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PMC:3359311 / 1504-1954 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T375 108-113 P01584 denotes IL-1β
T376 198-203 P01584 denotes IL-1β
T377 338-343 P01584 denotes IL-1β

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Speculation
T63 83-90 Positive_regulation denotes induced
T64 108-113 Protein denotes IL-1β
T65 160-169 Positive_regulation denotes preserved
T66 198-203 Protein denotes IL-1β
T67 204-213 Localization denotes secretion
T68 328-337 Positive_regulation denotes increased
T69 337-343 Protein denotes IL-1β
T70 344-354 Gene_expression denotes production
T71 373-376 Positive_regulation denotes due true
R39 T64 T63 themeOf IL-1β,induced
R40 T66 T67 themeOf IL-1β,secretion
R41 T67 T65 themeOf secretion,preserved
R42 T68 T71 themeOf increased,due
R43 T69 T70 themeOf IL-1β,production
R44 T70 T68 themeOf production,increased

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T836 108-113 Protein denotes IL-1β
T837 198-203 Protein denotes IL-1β
T838 239-273 Protein denotes CF pathogen Pseudomonas aeruginosa
T839 204-213 Localization denotes secretion
T840 204-213 Localization denotes secretion
T841 338-343 Protein denotes IL-1β
T842 405-410 Protein denotes NF-κB
T843 436-440 Protein denotes CFTR
T844 344-354 Gene_expression denotes production
T845 373-376 Positive_regulation denotes due
T846 393-401 Positive_regulation denotes increase
T847 428-432 Negative_regulation denotes loss
T848 328-337 Positive_regulation denotes increased
R686 T837 T839 themeOf IL-1β,secretion
R687 T838 T840 themeOf CF pathogen Pseudomonas aeruginosa,secretion
R688 T841 T844 themeOf IL-1β,production
R689 T842 T846 themeOf NF-κB,increase
R690 T843 T847 themeOf CFTR,loss
R691 T844 T845 themeOf production,due
R692 T844 T848 themeOf production,increased

events-check-again

Id Subject Object Predicate Lexical cue Speculation
T793 83-90 Positive_regulation denotes induced
T794 108-113 Protein denotes IL-1β
T795 160-169 Positive_regulation denotes preserved
T796 198-203 Protein denotes IL-1β
T797 204-213 Localization denotes secretion
T798 328-337 Positive_regulation denotes increased
T799 337-343 Protein denotes IL-1β
T800 344-354 Gene_expression denotes production
T801 373-376 Positive_regulation denotes due true
R661 T794 T793 themeOf IL-1β,induced
R662 T796 T797 themeOf IL-1β,secretion
R663 T797 T795 themeOf secretion,preserved
R664 T798 T801 themeOf increased,due
R665 T799 T800 themeOf IL-1β,production
R666 T800 T798 themeOf production,increased

GO-CC

Id Subject Object Predicate Lexical cue
T693 25-30 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T685 204-213 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T595 0-10 NNP denotes Conclusion
T596 11-24 NNP denotes Hematopoeitic
T597 25-30 NNS denotes cells
T598 31-37 VBP denotes appear
T599 38-40 TO denotes to
T600 41-43 VB denotes be
T601 44-47 DT denotes the
T602 48-59 JJ denotes predominant
T603 60-66 NN denotes source
T604 67-69 IN denotes of
T605 70-90 JJ denotes inflammasome-induced
T606 91-107 JJ denotes pro-inflammatory
T607 108-113 NN denotes IL-1β
T608 114-116 IN denotes in
T609 117-120 NNP denotes CF.
T610 121-126 NNP denotes PBMCs
T611 127-134 VBD denotes derived
T612 135-139 IN denotes from
T613 140-142 NNP denotes CF
T614 143-151 NNS denotes subjects
T615 152-159 VBP denotes display
T616 160-169 VBN denotes preserved
T617 170-182 JJ denotes inflammasome
T618 183-193 NN denotes activation
T619 194-197 CC denotes and
T620 198-203 JJ denotes IL-1β
T621 204-213 NN denotes secretion
T622 214-216 IN denotes in
T623 217-225 NN denotes response
T624 226-228 TO denotes to
T625 229-232 DT denotes the
T626 233-238 JJ denotes major
T627 239-241 NNP denotes CF
T628 242-250 NN denotes pathogen
T629 251-262 NNP denotes Pseudomonas
T630 263-273 NN denotes aeruginosa
T631 273-274 . denotes .
T632 275-282 RB denotes However
T633 282-283 , denotes ,
T634 284-287 PRP$ denotes our
T635 288-292 NNS denotes data
T636 293-295 VBP denotes do
T637 296-299 RB denotes not
T638 300-307 VB denotes support
T639 308-311 DT denotes the
T640 312-322 NN denotes hypothesis
T641 323-327 WDT denotes that
T642 328-337 VBD denotes increased
T643 338-343 JJ denotes IL-1β
T644 344-354 NN denotes production
T645 355-357 IN denotes in
T646 358-360 NNP denotes CF
T647 361-369 NNS denotes subjects
T648 370-372 VBZ denotes is
T649 373-376 JJ denotes due
T650 377-379 TO denotes to
T651 380-382 DT denotes an
T652 383-392 JJ denotes intrinsic
T653 393-401 NN denotes increase
T654 402-404 IN denotes in
T655 405-410 JJ denotes NF-κB
T656 411-419 NN denotes activity
T657 420-427 IN denotes through
T658 428-432 NN denotes loss
T659 433-435 IN denotes of
T660 436-440 NNP denotes CFTR
T661 441-449 NN denotes function
T662 449-450 . denotes .
R533 T595 T596 compound Conclusion,Hematopoeitic
R534 T596 T597 compound Hematopoeitic,cells
R535 T597 T598 nsubj cells,appear
R536 T598 T598 ROOT appear,appear
R537 T599 T600 aux to,be
R538 T600 T598 xcomp be,appear
R539 T601 T603 det the,source
R540 T602 T603 amod predominant,source
R541 T603 T600 attr source,be
R542 T604 T603 prep of,source
R543 T605 T607 amod inflammasome-induced,IL-1β
R544 T606 T607 amod pro-inflammatory,IL-1β
R545 T607 T604 pobj IL-1β,of
R546 T608 T607 prep in,IL-1β
R547 T609 T610 compound CF.,PBMCs
R548 T610 T608 pobj PBMCs,in
R549 T611 T598 advcl derived,appear
R550 T612 T611 prep from,derived
R551 T613 T614 compound CF,subjects
R552 T614 T612 pobj subjects,from
R553 T615 T611 dobj display,derived
R554 T616 T618 amod preserved,activation
R555 T617 T618 amod inflammasome,activation
R556 T618 T615 dobj activation,display
R557 T619 T618 cc and,activation
R558 T620 T621 amod IL-1β,secretion
R559 T621 T618 conj secretion,activation
R560 T622 T615 prep in,display
R561 T623 T622 pobj response,in
R562 T624 T623 prep to,response
R563 T625 T628 det the,pathogen
R564 T626 T628 amod major,pathogen
R565 T627 T628 compound CF,pathogen
R566 T628 T624 pobj pathogen,to
R567 T629 T630 compound Pseudomonas,aeruginosa
R568 T630 T628 appos aeruginosa,pathogen
R569 T631 T598 punct .,appear
R570 T632 T638 advmod However,support
R571 T633 T638 punct ",",support
R572 T634 T635 poss our,data
R573 T635 T638 nsubj data,support
R574 T636 T638 aux do,support
R575 T637 T638 neg not,support
R576 T638 T638 ROOT support,support
R577 T639 T640 det the,hypothesis
R578 T640 T638 dobj hypothesis,support
R579 T641 T642 nsubj that,increased
R580 T642 T640 relcl increased,hypothesis
R581 T643 T644 amod IL-1β,production
R582 T644 T642 dobj production,increased
R583 T645 T644 prep in,production
R584 T646 T647 compound CF,subjects
R585 T647 T645 pobj subjects,in
R586 T648 T638 advcl is,support
R587 T649 T648 acomp due,is
R588 T650 T649 prep to,due
R589 T651 T653 det an,increase
R590 T652 T653 amod intrinsic,increase
R591 T653 T650 pobj increase,to
R592 T654 T653 prep in,increase
R593 T655 T656 amod NF-κB,activity
R594 T656 T654 pobj activity,in
R595 T657 T653 prep through,increase
R596 T658 T657 pobj loss,through
R597 T659 T658 prep of,loss
R598 T660 T661 amod CFTR,function
R599 T661 T659 pobj function,of
R600 T662 T638 punct .,support

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T297 0-10 NN denotes Conclusion
T298 11-24 JJ denotes Hematopoeitic
T299 25-30 NN denotes cells
T300 31-37 VB denotes appear
T301 38-40 TO denotes to
T302 41-43 VB denotes be
T303 44-47 DT denotes the
T304 48-59 JJ denotes predominant
T305 60-66 NN denotes source
T306 67-69 IN denotes of
T307 70-90 JJ denotes inflammasome-induced
T308 91-107 JJ denotes pro-inflammatory
T309 108-113 NN denotes IL-1β
T310 114-116 IN denotes in
T311 117-119 NN denotes CF
T312 121-126 NN denotes PBMCs
T313 127-134 VB denotes derived
T314 135-139 IN denotes from
T315 140-142 NN denotes CF
T316 143-151 NN denotes subjects
T317 152-159 VB denotes display
T318 160-169 VB denotes preserved
T319 170-182 JJ denotes inflammasome
T320 183-193 NN denotes activation
T321 194-197 CC denotes and
T322 198-203 NN denotes IL-1β
T323 204-213 NN denotes secretion
T324 214-216 IN denotes in
T325 217-225 NN denotes response
T326 226-228 TO denotes to
T327 229-232 DT denotes the
T328 233-238 JJ denotes major
T329 239-241 NN denotes CF
T330 242-250 NN denotes pathogen
T331 251-262 NN denotes Pseudomonas
T332 263-273 NN denotes aeruginosa
T333 275-282 RB denotes However
T334 282-283 -COMMA- denotes ,
T335 284-287 PRP-DOLLAR- denotes our
T336 288-292 NN denotes data
T337 293-295 VB denotes do
T338 296-299 RB denotes not
T339 300-307 VB denotes support
T340 308-311 DT denotes the
T341 312-322 NN denotes hypothesis
T342 323-327 IN denotes that
T343 328-337 VB denotes increased
T344 338-343 NN denotes IL-1β
T345 344-354 NN denotes production
T346 355-357 IN denotes in
T347 358-360 NN denotes CF
T348 361-369 NN denotes subjects
T349 370-372 VB denotes is
T350 373-376 JJ denotes due
T351 377-379 TO denotes to
T352 380-382 DT denotes an
T353 383-392 JJ denotes intrinsic
T354 393-401 NN denotes increase
T355 402-404 IN denotes in
T356 405-410 NN denotes NF-κB
T357 411-419 NN denotes activity
T358 420-427 IN denotes through
T359 428-432 NN denotes loss
T360 433-435 IN denotes of
T361 436-440 NN denotes CFTR
T362 441-449 NN denotes function
R251 T299 T298 arg1Of cells,Hematopoeitic
R252 T299 T300 arg1Of cells,appear
R253 T299 T302 arg1Of cells,be
R254 T302 T300 arg2Of be,appear
R255 T302 T301 arg1Of be,to
R256 T305 T302 arg2Of source,be
R257 T305 T303 arg1Of source,the
R258 T305 T304 arg1Of source,predominant
R259 T305 T306 arg1Of source,of
R260 T305 T310 arg1Of source,in
R261 T309 T306 arg2Of IL-1β,of
R262 T309 T307 arg1Of IL-1β,inflammasome-induced
R263 T309 T308 arg1Of IL-1β,pro-inflammatory
R264 T311 T310 arg2Of CF,in
R265 T312 T313 arg2Of PBMCs,derived
R266 T312 T317 arg1Of PBMCs,display
R267 T313 T314 arg1Of derived,from
R268 T316 T314 arg2Of subjects,from
R269 T316 T315 arg1Of subjects,CF
R270 T317 T324 arg1Of display,in
R271 T320 T318 arg2Of activation,preserved
R272 T320 T319 arg1Of activation,inflammasome
R273 T320 T321 arg1Of activation,and
R274 T321 T317 arg2Of and,display
R275 T323 T321 arg2Of secretion,and
R276 T323 T322 arg1Of secretion,IL-1β
R277 T324 T326 arg1Of in,to
R278 T325 T324 arg2Of response,in
R279 T332 T324 arg3Of aeruginosa,in
R280 T332 T327 arg1Of aeruginosa,the
R281 T332 T328 arg1Of aeruginosa,major
R282 T332 T329 arg1Of aeruginosa,CF
R283 T332 T330 arg1Of aeruginosa,pathogen
R284 T332 T331 arg1Of aeruginosa,Pseudomonas
R285 T336 T335 arg1Of data,our
R286 T336 T337 arg1Of data,do
R287 T336 T339 arg1Of data,support
R288 T339 T333 arg1Of support,However
R289 T339 T334 arg1Of support,","
R290 T339 T337 arg2Of support,do
R291 T339 T338 arg1Of support,not
R292 T341 T339 arg2Of hypothesis,support
R293 T341 T340 arg1Of hypothesis,the
R294 T345 T343 arg2Of production,increased
R295 T345 T344 arg1Of production,IL-1β
R296 T345 T346 arg1Of production,in
R297 T345 T349 arg1Of production,is
R298 T345 T351 arg1Of production,to
R299 T348 T346 arg2Of subjects,in
R300 T348 T347 arg1Of subjects,CF
R301 T349 T341 arg2Of is,hypothesis
R302 T349 T342 arg1Of is,that
R303 T351 T349 arg2Of to,is
R304 T351 T350 arg1Of to,due
R305 T354 T351 arg2Of increase,to
R306 T354 T352 arg1Of increase,an
R307 T354 T353 arg1Of increase,intrinsic
R308 T354 T355 arg1Of increase,in
R309 T357 T355 arg2Of activity,in
R310 T357 T356 arg1Of activity,NF-κB
R311 T357 T358 arg1Of activity,through
R312 T359 T358 arg2Of loss,through
R313 T359 T360 arg1Of loss,of
R314 T362 T360 arg2Of function,of
R315 T362 T361 arg1Of function,CFTR

sentences

Id Subject Object Predicate Lexical cue
T85 0-10 Sentence denotes Conclusion
T86 11-120 Sentence denotes Hematopoeitic cells appear to be the predominant source of inflammasome-induced pro-inflammatory IL-1β in CF.
T87 121-274 Sentence denotes PBMCs derived from CF subjects display preserved inflammasome activation and IL-1β secretion in response to the major CF pathogen Pseudomonas aeruginosa.
T88 275-450 Sentence denotes However, our data do not support the hypothesis that increased IL-1β production in CF subjects is due to an intrinsic increase in NF-κB activity through loss of CFTR function.
T15 0-10 Sentence denotes Conclusion
T16 11-120 Sentence denotes Hematopoeitic cells appear to be the predominant source of inflammasome-induced pro-inflammatory IL-1β in CF.
T17 121-274 Sentence denotes PBMCs derived from CF subjects display preserved inflammasome activation and IL-1β secretion in response to the major CF pathogen Pseudomonas aeruginosa.
T18 275-450 Sentence denotes However, our data do not support the hypothesis that increased IL-1β production in CF subjects is due to an intrinsic increase in NF-κB activity through loss of CFTR function.