions |
| T29581 | 305-309 | JJ | denotes | free |
| T29580 | 299-304 | NN | denotes | serum |
| T29579 | 298-299 | -LRB- | denotes | ( |
| T29578 | 284-297 | NN | denotes | bFGF/zVAD.fmk |
| T29577 | 281-283 | CC | denotes | or |
| T29576 | 279-280 | -RRB- | denotes | ) |
| T29575 | 278-279 | NN | denotes | B |
| T29574 | 277-278 | -LRB- | denotes | ( |
| T29573 | 268-276 | NN | denotes | zVAD.fmk |
| T29572 | 263-267 | IN | denotes | with |
| T29571 | 255-262 | VB | denotes | treated |
| T29570 | 250-254 | VB | denotes | were |
| T29569 | 244-249 | NN | denotes | cells |
| T29568 | 239-243 | NN | denotes | L929 |
| T29567 | 237-238 | -RRB- | denotes | ) |
| T29566 | 236-237 | NN | denotes | C |
| T29565 | 235-236 | -COMMA- | denotes | , |
| T29564 | 234-235 | NN | denotes | B |
| T29563 | 233-234 | -LRB- | denotes | ( |
| T29562 | 221-232 | NN | denotes | antibodies. |
| T29561 | 211-220 | VB | denotes | indicated |
| T29560 | 206-210 | IN | denotes | with |
| T29559 | 197-205 | NN | denotes | blotting |
| T29558 | 189-196 | JJ | denotes | western |
| T29557 | 186-188 | IN | denotes | by |
| T29556 | 177-185 | VB | denotes | followed |
| T29555 | 175-176 | -COMMA- | denotes | , |
| T29554 | 173-175 | NN | denotes | hr |
| T29553 | 171-172 | CD | denotes | 9 |
| T29551 | 162-166 | NN | denotes | TNFα |
| T29550 | 159-161 | CC | denotes | or |
| T29549 | 150-158 | NN | denotes | zVAD.fmk |
| T29548 | 145-149 | IN | denotes | with |
| T29547 | 137-144 | VB | denotes | treated |
| T29546 | 132-136 | VB | denotes | were |
| T29545 | 126-131 | NN | denotes | cells |
| T29544 | 121-125 | NN | denotes | L929 |
| T29543 | 119-120 | -RRB- | denotes | ) |
| T29542 | 118-119 | NN | denotes | A |
| T29541 | 117-118 | -LRB- | denotes | ( |
| T29540 | 104-115 | NN | denotes | necroptosis |
| T29539 | 97-103 | IN | denotes | during |
| T29538 | 93-96 | NN | denotes | JNK |
| T29537 | 89-92 | CC | denotes | and |
| T29536 | 85-88 | NN | denotes | Akt |
| T29535 | 82-84 | IN | denotes | of |
| T29534 | 66-81 | NN | denotes | phosphorylation |
| T29533 | 49-65 | JJ | denotes | kinase-dependent |
| T29532 | 44-48 | NN | denotes | RIP1 |
| R20455 | T29534 | T29532 | arg1Of | phosphorylation,RIP1 |
| R20456 | T29534 | T29533 | arg1Of | phosphorylation,kinase-dependent |
| R20457 | T29534 | T29535 | arg1Of | phosphorylation,of |
| R20458 | T29534 | T29539 | arg1Of | phosphorylation,during |
| R20459 | T29536 | T29537 | arg1Of | Akt,and |
| R20460 | T29537 | T29535 | arg2Of | and,of |
| R20461 | T29538 | T29537 | arg2Of | JNK,and |
| R20462 | T29540 | T29539 | arg2Of | necroptosis,during |
| R20463 | T29542 | T29541 | arg2Of | A,( |
| R20464 | T29543 | T29541 | arg3Of | ),( |
| R20465 | T29545 | T29541 | arg1Of | cells,( |
| R20466 | T29545 | T29544 | arg1Of | cells,L929 |
| R20467 | T29545 | T29546 | arg1Of | cells,were |
| R20468 | T29545 | T29547 | arg2Of | cells,treated |
| R20469 | T29547 | T29546 | arg2Of | treated,were |
| R20470 | T29547 | T29548 | arg1Of | treated,with |
| R20471 | T29547 | T29552 | arg1Of | treated,for |
| R20472 | T29547 | T29555 | arg1Of | treated,"," |
| R20473 | T29547 | T29556 | modOf | treated,followed |
| R20474 | T29549 | T29550 | arg1Of | zVAD.fmk,or |
| R20475 | T29550 | T29548 | arg2Of | or,with |
| R20476 | T29551 | T29550 | arg2Of | TNFα,or |
| R20477 | T29554 | T29552 | arg2Of | hr,for |
| R20478 | T29554 | T29553 | arg1Of | hr,9 |
| R20479 | T29559 | T29556 | arg1Of | blotting,followed |
| R20480 | T29559 | T29557 | arg2Of | blotting,by |
| R20481 | T29559 | T29558 | arg1Of | blotting,western |
| R20482 | T29559 | T29560 | arg1Of | blotting,with |
| R20483 | T29562 | T29560 | arg2Of | antibodies.,with |
| R20484 | T29562 | T29561 | arg2Of | antibodies.,indicated |
| R20485 | T29564 | T29563 | arg2Of | B,( |
| R20486 | T29564 | T29565 | arg1Of | B,"," |
| R20487 | T29564 | T29566 | arg1Of | B,C |
| R20488 | T29567 | T29563 | arg3Of | ),( |
| R20489 | T29569 | T29568 | arg1Of | cells,L929 |
| R20490 | T29569 | T29570 | arg1Of | cells,were |
| R20491 | T29569 | T29571 | arg2Of | cells,treated |
| R20492 | T29571 | T29570 | arg2Of | treated,were |
| R20493 | T29571 | T29572 | arg1Of | treated,with |
| R20494 | T29573 | T29574 | arg1Of | zVAD.fmk,( |
| R20495 | T29573 | T29577 | arg1Of | zVAD.fmk,or |
| R20496 | T29575 | T29574 | arg2Of | B,( |
| R20497 | T29576 | T29574 | arg3Of | ),( |
| R20498 | T29577 | T29572 | arg2Of | or,with |
| R20499 | T29578 | T29577 | arg2Of | bFGF/zVAD.fmk,or |
| R20500 | T29578 | T29579 | arg1Of | bFGF/zVAD.fmk,( |
| R20501 | T29582 | T29579 | arg2Of | conditions,( |
| R20502 | T29582 | T29580 | arg1Of | conditions,serum |
| R20503 | T29582 | T29581 | arg1Of | conditions,free |
| R20504 | T29582 | T29583 | arg1Of | conditions,"," |
| R20505 | T29584 | T29583 | arg2Of | C,"," |
| R20506 | T29585 | T29579 | arg3Of | ),( |
| R20507 | T29587 | T29588 | arg1Of | samples,were |
| R20508 | T29587 | T29589 | arg2Of | samples,collected |
| R20509 | T29589 | T29588 | arg2Of | collected,were |
| R20510 | T29589 | T29590 | arg1Of | collected,at |
| R20511 | T29594 | T29590 | arg2Of | points,at |
| R20512 | T29594 | T29591 | arg1Of | points,the |
| R20513 | T29594 | T29592 | arg2Of | points,indicated |
| R20514 | T29594 | T29593 | arg1Of | points,time |
| R20515 | T29594 | T29595 | arg1Of | points,for |
| R20516 | T29597 | T29595 | arg2Of | blot.,for |
| R20517 | T29597 | T29596 | arg1Of | blot.,western |
| R20518 | T29597 | T29598 | arg1Of | blot.,( |
| R20519 | T29599 | T29598 | arg2Of | D,( |
| R20520 | T29600 | T29598 | arg3Of | ),( |
| R20521 | T29601 | T29602 | arg1Of | Nec-1,was |
| R20522 | T29601 | T29603 | arg2Of | Nec-1,added |
| R20523 | T29603 | T29602 | arg2Of | added,was |
| R20524 | T29603 | T29604 | arg1Of | added,to |
| R20525 | T29606 | T29604 | arg2Of | cells,to |
| R20526 | T29606 | T29605 | arg1Of | cells,the |
| R20527 | T29606 | T29607 | arg2Of | cells,stimulated |
| R20528 | T29607 | T29608 | arg1Of | stimulated,with |
| R20529 | T29607 | T29617 | arg1Of | stimulated,for |
| R20530 | T29607 | T29623 | modOf | stimulated,followed |
| R20531 | T29609 | T29610 | arg1Of | bFGF,or |
| R20532 | T29610 | T29608 | arg2Of | or,with |
| R20533 | T29610 | T29612 | arg1Of | or,( |
| R20534 | T29611 | T29610 | arg2Of | bFGF/zVAD,or |
| R20535 | T29615 | T29612 | arg2Of | conditions,( |
| R20536 | T29615 | T29613 | arg1Of | conditions,serum |
| R20537 | T29615 | T29614 | arg1Of | conditions,free |
| R20538 | T29616 | T29612 | arg3Of | ),( |
| R20539 | T29619 | T29618 | arg1Of | min,15 |
| R20540 | T29619 | T29620 | arg1Of | min,or |
| R20541 | T29620 | T29617 | arg2Of | or,for |
| R20542 | T29622 | T29620 | arg2Of | hr,or |
| R20543 | T29622 | T29621 | arg1Of | hr,9 |
| R20544 | T29626 | T29623 | arg1Of | blot,followed |
| R20545 | T29626 | T29624 | arg2Of | blot,by |
| R20546 | T29626 | T29625 | arg1Of | blot,western |
| R20547 | T29626 | T29627 | arg1Of | blot,with |
| R20548 | T29630 | T29627 | arg2Of | antibodies,with |
| R20549 | T29630 | T29628 | arg1Of | antibodies,the |
| R20550 | T29630 | T29629 | arg1Of | antibodies,indicated |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29413 | 456-460 | Protein | denotes | bFGF |
| T29412 | 448-452 | Protein | denotes | bFGF |
| T29411 | 284-288 | Protein | denotes | bFGF |
| T29410 | 162-166 | Protein | denotes | TNFα |
| T29409 | 44-48 | Protein | denotes | RIP1 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29656 | 456-460 | http://www.uniprot.org/uniprot/Q788Q8 | denotes | bFGF |
| T29655 | 448-452 | http://www.uniprot.org/uniprot/Q788Q8 | denotes | bFGF |
| T29654 | 284-288 | http://www.uniprot.org/uniprot/Q788Q8 | denotes | bFGF |
| T29653 | 162-166 | http://www.uniprot.org/uniprot/P01375 | denotes | TNFα |
| T29652 | 85-88 | http://www.uniprot.org/uniprot/Q9Y243 | denotes | Akt |
| T29651 | 85-88 | http://www.uniprot.org/uniprot/P31751 | denotes | Akt |
| T29650 | 85-88 | http://www.uniprot.org/uniprot/P31749 | denotes | Akt |
| T29649 | 44-48 | http://www.uniprot.org/uniprot/Q13546 | denotes | RIP1 |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29401 | 467-472 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T29400 | 299-304 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29417 | 104-115 | http://purl.obolibrary.org/obo/GO_0097528 | denotes | necroptosis |
| T29416 | 104-115 | http://purl.obolibrary.org/obo/GO_0070266 | denotes | necroptosis |
| T29415 | 93-96 | http://purl.obolibrary.org/obo/GO_0004705 | denotes | JNK |
| T29414 | 66-81 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29420 | 553-563 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
| T29419 | 221-231 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
| T29418 | 93-96 | http://purl.obolibrary.org/obo/GO_0004705 | denotes | JNK |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29427 | 553-563 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
| T29426 | 221-231 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
| T29425 | 553-563 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
| T29424 | 221-231 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
| T29423 | 426-431 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T29422 | 244-249 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T29421 | 126-131 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29403 | 117-564 | Sentence | denotes | (A) L929 cells were treated with zVAD.fmk or TNFα for 9 hr, followed by western blotting with indicated antibodies. (B,C) L929 cells were treated with zVAD.fmk (B) or bFGF/zVAD.fmk (serum free conditions, C) and samples were collected at the indicated time points for western blot. (D) Nec-1 was added to the cells stimulated with bFGF or bFGF/zVAD (serum free conditions) for 15 min or 9 hr followed by western blot with the indicated antibodies. |
| T29402 | 44-116 | Sentence | denotes | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis. |
| T86 | 0-116 | Sentence | denotes | 10.1371/journal.pone.0056576.g003 Figure 3 RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis. |
| T87 | 117-564 | Sentence | denotes | (A) L929 cells were treated with zVAD.fmk or TNFα for 9 hr, followed by western blotting with indicated antibodies. (B,C) L929 cells were treated with zVAD.fmk (B) or bFGF/zVAD.fmk (serum free conditions, C) and samples were collected at the indicated time points for western blot. (D) Nec-1 was added to the cells stimulated with bFGF or bFGF/zVAD (serum free conditions) for 15 min or 9 hr followed by western blot with the indicated antibodies. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29437 | 456-460 | Protein | denotes | bFGF |
| T29436 | 448-452 | Protein | denotes | bFGF |
| T29435 | 284-288 | Protein | denotes | bFGF |
| T29434 | 162-166 | Protein | denotes | TNFα |
| T29433 | 44-48 | Protein | denotes | RIP1 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29648 | 49-65 | Regulation | denotes | kinase-dependent |
| T29647 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29646 | 456-460 | Protein | denotes | bFGF |
| T29645 | 448-452 | Protein | denotes | bFGF |
| T29644 | 284-288 | Protein | denotes | bFGF |
| T29643 | 162-166 | Protein | denotes | TNFα |
| T29642 | 44-48 | Protein | denotes | RIP1 |
| R20562 | T29642 | T29647 | themeOf | RIP1,phosphorylation |
| R20563 | T29647 | T29648 | themeOf | phosphorylation,kinase-dependent |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29677 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29676 | 49-65 | Regulation | denotes | kinase-dependent |
| T29675 | 456-460 | Protein | denotes | bFGF |
| T29674 | 448-452 | Protein | denotes | bFGF |
| T29673 | 284-288 | Protein | denotes | bFGF |
| T29672 | 162-166 | Protein | denotes | TNFα |
| T29671 | 44-48 | Protein | denotes | RIP1 |
| R20568 | T29671 | T29677 | themeOf | RIP1,phosphorylation |
| R20569 | T29677 | T29676 | themeOf | phosphorylation,kinase-dependent |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29662 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29661 | 456-460 | Protein | denotes | bFGF |
| T29660 | 448-452 | Protein | denotes | bFGF |
| T29659 | 284-288 | Protein | denotes | bFGF |
| T29658 | 162-166 | Protein | denotes | TNFα |
| T29657 | 44-48 | Protein | denotes | RIP1 |
| T29663 | 49-65 | Regulation | denotes | kinase-dependent |
| R20564 | T29657 | T29662 | themeOf | RIP1,phosphorylation |
| R20565 | T29662 | T29663 | themeOf | phosphorylation,kinase-dependent |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29720 | 44-115 | Phosphorylation | denotes | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| T29719 | 44-115 | Phosphorylation | denotes | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| T29718 | 44-115 | Regulation | denotes | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| T29717 | 44-115 | Regulation | denotes | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| T29716 | 403-408 | Protein | denotes | Nec-1 |
| T29715 | 456-460 | Protein | denotes | bFGF |
| T29714 | 162-205 | Protein | denotes | TNFα for 9 hr, followed by western blotting |
| T29713 | 448-452 | Protein | denotes | bFGF |
| T29712 | 268-280 | Entity | denotes | zVAD.fmk (B) |
| T29711 | 221-231 | Entity | denotes | antibodies |
| T29710 | 289-297 | Entity | denotes | zVAD.fmk |
| T29709 | 49-65 | Protein | denotes | kinase-dependent |
| T29708 | 150-158 | Entity | denotes | zVAD.fmk |
| T29707 | 44-48 | Protein | denotes | RIP1 |
| T29706 | 85-88 | Protein | denotes | Akt |
| T29705 | 93-96 | Protein | denotes | JNK |
| T29704 | 284-288 | Protein | denotes | bFGF |
| T29703 | 553-563 | Entity | denotes | antibodies |
| T29702 | 419-460 | Entity | denotes | to the cells stimulated with bFGF or bFGF |
| R20582 | T29705 | T29719 | themeOf | JNK,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20583 | T29706 | T29720 | themeOf | Akt,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20584 | T29707 | T29719 | causeOf | RIP1,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20585 | T29707 | T29720 | causeOf | RIP1,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20586 | T29709 | T29717 | causeOf | kinase-dependent,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20587 | T29709 | T29718 | causeOf | kinase-dependent,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20588 | T29719 | T29717 | themeOf | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
| R20589 | T29720 | T29718 | themeOf | RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis,RIP1 kinase-dependent phosphorylation of Akt and JNK during necroptosis |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29641 | 563-564 | . | denotes | . |
| T29640 | 553-563 | NNS | denotes | antibodies |
| T29639 | 543-552 | VBN | denotes | indicated |
| T29638 | 539-542 | DT | denotes | the |
| T29637 | 534-538 | IN | denotes | with |
| T29636 | 529-533 | NN | denotes | blot |
| T29635 | 521-528 | JJ | denotes | western |
| T29634 | 518-520 | IN | denotes | by |
| T29633 | 509-517 | VBN | denotes | followed |
| T29632 | 506-508 | NN | denotes | hr |
| T29631 | 504-505 | CD | denotes | 9 |
| T29531 | 501-503 | CC | denotes | or |
| T29530 | 497-500 | NN | denotes | min |
| T29529 | 494-496 | CD | denotes | 15 |
| T29528 | 490-493 | IN | denotes | for |
| T29527 | 488-489 | -RRB- | denotes | ) |
| T29526 | 478-488 | NNS | denotes | conditions |
| T29525 | 473-477 | JJ | denotes | free |
| T29524 | 467-472 | NN | denotes | serum |
| T29523 | 466-467 | -LRB- | denotes | ( |
| T29522 | 456-465 | NNP | denotes | bFGF/zVAD |
| T29521 | 453-455 | CC | denotes | or |
| T29520 | 448-452 | NNP | denotes | bFGF |
| T29519 | 443-447 | IN | denotes | with |
| T29518 | 432-442 | VBN | denotes | stimulated |
| T29517 | 426-431 | NNS | denotes | cells |
| T29516 | 422-425 | DT | denotes | the |
| T29515 | 419-421 | TO | denotes | to |
| T29514 | 413-418 | VBN | denotes | added |
| T29513 | 409-412 | VBD | denotes | was |
| T29512 | 403-408 | NN | denotes | Nec-1 |
| T29511 | 401-402 | -RRB- | denotes | ) |
| T29510 | 400-401 | NNP | denotes | D |
| T29509 | 399-400 | -LRB- | denotes | ( |
| T29508 | 397-398 | . | denotes | . |
| T29507 | 393-397 | NN | denotes | blot |
| T29506 | 385-392 | JJ | denotes | western |
| T29505 | 381-384 | IN | denotes | for |
| T29504 | 374-380 | NNS | denotes | points |
| T29503 | 369-373 | NN | denotes | time |
| T29502 | 359-368 | JJ | denotes | indicated |
| T29501 | 355-358 | DT | denotes | the |
| T29500 | 352-354 | IN | denotes | at |
| T29499 | 342-351 | VBN | denotes | collected |
| T29498 | 337-341 | VBD | denotes | were |
| T29497 | 329-336 | NNS | denotes | samples |
| T29496 | 325-328 | CC | denotes | and |
| T29495 | 323-324 | -RRB- | denotes | ) |
| T29494 | 322-323 | NNP | denotes | C |
| T29493 | 320-321 | , | denotes | , |
| T29492 | 310-320 | NNS | denotes | conditions |
| T29491 | 305-309 | JJ | denotes | free |
| T29490 | 299-304 | NN | denotes | serum |
| T29489 | 298-299 | -LRB- | denotes | ( |
| T29488 | 294-297 | NN | denotes | fmk |
| T29487 | 293-294 | . | denotes | . |
| T29486 | 284-293 | NNP | denotes | bFGF/zVAD |
| T29485 | 281-283 | CC | denotes | or |
| T29484 | 279-280 | -RRB- | denotes | ) |
| T29483 | 278-279 | NNP | denotes | B |
| T29482 | 277-278 | -LRB- | denotes | ( |
| T29481 | 268-276 | NNP | denotes | zVAD.fmk |
| T29480 | 263-267 | IN | denotes | with |
| T29479 | 255-262 | VBN | denotes | treated |
| T29478 | 250-254 | VBD | denotes | were |
| T29477 | 244-249 | NNS | denotes | cells |
| T29476 | 239-243 | NNP | denotes | L929 |
| T29475 | 237-238 | -RRB- | denotes | ) |
| T29474 | 236-237 | NNP | denotes | C |
| T29473 | 235-236 | , | denotes | , |
| T29472 | 234-235 | NNP | denotes | B |
| T29471 | 233-234 | -LRB- | denotes | ( |
| T29470 | 231-232 | . | denotes | . |
| T29469 | 221-231 | NNS | denotes | antibodies |
| T29468 | 211-220 | JJ | denotes | indicated |
| T29467 | 206-210 | IN | denotes | with |
| T29466 | 197-205 | VBG | denotes | blotting |
| T29465 | 189-196 | JJ | denotes | western |
| T29464 | 186-188 | IN | denotes | by |
| T29463 | 177-185 | VBN | denotes | followed |
| T29462 | 175-176 | , | denotes | , |
| T29461 | 173-175 | NN | denotes | hr |
| T29460 | 171-172 | CD | denotes | 9 |
| T29459 | 167-170 | IN | denotes | for |
| T29458 | 162-166 | NNP | denotes | TNFα |
| T29457 | 159-161 | CC | denotes | or |
| T29456 | 150-158 | NNP | denotes | zVAD.fmk |
| T29455 | 145-149 | IN | denotes | with |
| T29454 | 137-144 | VBN | denotes | treated |
| T29453 | 132-136 | VBD | denotes | were |
| T29452 | 126-131 | NNS | denotes | cells |
| T29451 | 121-125 | NNP | denotes | L929 |
| T29450 | 119-120 | -RRB- | denotes | ) |
| T29449 | 118-119 | NNP | denotes | A |
| T29448 | 117-118 | -LRB- | denotes | ( |
| T29447 | 115-116 | . | denotes | . |
| T29446 | 104-115 | NN | denotes | necroptosis |
| T29445 | 97-103 | IN | denotes | during |
| T29444 | 93-96 | NNP | denotes | JNK |
| T29443 | 89-92 | CC | denotes | and |
| T29442 | 85-88 | NNP | denotes | Akt |
| T29441 | 82-84 | IN | denotes | of |
| T29440 | 66-81 | NN | denotes | phosphorylation |
| T29439 | 49-65 | JJ | denotes | kinase-dependent |
| T29438 | 44-48 | CD | denotes | RIP1 |
| R20361 | T29438 | T29440 | nummod | RIP1,phosphorylation |
| R20362 | T29439 | T29440 | amod | kinase-dependent,phosphorylation |
| R20363 | T29440 | T29440 | ROOT | phosphorylation,phosphorylation |
| R20364 | T29441 | T29440 | prep | of,phosphorylation |
| R20365 | T29442 | T29441 | pobj | Akt,of |
| R20366 | T29443 | T29442 | cc | and,Akt |
| R20367 | T29444 | T29442 | conj | JNK,Akt |
| R20368 | T29445 | T29440 | prep | during,phosphorylation |
| R20369 | T29446 | T29445 | pobj | necroptosis,during |
| R20370 | T29447 | T29440 | punct | .,phosphorylation |
| R20371 | T29448 | T29454 | punct | (,treated |
| R20372 | T29449 | T29452 | nmod | A,cells |
| R20373 | T29450 | T29449 | punct | ),A |
| R20374 | T29451 | T29452 | compound | L929,cells |
| R20375 | T29452 | T29454 | nsubjpass | cells,treated |
| R20376 | T29453 | T29454 | auxpass | were,treated |
| R20377 | T29454 | T29454 | ROOT | treated,treated |
| R20378 | T29455 | T29454 | prep | with,treated |
| R20379 | T29456 | T29455 | pobj | zVAD.fmk,with |
| R20380 | T29457 | T29456 | cc | or,zVAD.fmk |
| R20381 | T29458 | T29456 | conj | TNFα,zVAD.fmk |
| R20382 | T29459 | T29454 | prep | for,treated |
| R20383 | T29460 | T29461 | nummod | 9,hr |
| R20384 | T29461 | T29459 | pobj | hr,for |
| R20385 | T29462 | T29454 | punct | ",",treated |
| R20386 | T29463 | T29454 | advcl | followed,treated |
| R20387 | T29464 | T29463 | agent | by,followed |
| R20388 | T29465 | T29466 | amod | western,blotting |
| R20389 | T29466 | T29464 | pobj | blotting,by |
| R20390 | T29467 | T29466 | prep | with,blotting |
| R20391 | T29468 | T29469 | amod | indicated,antibodies |
| R20392 | T29469 | T29467 | pobj | antibodies,with |
| R20393 | T29470 | T29454 | punct | .,treated |
| R20394 | T29471 | T29474 | punct | (,C |
| R20395 | T29472 | T29474 | nmod | B,C |
| R20396 | T29473 | T29474 | punct | ",",C |
| R20397 | T29474 | T29474 | ROOT | C,C |
| R20398 | T29475 | T29474 | punct | ),C |
| R20399 | T29476 | T29477 | compound | L929,cells |
| R20400 | T29477 | T29479 | nsubjpass | cells,treated |
| R20401 | T29478 | T29479 | auxpass | were,treated |
| R20402 | T29479 | T29479 | ROOT | treated,treated |
| R20403 | T29480 | T29479 | prep | with,treated |
| R20404 | T29481 | T29480 | pobj | zVAD.fmk,with |
| R20405 | T29482 | T29483 | punct | (,B |
| R20406 | T29483 | T29481 | appos | B,zVAD.fmk |
| R20407 | T29484 | T29481 | punct | ),zVAD.fmk |
| R20408 | T29485 | T29481 | cc | or,zVAD.fmk |
| R20409 | T29486 | T29481 | conj | bFGF/zVAD,zVAD.fmk |
| R20410 | T29487 | T29479 | punct | .,treated |
| R20411 | T29488 | T29492 | amod | fmk,conditions |
| R20412 | T29489 | T29492 | punct | (,conditions |
| R20413 | T29490 | T29492 | nmod | serum,conditions |
| R20414 | T29491 | T29492 | amod | free,conditions |
| R20415 | T29492 | T29499 | nsubjpass | conditions,collected |
| R20416 | T29493 | T29492 | punct | ",",conditions |
| R20417 | T29494 | T29492 | appos | C,conditions |
| R20418 | T29495 | T29494 | punct | ),C |
| R20419 | T29496 | T29492 | cc | and,conditions |
| R20420 | T29497 | T29492 | conj | samples,conditions |
| R20421 | T29498 | T29499 | auxpass | were,collected |
| R20422 | T29499 | T29499 | ROOT | collected,collected |
| R20423 | T29500 | T29499 | prep | at,collected |
| R20424 | T29501 | T29503 | det | the,time |
| R20425 | T29502 | T29503 | amod | indicated,time |
| R20426 | T29503 | T29500 | pobj | time,at |
| R20427 | T29504 | T29500 | pobj | points,at |
| R20428 | T29505 | T29504 | prep | for,points |
| R20429 | T29506 | T29507 | amod | western,blot |
| R20430 | T29507 | T29505 | pobj | blot,for |
| R20431 | T29508 | T29499 | punct | .,collected |
| R20432 | T29509 | T29514 | punct | (,added |
| R20433 | T29510 | T29512 | amod | D,Nec-1 |
| R20434 | T29511 | T29512 | punct | ),Nec-1 |
| R20435 | T29512 | T29514 | nsubjpass | Nec-1,added |
| R20436 | T29513 | T29514 | auxpass | was,added |
| R20437 | T29514 | T29514 | ROOT | added,added |
| R20438 | T29515 | T29514 | prep | to,added |
| R20439 | T29516 | T29517 | det | the,cells |
| R20440 | T29517 | T29515 | pobj | cells,to |
| R20441 | T29518 | T29517 | acl | stimulated,cells |
| R20442 | T29519 | T29518 | prep | with,stimulated |
| R20443 | T29520 | T29519 | pobj | bFGF,with |
| R20444 | T29521 | T29520 | cc | or,bFGF |
| R20445 | T29522 | T29520 | conj | bFGF/zVAD,bFGF |
| R20446 | T29523 | T29526 | punct | (,conditions |
| R20447 | T29524 | T29526 | nmod | serum,conditions |
| R20448 | T29525 | T29526 | amod | free,conditions |
| R20449 | T29526 | T29522 | parataxis | conditions,bFGF/zVAD |
| R20450 | T29527 | T29526 | punct | ),conditions |
| R20451 | T29528 | T29518 | prep | for,stimulated |
| R20452 | T29529 | T29632 | nummod | 15,hr |
| R20453 | T29530 | T29632 | nmod | min,hr |
| R20454 | T29531 | T29530 | cc | or,min |
| R20551 | T29631 | T29530 | nummod | 9,min |
| R20552 | T29632 | T29528 | pobj | hr,for |
| R20553 | T29633 | T29632 | acl | followed,hr |
| R20554 | T29634 | T29633 | agent | by,followed |
| R20555 | T29635 | T29636 | amod | western,blot |
| R20556 | T29636 | T29634 | pobj | blot,by |
| R20557 | T29637 | T29636 | prep | with,blot |
| R20558 | T29638 | T29640 | det | the,antibodies |
| R20559 | T29639 | T29640 | amod | indicated,antibodies |
| R20560 | T29640 | T29637 | pobj | antibodies,with |
| R20561 | T29641 | T29514 | punct | .,added |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29689 | 456-465 | Protein | denotes | bFGF/zVAD |
| T29688 | 448-452 | Protein | denotes | bFGF |
| T29687 | 284-297 | Protein | denotes | bFGF/zVAD.fmk |
| T29686 | 162-166 | Protein | denotes | TNFα |
| T29685 | 150-158 | Protein | denotes | zVAD.fmk |
| T29684 | 56-65 | Positive_regulation | denotes | dependent |
| T29683 | 56-65 | Positive_regulation | denotes | dependent |
| T29682 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29681 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29680 | 93-96 | Protein | denotes | JNK |
| T29679 | 85-88 | Protein | denotes | Akt |
| T29678 | 44-55 | Protein | denotes | RIP1 kinase |
| R20570 | T29678 | T29683 | causeOf | RIP1 kinase,dependent |
| R20571 | T29678 | T29684 | causeOf | RIP1 kinase,dependent |
| R20572 | T29679 | T29681 | themeOf | Akt,phosphorylation |
| R20573 | T29680 | T29682 | themeOf | JNK,phosphorylation |
| R20574 | T29681 | T29683 | themeOf | phosphorylation,dependent |
| R20575 | T29682 | T29684 | themeOf | phosphorylation,dependent |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29398 | 448-452 | Protein | denotes | bFGF |
| T29397 | 284-288 | Protein | denotes | bFGF |
| T29396 | 162-166 | Protein | denotes | TNFα |
| T29395 | 66-81 | Phosphorylation | denotes | phosphorylation |
| T29394 | 44-48 | Protein | denotes | RIP1 |
| T29393 | 456-460 | Protein | denotes | bFGF |
| T29392 | 448-452 | Protein | denotes | bFGF |
| T29391 | 284-288 | Protein | denotes | bFGF |
| T29390 | 162-166 | Protein | denotes | TNFα |
| T29389 | 44-48 | Protein | denotes | RIP1 |
| T29399 | 456-460 | Protein | denotes | bFGF |