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PMC:3342329 / 650-842 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T98 149-164 Phosphorylation denotes phosphorylation
T97 135-145 Negative_regulation denotes inhibition
T96 115-122 Entity denotes nucleus
T95 102-105 Protein denotes p65
T94 94-97 Protein denotes p50
T93 77-90 Localization denotes translocation
T69 102-105 Protein denotes p65
T68 94-97 Protein denotes p50
R19 T94 T93 themeOf p50,translocation
R20 T95 T93 themeOf p65,translocation
R21 T96 T93 locationOf nucleus,translocation
R22 T98 T97 themeOf phosphorylation,inhibition

testone

Id Subject Object Predicate Lexical cue
T33 102-105 Protein denotes p65
T32 94-97 Protein denotes p50
T52 149-164 Phosphorylation denotes phosphorylation
T51 115-122 Entity denotes nucleus
T50 77-90 Localization denotes translocation
T49 46-53 Binding denotes binding
T48 28-38 Negative_regulation denotes inhibition
R5 T32 T50 themeOf p50,translocation
R6 T33 T50 themeOf p65,translocation
R11 T49 T48 themeOf binding,inhibition
R12 T51 T50 locationOf nucleus,translocation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T641 77-90 Localization denotes translocation
T625 102-105 Protein denotes p65
T624 94-97 Protein denotes p50
R342 T624 T641 themeOf p50,translocation
R343 T625 T641 themeOf p65,translocation

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T767 77-90 Localization denotes translocation
T751 102-105 Protein denotes p65
T750 94-97 Protein denotes p50
R411 T750 T767 themeOf p50,translocation
R412 T751 T767 themeOf p65,translocation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T389 185-188 DT denotes the
T388 182-184 IN denotes in
T387 176-181 VB denotes found
T386 172-175 VB denotes was
T385 168-171 NN denotes IκB
T384 165-167 IN denotes of
T383 149-164 NN denotes phosphorylation
T382 146-148 IN denotes of
T381 135-145 NN denotes inhibition
T380 131-134 DT denotes the
T379 123-130 IN denotes through
T378 115-122 NN denotes nucleus
T377 111-114 DT denotes the
T376 106-110 IN denotes into
T375 102-105 NN denotes p65
T374 98-101 CC denotes and
T373 94-97 NN denotes p50
T372 91-93 IN denotes of
T371 77-90 NN denotes translocation
T370 73-76 CC denotes and
T369 71-72 -COMMA- denotes ,
T368 66-71 NN denotes NF-κB
T367 63-65 IN denotes of
T366 54-62 NN denotes activity
T365 46-53 NN denotes binding
T364 42-45 NN denotes DNA
T363 39-41 IN denotes of
T362 28-38 NN denotes inhibition
T361 16-27 JJ denotes Significant
T360 8-14 NN denotes growth
T359 2-7 NN denotes tumor
R141 T360 T359 arg1Of growth,tumor
R142 T362 T361 arg1Of inhibition,Significant
R143 T362 T363 arg1Of inhibition,of
R144 T362 T370 arg1Of inhibition,and
R145 T366 T363 arg2Of activity,of
R146 T366 T364 arg1Of activity,DNA
R147 T366 T365 arg1Of activity,binding
R148 T366 T367 arg1Of activity,of
R149 T368 T367 arg2Of NF-κB,of
R150 T370 T369 arg1Of and,","
R151 T370 T379 arg1Of and,through
R152 T370 T386 arg1Of and,was
R153 T370 T387 arg2Of and,found
R154 T371 T370 arg2Of translocation,and
R155 T371 T372 arg1Of translocation,of
R156 T371 T376 arg1Of translocation,into
R157 T373 T374 arg1Of p50,and
R158 T374 T372 arg2Of and,of
R159 T375 T374 arg2Of p65,and
R160 T378 T376 arg2Of nucleus,into
R161 T378 T377 arg1Of nucleus,the
R162 T381 T379 arg2Of inhibition,through
R163 T381 T380 arg1Of inhibition,the
R164 T381 T382 arg1Of inhibition,of
R165 T383 T382 arg2Of phosphorylation,of
R166 T383 T384 arg1Of phosphorylation,of
R167 T385 T384 arg2Of IκB,of
R168 T387 T386 arg2Of found,was
R169 T387 T388 arg1Of found,in

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T175 102-105 Protein denotes p65
T174 94-97 Protein denotes p50

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T550 102-105 http://www.uniprot.org/uniprot/P21579 denotes p65
T549 102-105 http://www.uniprot.org/uniprot/Q04206 denotes p65
T548 94-97 http://www.uniprot.org/uniprot/P19838 denotes p50

GO-BP

Id Subject Object Predicate Lexical cue
T207 149-171 http://purl.obolibrary.org/obo/GO_0007252 denotes phosphorylation of IκB
T206 149-164 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T205 135-171 http://purl.obolibrary.org/obo/GO_1903720 denotes inhibition of phosphorylation of IκB
T204 135-164 http://purl.obolibrary.org/obo/GO_0042326 denotes inhibition of phosphorylation
T203 28-53 http://purl.obolibrary.org/obo/GO_0039568 denotes inhibition of DNA binding
T202 28-53 http://purl.obolibrary.org/obo/GO_1904743 denotes inhibition of DNA binding
T201 28-53 http://purl.obolibrary.org/obo/GO_0043392 denotes inhibition of DNA binding
T190 8-14 http://purl.obolibrary.org/obo/GO_0040007 denotes growth

GO-MF

Id Subject Object Predicate Lexical cue
T214 42-53 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T215 46-53 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T213 115-122 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

simple1

Id Subject Object Predicate Lexical cue
T248 102-105 Protein denotes p65
T247 94-97 Protein denotes p50

DLUT931

Id Subject Object Predicate Lexical cue
T581 135-145 Negative_regulation denotes inhibition
T580 77-90 Localization denotes translocation
T565 102-105 Protein denotes p65
T564 94-97 Protein denotes p50
R318 T564 T580 themeOf p50,translocation
R319 T565 T580 themeOf p65,translocation
R324 T580 T581 themeOf translocation,inhibition
R325 T580 T581 themeOf translocation,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T791 102-105 Protein denotes p65
T780 111-122 Entity denotes the nucleus
T777 63-71 Protein denotes of NF-κB
T775 94-97 Protein denotes p50

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T966 185-188 DT denotes the
T965 182-184 IN denotes in
T964 176-181 VBN denotes found
T963 172-175 VBD denotes was
T962 168-171 NNP denotes IκB
T961 165-167 IN denotes of
T960 149-164 NN denotes phosphorylation
T959 146-148 IN denotes of
T958 135-145 NN denotes inhibition
T957 131-134 DT denotes the
T956 123-130 IN denotes through
T955 115-122 NN denotes nucleus
T954 111-114 DT denotes the
T953 106-110 IN denotes into
T952 102-105 CD denotes p65
T951 98-101 CC denotes and
T950 94-97 CD denotes p50
T949 91-93 IN denotes of
T948 77-90 NN denotes translocation
T947 73-76 CC denotes and
T946 71-72 , denotes ,
T945 66-71 NNP denotes NF-κB
T944 63-65 IN denotes of
T943 54-62 NN denotes activity
T942 46-53 JJ denotes binding
T941 42-45 NNP denotes DNA
T940 39-41 IN denotes of
T939 28-38 NN denotes inhibition
T938 16-27 JJ denotes Significant
T937 14-15 . denotes .
T936 8-14 NN denotes growth
T935 2-7 NN denotes tumor
R540 T935 T936 compound tumor,growth
R543 T938 T939 amod Significant,inhibition
R544 T939 T964 nsubjpass inhibition,found
R545 T940 T939 prep of,inhibition
R546 T941 T940 pobj DNA,of
R547 T942 T943 amod binding,activity
R548 T943 T939 conj activity,inhibition
R549 T944 T943 prep of,activity
R550 T945 T944 pobj NF-κB,of
R551 T946 T943 punct ",",activity
R552 T947 T943 cc and,activity
R553 T948 T943 conj translocation,activity
R554 T949 T948 prep of,translocation
R555 T950 T949 pobj p50,of
R556 T951 T950 cc and,p50
R557 T952 T950 conj p65,p50
R558 T953 T939 prep into,inhibition
R559 T954 T955 det the,nucleus
R560 T955 T953 pobj nucleus,into
R561 T956 T939 prep through,inhibition
R562 T957 T958 det the,inhibition
R563 T958 T956 pobj inhibition,through
R564 T959 T958 prep of,inhibition
R565 T960 T959 pobj phosphorylation,of
R566 T961 T960 prep of,phosphorylation
R567 T962 T961 pobj IκB,of
R568 T963 T964 auxpass was,found
R569 T964 T964 ROOT found,found
R570 T965 T964 prep in,found

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T670 28-38 Negative_regulation denotes inhibition
T669 28-38 Negative_regulation denotes inhibition
T668 135-145 Negative_regulation denotes inhibition
T667 135-145 Negative_regulation denotes inhibition
T666 135-145 Negative_regulation denotes inhibition
T665 77-90 Localization denotes translocation
T664 77-90 Localization denotes translocation
T663 28-38 Negative_regulation denotes inhibition
T662 149-164 Phosphorylation denotes phosphorylation
T661 115-122 Entity denotes nucleus
T660 46-53 Binding denotes binding
T659 168-171 Protein denotes IκB
T658 102-105 Protein denotes p65
T657 94-97 Protein denotes p50
T656 66-71 Protein denotes NF-κB
R352 T656 T660 themeOf NF-κB,binding
R353 T657 T664 themeOf p50,translocation
R354 T658 T665 themeOf p65,translocation
R355 T659 T662 themeOf IκB,phosphorylation
R356 T660 T663 themeOf binding,inhibition
R357 T661 T664 locationOf nucleus,translocation
R358 T661 T665 locationOf nucleus,translocation
R359 T662 T668 themeOf phosphorylation,inhibition
R360 T664 T666 themeOf translocation,inhibition
R361 T664 T669 themeOf translocation,inhibition
R362 T665 T667 themeOf translocation,inhibition
R363 T665 T670 themeOf translocation,inhibition