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PMC:340383 / 9401-10071 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T2422 250-252 IN denotes in
T2421 237-243 RB denotes mostly
T2420 233-236 VBP denotes are
T2419 244-249 VBN denotes found
T2418 228-232 WDT denotes that
T2417 206-219 JJ denotes intracellular
T2416 220-227 NNS denotes modules
T2415 200-205 JJ denotes small
T2414 196-199 VBP denotes are
T2413 188-195 NNS denotes domains
T2412 184-187 NN denotes CBS
T2411 183-287 sentence denotes CBS domains are small intracellular modules that are mostly found in 2 or four copies within a protein.
T2410 182-183 . denotes .
T2409 168-173 NN denotes Amip3
T2408 162-167 NN denotes yeast
T2407 158-161 CC denotes and
T2406 174-182 NN denotes proteins
T2405 153-157 NN denotes CorC
T2404 144-152 NNS denotes bacteria
T2403 141-143 IN denotes in
T2402 131-134 VBP denotes are
T2401 135-140 VBN denotes found
T2400 126-130 WDT denotes that
T2399 113-118 NN denotes DUF21
T2398 119-125 NN denotes domain
T2397 111-112 DT denotes a
T2396 107-110 CC denotes and
T2395 95-98 NN denotes CBS
T2394 99-106 NNS denotes domains
T2393 91-94 CD denotes two
T2392 89-91 , denotes ,
T2497 591-592 -LRB- denotes (
T2496 644-649 VBN denotes found
T2495 575-576 HYPH denotes -
T2494 576-583 VBG denotes binding
T2493 571-575 NN denotes cNMP
T2492 584-590 NN denotes domain
T2491 569-570 DT denotes A
T2490 568-670 sentence denotes A cNMP-binding domain (cyclic nucleotide-monophosphate-binding domain) was found in all Acdp members.
T2489 567-568 . denotes .
T2488 555-558 NN denotes CBS
T2487 541-554 JJ denotes intracellular
T2486 559-566 NNS denotes domains
T2485 537-540 CD denotes two
T2484 534-536 IN denotes to
T2483 525-533 JJ denotes adjacent
T2482 516-524 NN denotes proteins
T2481 512-515 DT denotes the
T2480 509-511 IN denotes of
T2479 499-500 HYPH denotes -
T2478 498-499 NN denotes N
T2477 500-508 NN denotes terminus
T2476 494-497 DT denotes the
T2475 491-493 IN denotes in
T2474 480-482 VB denotes be
T2473 483-490 VBN denotes located
T2472 477-479 TO denotes to
T2471 471-476 VBN denotes found
T2470 467-470 CC denotes and
T2469 446-459 JJ denotes transmembrane
T2468 460-466 NN denotes region
T2467 444-445 DT denotes a
T2466 441-443 VBZ denotes is
T2465 434-440 NN denotes domain
T2464 429-433 DT denotes This
T2463 428-568 sentence denotes This domain is a transmembrane region and found to be located in the N-terminus of the proteins adjacent to two intracellular CBS domains .
T2462 427-428 . denotes .
T2461 419-427 NN denotes function
T2460 411-418 JJ denotes unknown
T2459 406-410 IN denotes with
T2458 391-398 VBN denotes defined
T2457 385-390 RB denotes newly
T2456 399-405 NN denotes domain
T2455 383-384 DT denotes a
T2454 378-379 -RRB- denotes )
T2453 365-367 : denotes :
T2452 363-365 NN denotes CD
T2451 367-378 NN denotes pfam01959.9
T2450 362-363 -LRB- denotes (
T2449 380-382 VBZ denotes is
T2448 356-361 NN denotes DUF21
T2447 355-428 sentence denotes DUF21 (CD: pfam01959.9) is a newly defined domain with unknown function.
T2446 354-355 . denotes .
T2445 353-354 -RRB- denotes ]
T2444 352-353 CD denotes 8
T2443 351-352 -LRB- denotes [
T2442 335-343 JJ denotes globular
T2441 328-334 JJ denotes stable
T2440 344-350 NN denotes domain
T2439 326-327 DT denotes a
T2438 321-325 VB denotes form
T2437 318-320 TO denotes to
T2436 301-308 NNS denotes domains
T2435 297-300 NN denotes CBS
T2434 294-296 IN denotes of
T2433 309-317 VBP denotes dimerise
T2432 288-293 NNS denotes Pairs
T2431 287-355 sentence denotes Pairs of CBS domains dimerise to form a stable globular domain [8].
T2430 286-287 . denotes .
T2429 279-286 NN denotes protein
T2428 277-278 DT denotes a
T2427 270-276 IN denotes within
T2426 258-262 CD denotes four
T2425 255-257 CC denotes or
T2424 263-269 NNS denotes copies
T2423 253-254 CD denotes 2
T2391 88-89 -RRB- denotes )
T2390 87-88 CD denotes 5
T2389 82-86 NN denotes Fig.
T2388 81-82 -LRB- denotes (
T2387 59-72 NN denotes transmembrane
T2386 50-58 JJ denotes distinct
T2385 73-80 NNS denotes domains
T2384 45-49 CD denotes four
T2383 24-28 NN denotes Acdp
T2382 18-23 NN denotes mouse
T2381 29-36 NNS denotes members
T2380 14-17 DT denotes all
T2379 37-44 VBP denotes contain
T2378 9-13 IN denotes that
T2377 3-8 VBD denotes found
T2376 0-2 PRP denotes We
T2375 0-183 sentence denotes We found that all mouse Acdp members contain four distinct transmembrane domains (Fig. 5), two CBS domains and a DUF21 domain that are found in bacteria CorC and yeast Amip3 proteins.
T2511 669-670 . denotes .
T2510 657-661 NN denotes Acdp
T2509 662-669 NNS denotes members
T2508 653-656 DT denotes all
T2507 650-652 IN denotes in
T2506 640-643 VBD denotes was
T2505 638-639 -RRB- denotes )
T2504 624-631 VBG denotes binding
T2503 623-624 HYPH denotes -
T2502 609-610 HYPH denotes -
T2501 599-609 NN denotes nucleotide
T2500 610-623 NN denotes monophosphate
T2499 592-598 JJ denotes cyclic
T2498 632-638 NN denotes domain
R1336 T2394 T2385 conj domains,domains
R1338 T2396 T2394 cc and,domains
R1339 T2397 T2398 det a,domain
R1340 T2398 T2394 conj domain,domains
R1341 T2399 T2398 compound DUF21,domain
R1342 T2400 T2401 dep that,found
R1343 T2401 T2385 relcl found,domains
R1344 T2402 T2401 auxpass are,found
R1345 T2403 T2401 prep in,found
R1346 T2404 T2405 nmod bacteria,CorC
R1347 T2405 T2406 nmod CorC,proteins
R1348 T2406 T2403 pobj proteins,in
R1349 T2407 T2405 cc and,CorC
R1350 T2408 T2409 compound yeast,Amip3
R1351 T2409 T2405 conj Amip3,CorC
R1352 T2410 T2377 punct .,found
R1353 T2412 T2413 compound CBS,domains
R1354 T2413 T2414 nsubj domains,are
R1355 T2415 T2416 amod small,modules
R1356 T2416 T2414 attr modules,are
R1357 T2417 T2416 amod intracellular,modules
R1358 T2418 T2419 dep that,found
R1359 T2419 T2416 relcl found,modules
R1360 T2420 T2419 auxpass are,found
R1361 T2421 T2419 advmod mostly,found
R1362 T2422 T2419 prep in,found
R1363 T2423 T2424 nummod 2,copies
R1364 T2424 T2422 pobj copies,in
R1365 T2425 T2423 cc or,2
R1366 T2426 T2423 conj four,2
R1367 T2427 T2419 prep within,found
R1368 T2428 T2429 det a,protein
R1369 T2429 T2427 pobj protein,within
R1370 T2430 T2414 punct .,are
R1371 T2432 T2433 nsubj Pairs,dimerise
R1372 T2434 T2432 prep of,Pairs
R1373 T2435 T2436 compound CBS,domains
R1374 T2436 T2434 pobj domains,of
R1375 T2437 T2438 aux to,form
R1376 T2438 T2433 advcl form,dimerise
R1377 T2439 T2440 det a,domain
R1378 T2440 T2438 dobj domain,form
R1379 T2441 T2440 amod stable,domain
R1380 T2442 T2440 amod globular,domain
R1381 T2443 T2444 punct [,8
R1382 T2444 T2433 parataxis 8,dimerise
R1383 T2445 T2444 punct ],8
R1384 T2446 T2433 punct .,dimerise
R1385 T2448 T2449 nsubj DUF21,is
R1386 T2450 T2451 punct (,pfam01959.9
R1387 T2451 T2448 parataxis pfam01959.9,DUF21
R1388 T2452 T2451 dep CD,pfam01959.9
R1389 T2453 T2451 punct : ,pfam01959.9
R1390 T2454 T2451 punct ),pfam01959.9
R1391 T2455 T2456 det a,domain
R1392 T2456 T2449 attr domain,is
R1393 T2457 T2458 advmod newly,defined
R1394 T2458 T2456 amod defined,domain
R1395 T2459 T2456 prep with,domain
R1396 T2460 T2461 amod unknown,function
R1397 T2461 T2459 pobj function,with
R1398 T2462 T2449 punct .,is
R1399 T2464 T2465 det This,domain
R1400 T2465 T2466 nsubj domain,is
R1401 T2467 T2468 det a,region
R1402 T2468 T2466 attr region,is
R1403 T2469 T2468 amod transmembrane,region
R1404 T2470 T2468 cc and,region
R1405 T2471 T2468 conj found,region
R1406 T2472 T2473 aux to,located
R1407 T2473 T2471 xcomp located,found
R1408 T2474 T2473 auxpass be,located
R1409 T2475 T2473 prep in,located
R1410 T2476 T2477 det the,terminus
R1411 T2477 T2475 pobj terminus,in
R1412 T2478 T2477 compound N,terminus
R1413 T2479 T2477 punct -,terminus
R1414 T2480 T2477 prep of,terminus
R1415 T2481 T2482 det the,proteins
R1416 T2482 T2480 pobj proteins,of
R1417 T2483 T2482 amod adjacent,proteins
R1319 T2376 T2377 nsubj We,found
R1320 T2378 T2379 mark that,contain
R1321 T2379 T2377 ccomp contain,found
R1322 T2380 T2381 det all,members
R1323 T2381 T2379 nsubj members,contain
R1324 T2382 T2381 compound mouse,members
R1325 T2383 T2381 compound Acdp,members
R1326 T2384 T2385 nummod four,domains
R1327 T2385 T2379 dobj domains,contain
R1328 T2386 T2385 amod distinct,domains
R1329 T2387 T2385 compound transmembrane,domains
R1330 T2388 T2389 punct (,Fig.
R1331 T2389 T2385 parataxis Fig.,domains
R1332 T2390 T2389 nummod 5,Fig.
R1333 T2391 T2389 punct ),Fig.
R1334 T2392 T2385 punct ", ",domains
R1335 T2393 T2394 nummod two,domains
R1337 T2395 T2394 compound CBS,domains
R1418 T2484 T2483 prep to,adjacent
R1419 T2485 T2486 nummod two,domains
R1420 T2486 T2484 pobj domains,to
R1421 T2487 T2486 amod intracellular,domains
R1422 T2488 T2486 compound CBS,domains
R1423 T2489 T2466 punct .,is
R1424 T2491 T2492 det A,domain
R1425 T2492 T2496 nsubjpass domain,found
R1426 T2493 T2494 npadvmod cNMP,binding
R1427 T2494 T2492 amod binding,domain
R1428 T2495 T2494 punct -,binding
R1429 T2497 T2498 punct (,domain
R1430 T2498 T2492 parataxis domain,domain
R1431 T2499 T2500 amod cyclic,monophosphate
R1432 T2500 T2498 nmod monophosphate,domain
R1433 T2501 T2500 nmod nucleotide,monophosphate
R1434 T2502 T2500 punct -,monophosphate
R1435 T2503 T2500 punct -,monophosphate
R1436 T2504 T2500 amod binding,monophosphate
R1437 T2505 T2498 punct ),domain
R1438 T2506 T2496 auxpass was,found
R1439 T2507 T2496 prep in,found
R1440 T2508 T2509 det all,members
R1441 T2509 T2507 pobj members,in
R1442 T2510 T2509 compound Acdp,members
R1443 T2511 T2496 punct .,found

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1872 632-638 SO:0000417 denotes domain
T1871 584-590 SO:0000417 denotes domain
T1870 559-566 SO:0000417 denotes domains
T1869 541-554 GO:0005622 denotes intracellular
T1868 451-459 GO:0016020 denotes membrane
T1867 446-466 SO:0001077 denotes transmembrane region
T1866 434-440 SO:0000417 denotes domain
T1865 399-405 SO:0000417 denotes domain
T1864 344-350 SO:0000417 denotes domain
T1863 309-317 GO:0046983 denotes dimerise
T1862 301-308 SO:0000417 denotes domains
T1861 220-227 SO:0000417 denotes modules
T1860 206-219 GO:0005622 denotes intracellular
T1859 188-195 SO:0000417 denotes domains
T1858 153-157 PR:000022321 denotes CorC
T1857 144-152 NCBITaxon:2 denotes bacteria
T1856 119-125 SO:0000417 denotes domain
T1855 99-106 SO:0000417 denotes domains
T1854 73-80 SO:0000417 denotes domains
T1853 64-72 GO:0016020 denotes membrane
T1852 18-23 NCBITaxon:10088 denotes mouse

2_test

Id Subject Object Predicate Lexical cue
14723793-9020585-10642189 352-353 9020585 denotes 8

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2005 657-661 PR_EXT:ACDP_or_CNNM denotes Acdp
T2004 632-638 SO_EXT:0000417 denotes domain
T2003 624-631 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T2002 584-590 SO_EXT:0000417 denotes domain
T2001 576-583 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T2000 559-566 SO_EXT:0000417 denotes domains
T1999 546-554 CL_GO_EXT:cell denotes cellular
T1998 541-554 GO:0005622 denotes intracellular
T1997 516-524 CHEBI_PR_EXT:protein denotes proteins
T1996 498-508 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminus
T1995 451-459 GO:0016020 denotes membrane
T1994 446-466 SO_EXT:0001077 denotes transmembrane region
T1989 301-308 SO_EXT:0000417 denotes domains
T1993 434-440 SO_EXT:0000417 denotes domain
T1992 399-405 SO_EXT:0000417 denotes domain
T1991 344-350 SO_EXT:0000417 denotes domain
T1990 309-317 GO:0046983 denotes dimerise
T1988 279-286 CHEBI_PR_EXT:protein denotes protein
T1987 263-269 SO_EXT:sequence_copy_entity denotes copies
T1986 220-227 SO_EXT:0000417 denotes modules
T1985 211-219 CL_GO_EXT:cell denotes cellular
T1984 206-219 GO:0005622 denotes intracellular
T1983 188-195 SO_EXT:0000417 denotes domains
T1982 174-182 CHEBI_PR_EXT:protein denotes proteins
T1981 162-167 NCBITaxon_EXT:yeast denotes yeast
T1980 153-157 PR_EXT:000022321 denotes CorC
T1979 144-152 NCBITaxon:2 denotes bacteria
T1978 119-125 SO_EXT:0000417 denotes domain
T1977 99-106 SO_EXT:0000417 denotes domains
T1976 73-80 SO_EXT:0000417 denotes domains
T1975 64-72 GO:0016020 denotes membrane
T1974 24-28 PR_EXT:ACDP_or_CNNM denotes Acdp
T1973 18-23 NCBITaxon:10088 denotes mouse