PMC:3342329 / 614-1050 JSONTXT

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    test3

    {"project":"test3","denotations":[{"id":"T99","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T100","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T98","span":{"begin":185,"end":200},"obj":"Phosphorylation"},{"id":"T97","span":{"begin":171,"end":181},"obj":"Negative_regulation"},{"id":"T96","span":{"begin":151,"end":158},"obj":"Entity"},{"id":"T95","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T94","span":{"begin":130,"end":133},"obj":"Protein"},{"id":"T93","span":{"begin":113,"end":126},"obj":"Localization"},{"id":"T71","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T70","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T69","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T68","span":{"begin":130,"end":133},"obj":"Protein"}],"relations":[{"id":"R19","pred":"themeOf","subj":"T94","obj":"T93"},{"id":"R20","pred":"themeOf","subj":"T95","obj":"T93"},{"id":"R21","pred":"locationOf","subj":"T96","obj":"T93"},{"id":"R22","pred":"themeOf","subj":"T98","obj":"T97"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    testone

    {"project":"testone","denotations":[{"id":"T35","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T34","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T33","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T32","span":{"begin":130,"end":133},"obj":"Protein"},{"id":"T53","span":{"begin":355,"end":362},"obj":"Phosphorylation"},{"id":"T52","span":{"begin":185,"end":200},"obj":"Phosphorylation"},{"id":"T51","span":{"begin":151,"end":158},"obj":"Entity"},{"id":"T50","span":{"begin":113,"end":126},"obj":"Localization"},{"id":"T49","span":{"begin":82,"end":89},"obj":"Binding"},{"id":"T48","span":{"begin":64,"end":74},"obj":"Negative_regulation"}],"relations":[{"id":"R5","pred":"themeOf","subj":"T32","obj":"T50"},{"id":"R6","pred":"themeOf","subj":"T33","obj":"T50"},{"id":"R11","pred":"themeOf","subj":"T49","obj":"T48"},{"id":"R12","pred":"locationOf","subj":"T51","obj":"T50"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T641","span":{"begin":113,"end":126},"obj":"Localization"},{"id":"T627","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T626","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T625","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T624","span":{"begin":130,"end":133},"obj":"Protein"}],"relations":[{"id":"R342","pred":"themeOf","subj":"T624","obj":"T641"},{"id":"R343","pred":"themeOf","subj":"T625","obj":"T641"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T767","span":{"begin":113,"end":126},"obj":"Localization"},{"id":"T753","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T752","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T751","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T750","span":{"begin":130,"end":133},"obj":"Protein"}],"relations":[{"id":"R411","pred":"themeOf","subj":"T750","obj":"T767"},{"id":"R412","pred":"themeOf","subj":"T751","obj":"T767"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T424","span":{"begin":423,"end":431},"obj":"NN"},{"id":"T423","span":{"begin":419,"end":422},"obj":"DT"},{"id":"T422","span":{"begin":411,"end":418},"obj":"IN"},{"id":"T421","span":{"begin":409,"end":410},"obj":"-COMMA-"},{"id":"T420","span":{"begin":401,"end":409},"obj":"VB"},{"id":"T419","span":{"begin":397,"end":400},"obj":"VB"},{"id":"T418","span":{"begin":395,"end":396},"obj":"-COMMA-"},{"id":"T417","span":{"begin":392,"end":395},"obj":"NN"},{"id":"T416","span":{"begin":388,"end":391},"obj":"CC"},{"id":"T415","span":{"begin":386,"end":387},"obj":"-COMMA-"},{"id":"T414","span":{"begin":382,"end":386},"obj":"NN"},{"id":"T413","span":{"begin":374,"end":381},"obj":"VB"},{"id":"T412","span":{"begin":372,"end":373},"obj":"-COMMA-"},{"id":"T411","span":{"begin":363,"end":372},"obj":"NN"},{"id":"T410","span":{"begin":355,"end":362},"obj":"VB"},{"id":"T409","span":{"begin":352,"end":354},"obj":"IN"},{"id":"T408","span":{"begin":347,"end":351},"obj":"JJ"},{"id":"T407","span":{"begin":345,"end":346},"obj":"-COMMA-"},{"id":"T406","span":{"begin":335,"end":345},"obj":"NN"},{"id":"T405","span":{"begin":327,"end":334},"obj":"NN"},{"id":"T404","span":{"begin":317,"end":326},"obj":"JJ"},{"id":"T403","span":{"begin":310,"end":316},"obj":"NN"},{"id":"T402","span":{"begin":304,"end":309},"obj":"NN"},{"id":"T401","span":{"begin":298,"end":302},"obj":"NN"},{"id":"T400","span":{"begin":290,"end":297},"obj":"JJ"},{"id":"T399","span":{"begin":287,"end":289},"obj":"IN"},{"id":"T398","span":{"begin":279,"end":286},"obj":"NN"},{"id":"T397","span":{"begin":270,"end":278},"obj":"NN"},{"id":"T396","span":{"begin":267,"end":269},"obj":"TO"},{"id":"T395","span":{"begin":258,"end":266},"obj":"VB"},{"id":"T394","span":{"begin":253,"end":257},"obj":"NN"},{"id":"T393","span":{"begin":245,"end":252},"obj":"NN"},{"id":"T392","span":{"begin":242,"end":244},"obj":"IN"},{"id":"T391","span":{"begin":234,"end":241},"obj":"NN"},{"id":"T390","span":{"begin":225,"end":233},"obj":"NN"},{"id":"T389","span":{"begin":221,"end":224},"obj":"DT"},{"id":"T388","span":{"begin":218,"end":220},"obj":"IN"},{"id":"T387","span":{"begin":212,"end":217},"obj":"VB"},{"id":"T386","span":{"begin":208,"end":211},"obj":"VB"},{"id":"T385","span":{"begin":204,"end":207},"obj":"NN"},{"id":"T384","span":{"begin":201,"end":203},"obj":"IN"},{"id":"T383","span":{"begin":185,"end":200},"obj":"NN"},{"id":"T382","span":{"begin":182,"end":184},"obj":"IN"},{"id":"T381","span":{"begin":171,"end":181},"obj":"NN"},{"id":"T380","span":{"begin":167,"end":170},"obj":"DT"},{"id":"T379","span":{"begin":159,"end":166},"obj":"IN"},{"id":"T378","span":{"begin":151,"end":158},"obj":"NN"},{"id":"T377","span":{"begin":147,"end":150},"obj":"DT"},{"id":"T376","span":{"begin":142,"end":146},"obj":"IN"},{"id":"T375","span":{"begin":138,"end":141},"obj":"NN"},{"id":"T374","span":{"begin":134,"end":137},"obj":"CC"},{"id":"T373","span":{"begin":130,"end":133},"obj":"NN"},{"id":"T372","span":{"begin":127,"end":129},"obj":"IN"},{"id":"T371","span":{"begin":113,"end":126},"obj":"NN"},{"id":"T370","span":{"begin":109,"end":112},"obj":"CC"},{"id":"T369","span":{"begin":107,"end":108},"obj":"-COMMA-"},{"id":"T368","span":{"begin":102,"end":107},"obj":"NN"},{"id":"T367","span":{"begin":99,"end":101},"obj":"IN"},{"id":"T366","span":{"begin":90,"end":98},"obj":"NN"},{"id":"T365","span":{"begin":82,"end":89},"obj":"NN"},{"id":"T364","span":{"begin":78,"end":81},"obj":"NN"},{"id":"T363","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T362","span":{"begin":64,"end":74},"obj":"NN"},{"id":"T361","span":{"begin":52,"end":63},"obj":"JJ"},{"id":"T360","span":{"begin":44,"end":50},"obj":"NN"},{"id":"T359","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T358","span":{"begin":34,"end":37},"obj":"CC"},{"id":"T357","span":{"begin":32,"end":33},"obj":"-COMMA-"},{"id":"T356","span":{"begin":23,"end":32},"obj":"NN"},{"id":"T355","span":{"begin":21,"end":22},"obj":"-COMMA-"},{"id":"T354","span":{"begin":15,"end":21},"obj":"NN"},{"id":"T353","span":{"begin":10,"end":14},"obj":"NN"},{"id":"T352","span":{"begin":0,"end":9},"obj":"VB"}],"relations":[{"id":"R134","pred":"arg1Of","subj":"T354","obj":"T353"},{"id":"R135","pred":"arg1Of","subj":"T354","obj":"T355"},{"id":"R136","pred":"arg1Of","subj":"T355","obj":"T358"},{"id":"R137","pred":"arg2Of","subj":"T356","obj":"T355"},{"id":"R138","pred":"arg2Of","subj":"T358","obj":"T352"},{"id":"R139","pred":"arg1Of","subj":"T358","obj":"T357"},{"id":"R140","pred":"arg2Of","subj":"T360","obj":"T358"},{"id":"R141","pred":"arg1Of","subj":"T360","obj":"T359"},{"id":"R142","pred":"arg1Of","subj":"T362","obj":"T361"},{"id":"R143","pred":"arg1Of","subj":"T362","obj":"T363"},{"id":"R144","pred":"arg1Of","subj":"T362","obj":"T370"},{"id":"R145","pred":"arg2Of","subj":"T366","obj":"T363"},{"id":"R146","pred":"arg1Of","subj":"T366","obj":"T364"},{"id":"R147","pred":"arg1Of","subj":"T366","obj":"T365"},{"id":"R148","pred":"arg1Of","subj":"T366","obj":"T3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cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T177","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T176","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T175","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T174","span":{"begin":130,"end":133},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T551","span":{"begin":363,"end":372},"obj":"http://www.uniprot.org/uniprot/P42574"},{"id":"T550","span":{"begin":138,"end":141},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T549","span":{"begin":138,"end":141},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T548","span":{"begin":130,"end":133},"obj":"http://www.uniprot.org/uniprot/P19838"},{"id":"T541","span":{"begin":290,"end":294},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T540","span":{"begin":245,"end":249},"obj":"http://www.uniprot.org/uniprot/P51681"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    UBERON-AE

    {"project":"UBERON-AE","denotations":[{"id":"T114","span":{"begin":279,"end":286},"obj":"http://purl.obolibrary.org/obo/UBERON_0000479"},{"id":"T113","span":{"begin":234,"end":241},"obj":"http://purl.obolibrary.org/obo/UBERON_0000479"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T207","span":{"begin":185,"end":207},"obj":"http://purl.obolibrary.org/obo/GO_0007252"},{"id":"T206","span":{"begin":185,"end":200},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T205","span":{"begin":171,"end":207},"obj":"http://purl.obolibrary.org/obo/GO_1903720"},{"id":"T204","span":{"begin":171,"end":200},"obj":"http://purl.obolibrary.org/obo/GO_0042326"},{"id":"T203","span":{"begin":64,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0039568"},{"id":"T202","span":{"begin":64,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_1904743"},{"id":"T201","span":{"begin":64,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0043392"},{"id":"T200","span":{"begin":23,"end":32},"obj":"http://purl.obolibrary.org/obo/GO_0097194"},{"id":"T198","span":{"begin":23,"end":32},"obj":"http://purl.obolibrary.org/obo/GO_0006915"},{"id":"T197","span":{"begin":10,"end":21},"obj":"http://purl.obolibrary.org/obo/GO_0016049"},{"id":"T190","span":{"begin":44,"end":50},"obj":"http://purl.obolibrary.org/obo/GO_0040007"},{"id":"T189","span":{"begin":15,"end":21},"obj":"http://purl.obolibrary.org/obo/GO_0040007"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T214","span":{"begin":78,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0003677"},{"id":"T215","span":{"begin":82,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T210","span":{"begin":10,"end":14},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T213","span":{"begin":151,"end":158},"obj":"http://purl.obolibrary.org/obo/GO_0005634"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    sentences

    {"project":"sentences","denotations":[{"id":"T124","span":{"begin":52,"end":303},"obj":"Sentence"},{"id":"T7","span":{"begin":52,"end":303},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    simple1

    {"project":"simple1","denotations":[{"id":"T250","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T249","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T248","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T247","span":{"begin":130,"end":133},"obj":"Protein"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T581","span":{"begin":171,"end":181},"obj":"Negative_regulation"},{"id":"T580","span":{"begin":113,"end":126},"obj":"Localization"},{"id":"T567","span":{"begin":290,"end":294},"obj":"Protein"},{"id":"T566","span":{"begin":245,"end":249},"obj":"Protein"},{"id":"T565","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T564","span":{"begin":130,"end":133},"obj":"Protein"}],"relations":[{"id":"R318","pred":"themeOf","subj":"T564","obj":"T580"},{"id":"R319","pred":"themeOf","subj":"T565","obj":"T580"},{"id":"R324","pred":"themeOf","subj":"T580","obj":"T581"},{"id":"R325","pred":"themeOf","subj":"T580","obj":"T581"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T819","span":{"begin":355,"end":387},"obj":"Protein_catabolism"},{"id":"T810","span":{"begin":304,"end":309},"obj":"Protein"},{"id":"T808","span":{"begin":298,"end":302},"obj":"Protein"},{"id":"T805","span":{"begin":382,"end":386},"obj":"Protein"},{"id":"T801","span":{"begin":253,"end":257},"obj":"Protein"},{"id":"T799","span":{"begin":392,"end":395},"obj":"Protein"},{"id":"T795","span":{"begin":355,"end":387},"obj":"Protein"},{"id":"T791","span":{"begin":138,"end":141},"obj":"Protein"},{"id":"T782","span":{"begin":327,"end":334},"obj":"Protein"},{"id":"T780","span":{"begin":147,"end":158},"obj":"Entity"},{"id":"T777","span":{"begin":99,"end":107},"obj":"Protein"},{"id":"T775","span":{"begin":130,"end":133},"obj":"Protein"}],"relations":[{"id":"R421","pred":"themeOf","subj":"T795","obj":"T819"}],"text":"involving cell growth, apoptosis, and tumor growth. Significant inhibition of DNA binding activity of NF-κB, and translocation of p50 and p65 into the nucleus through the inhibition of phosphorylation of IκB was found in the melanoma tissues of CCR5−/− mice compared to melanoma tissues of CCR5+/+ mice. NF-κB target apoptotic protein expression, such as cleaved caspase-3, cleaved PARP, and Bax, was elevated, whereas the survival prot"}

    bionlp-st-ge-2016-spacy-parsed

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