PMC:3342329 / 33907-34111 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T16290","span":{"begin":181,"end":187},"obj":"VB"},{"id":"T16289","span":{"begin":178,"end":180},"obj":"TO"},{"id":"T16288","span":{"begin":176,"end":177},"obj":"-RRB-"},{"id":"T16287","span":{"begin":171,"end":176},"obj":"NN"},{"id":"T16286","span":{"begin":169,"end":170},"obj":"-COMMA-"},{"id":"T16285","span":{"begin":163,"end":169},"obj":"NN"},{"id":"T16284","span":{"begin":156,"end":162},"obj":"NN"},{"id":"T16283","span":{"begin":152,"end":155},"obj":"NN"},{"id":"T16282","span":{"begin":151,"end":152},"obj":"-LRB-"},{"id":"T16281","span":{"begin":144,"end":150},"obj":"NN"},{"id":"T16280","span":{"begin":138,"end":143},"obj":"NN"},{"id":"T16279","span":{"begin":135,"end":137},"obj":"IN"},{"id":"T16278","span":{"begin":128,"end":134},"obj":"VB"},{"id":"T16277","span":{"begin":123,"end":127},"obj":"RB"},{"id":"T16276","span":{"begin":119,"end":122},"obj":"CC"},{"id":"T16275","span":{"begin":117,"end":118},"obj":"-RRB-"},{"id":"T16274","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T16273","span":{"begin":104,"end":106},"obj":"NN"},{"id":"T16272","span":{"begin":102,"end":103},"obj":"-COLON-"},{"id":"T16271","span":{"begin":94,"end":102},"obj":"NN"},{"id":"T16270","span":{"begin":89,"end":93},"obj":"NN"},{"id":"T16269","span":{"begin":86,"end":88},"obj":"NN"},{"id":"T16268","span":{"begin":82,"end":85},"obj":"CD"},{"id":"T16267","span":{"begin":81,"end":82},"obj":"-LRB-"},{"id":"T16266","span":{"begin":72,"end":80},"obj":"VB"},{"id":"T16265","span":{"begin":70,"end":71},"obj":"-COMMA-"},{"id":"T16264","span":{"begin":67,"end":70},"obj":"NNP"},{"id":"T16263","span":{"begin":64,"end":66},"obj":"IN"},{"id":"T16262","span":{"begin":51,"end":63},"obj":"RB"},{"id":"T16261","span":{"begin":39,"end":50},"obj":"VB"},{"id":"T16260","span":{"begin":31,"end":38},"obj":"RB"},{"id":"T16259","span":{"begin":26,"end":30},"obj":"VB"},{"id":"T16258","span":{"begin":17,"end":25},"obj":"NN"},{"id":"T16257","span":{"begin":11,"end":16},"obj":"NN"},{"id":"T16256","span":{"begin":7,"end":10},"obj":"CC"},{"id":"T16255","span":{"begin":0,"end":6},"obj":"NN"},{"id":"T16293","span":{"begin":198,"end":203},"obj":"NN"},{"id":"T16292","span":{"begin":192,"end":197},"obj":"NN"},{"id":"T16291","span":{"begin":188,"end":191},"obj":"JJ"}],"relations":[{"id":"R11622","pred":"arg1Of","subj":"T16255","obj":"T16256"},{"id":"R11623","pred":"arg2Of","subj":"T16257","obj":"T16256"},{"id":"R11624","pred":"arg1Of","subj":"T16258","obj":"T16255"},{"id":"R11625","pred":"arg1Of","subj":"T16258","obj":"T16257"},{"id":"R11626","pred":"arg1Of","subj":"T16258","obj":"T16259"},{"id":"R11627","pred":"arg2Of","subj":"T16258","obj":"T16261"},{"id":"R11628","pred":"arg2Of","subj":"T16258","obj":"T16278"},{"id":"R11629","pred":"arg1Of","subj":"T16261","obj":"T16262"},{"id":"R11630","pred":"arg1Of","subj":"T16261","obj":"T16263"},{"id":"R11631","pred":"arg1Of","subj":"T16261","obj":"T16267"},{"id":"R11632","pred":"arg1Of","subj":"T16261","obj":"T16276"},{"id":"R11633","pred":"arg2Of","subj":"T16264","obj":"T16263"},{"id":"R11634","pred":"arg1Of","subj":"T16264","obj":"T16265"},{"id":"R11635","pred":"arg2Of","subj":"T16264","obj":"T16266"},{"id":"R11636","pred":"arg1Of","subj":"T16271","obj":"T16268"},{"id":"R11637","pred":"arg1Of","subj":"T16271","obj":"T16269"},{"id":"R11638","pred":"arg1Of","subj":"T16271","obj":"T16270"},{"id":"R11639","pred":"arg1Of","subj":"T16271","obj":"T16272"},{"id":"R11640","pred":"arg2Of","subj":"T16272","obj":"T16267"},{"id":"R11641","pred":"arg2Of","subj":"T16274","obj":"T16272"},{"id":"R11642","pred":"arg1Of","subj":"T16274","obj":"T16273"},{"id":"R11643","pred":"arg3Of","subj":"T16275","obj":"T16267"},{"id":"R11644","pred":"arg2Of","subj":"T16276","obj":"T16259"},{"id":"R11645","pred":"arg1Of","subj":"T16276","obj":"T16260"},{"id":"R11646","pred":"arg2Of","subj":"T16278","obj":"T16276"},{"id":"R11647","pred":"arg1Of","subj":"T16278","obj":"T16277"},{"id":"R11648","pred":"arg1Of","subj":"T16278","obj":"T16279"},{"id":"R11649","pred":"modOf","subj":"T16278","obj":"T16289"},{"id":"R11650","pred":"arg2Of","subj":"T16281","obj":"T16279"},{"id":"R11651","pred":"arg1Of","subj":"T16281","obj":"T16280"},{"id":"R11652","pred":"arg1Of","subj":"T16281","obj":"T16282"},{"id":"R11653","pred":"arg2Of","subj":"T16285","obj":"T16282"},{"id":"R11654","pred":"arg1Of","subj":"T16285","obj":"T16283"},{"id":"R11655","pred":"arg1Of","subj":"T16285","obj":"T16284"},{"id":"R11656","pred":"arg1Of","subj":"T16285","obj":"T16286"},{"id":"R11657","pred":"arg2Of","subj":"T16287","obj":"T16286"},{"id":"R11658","pred":"arg3Of","subj":"T16288","obj":"T16282"},{"id":"R11659","pred":"arg1Of","subj":"T16290","obj":"T16289"},{"id":"R11660","pred":"arg2Of","subj":"T16293","obj":"T16290"},{"id":"R11661","pred":"arg1Of","subj":"T16293","obj":"T16291"},{"id":"R11662","pred":"arg1Of","subj":"T16293","obj":"T16292"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}

    UBERON-AE

    {"project":"UBERON-AE","denotations":[{"id":"T16195","span":{"begin":192,"end":197},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T16210","span":{"begin":138,"end":143},"obj":"http://purl.obolibrary.org/obo/GO_0019835"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T16212","span":{"begin":89,"end":93},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}

    sentences

    {"project":"sentences","denotations":[{"id":"T16200","span":{"begin":0,"end":204},"obj":"Sentence"},{"id":"T255","span":{"begin":0,"end":204},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T16719","span":{"begin":82,"end":102},"obj":"Entity"},{"id":"T16715","span":{"begin":152,"end":177},"obj":"Protein"},{"id":"T16710","span":{"begin":188,"end":203},"obj":"Entity"},{"id":"T16700","span":{"begin":156,"end":162},"obj":"Protein"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T16527","span":{"begin":144,"end":150},"obj":"NN"},{"id":"T16526","span":{"begin":138,"end":143},"obj":"NN"},{"id":"T16525","span":{"begin":135,"end":137},"obj":"IN"},{"id":"T16524","span":{"begin":128,"end":134},"obj":"VBN"},{"id":"T16523","span":{"begin":123,"end":127},"obj":"RB"},{"id":"T16522","span":{"begin":119,"end":122},"obj":"CC"},{"id":"T16521","span":{"begin":117,"end":118},"obj":"-RRB-"},{"id":"T16520","span":{"begin":107,"end":117},"obj":"NNP"},{"id":"T16519","span":{"begin":104,"end":106},"obj":"NNP"},{"id":"T16518","span":{"begin":102,"end":103},"obj":":"},{"id":"T16517","span":{"begin":94,"end":102},"obj":"NN"},{"id":"T16516","span":{"begin":89,"end":93},"obj":"NN"},{"id":"T16515","span":{"begin":86,"end":88},"obj":"NN"},{"id":"T16514","span":{"begin":82,"end":85},"obj":"CD"},{"id":"T16513","span":{"begin":81,"end":82},"obj":"-LRB-"},{"id":"T16512","span":{"begin":72,"end":80},"obj":"VBN"},{"id":"T16511","span":{"begin":70,"end":71},"obj":","},{"id":"T16510","span":{"begin":67,"end":70},"obj":"NNP"},{"id":"T16509","span":{"begin":64,"end":66},"obj":"IN"},{"id":"T16508","span":{"begin":51,"end":63},"obj":"RB"},{"id":"T16507","span":{"begin":39,"end":50},"obj":"VBN"},{"id":"T16506","span":{"begin":31,"end":38},"obj":"RB"},{"id":"T16505","span":{"begin":26,"end":30},"obj":"VBD"},{"id":"T16504","span":{"begin":17,"end":25},"obj":"NNS"},{"id":"T16503","span":{"begin":11,"end":16},"obj":"NN"},{"id":"T16502","span":{"begin":7,"end":10},"obj":"CC"},{"id":"T16501","span":{"begin":0,"end":6},"obj":"NNP"},{"id":"T16540","span":{"begin":203,"end":204},"obj":"."},{"id":"T16539","span":{"begin":198,"end":203},"obj":"NNS"},{"id":"T16538","span":{"begin":192,"end":197},"obj":"NN"},{"id":"T16537","span":{"begin":188,"end":191},"obj":"JJ"},{"id":"T16536","span":{"begin":181,"end":187},"obj":"VB"},{"id":"T16535","span":{"begin":178,"end":180},"obj":"TO"},{"id":"T16534","span":{"begin":176,"end":177},"obj":"-RRB-"},{"id":"T16533","span":{"begin":171,"end":176},"obj":"NNP"},{"id":"T16532","span":{"begin":169,"end":170},"obj":","},{"id":"T16531","span":{"begin":163,"end":169},"obj":"NN"},{"id":"T16530","span":{"begin":156,"end":162},"obj":"VBG"},{"id":"T16529","span":{"begin":152,"end":155},"obj":"NNP"},{"id":"T16528","span":{"begin":151,"end":152},"obj":"-LRB-"}],"relations":[{"id":"R11847","pred":"nsubjpass","subj":"T16501","obj":"T16507"},{"id":"R11848","pred":"cc","subj":"T16502","obj":"T16501"},{"id":"R11849","pred":"compound","subj":"T16503","obj":"T16504"},{"id":"R11850","pred":"conj","subj":"T16504","obj":"T16501"},{"id":"R11851","pred":"auxpass","subj":"T16505","obj":"T16507"},{"id":"R11852","pred":"advmod","subj":"T16506","obj":"T16507"},{"id":"R11853","pred":"ccomp","subj":"T16507","obj":"T16524"},{"id":"R11854","pred":"advmod","subj":"T16508","obj":"T16507"},{"id":"R11855","pred":"prep","subj":"T16509","obj":"T16507"},{"id":"R11856","pred":"pobj","subj":"T16510","obj":"T16509"},{"id":"R11857","pred":"punct","subj":"T16511","obj":"T16507"},{"id":"R11858","pred":"conj","subj":"T16512","obj":"T16507"},{"id":"R11859","pred":"punct","subj":"T16513","obj":"T16517"},{"id":"R11860","pred":"nummod","subj":"T16514","obj":"T16517"},{"id":"R11861","pred":"compound","subj":"T16515","obj":"T16517"},{"id":"R11862","pred":"compound","subj":"T16516","obj":"T16517"},{"id":"R11863","pred":"appos","subj":"T16517","obj":"T16512"},{"id":"R11864","pred":"punct","subj":"T16518","obj":"T16524"},{"id":"R11865","pred":"compound","subj":"T16519","obj":"T16520"},{"id":"R11866","pred":"nsubj","subj":"T16520","obj":"T16524"},{"id":"R11867","pred":"punct","subj":"T16521","obj":"T16520"},{"id":"R11868","pred":"cc","subj":"T16522","obj":"T16520"},{"id":"R11869","pred":"advmod","subj":"T16523","obj":"T16524"},{"id":"R11870","pred":"ROOT","subj":"T16524","obj":"T16524"},{"id":"R11871","pred":"prep","subj":"T16525","obj":"T16524"},{"id":"R11872","pred":"compound","subj":"T16526","obj":"T16527"},{"id":"R11873","pred":"pobj","subj":"T16527","obj":"T16525"},{"id":"R11874","pred":"punct","subj":"T16528","obj":"T16531"},{"id":"R11875","pred":"compound","subj":"T16529","obj":"T16531"},{"id":"R11876","pred":"compound","subj":"T16530","obj":"T16531"},{"id":"R11877","pred":"appos","subj":"T16531","obj":"T16527"},{"id":"R11878","pred":"punct","subj":"T16532","obj":"T16531"},{"id":"R11879","pred":"appos","subj":"T16533","obj":"T16531"},{"id":"R11880","pred":"punct","subj":"T16534","obj":"T16531"},{"id":"R11881","pred":"aux","subj":"T16535","obj":"T16536"},{"id":"R11882","pred":"advcl","subj":"T16536","obj":"T16524"},{"id":"R11883","pred":"amod","subj":"T16537","obj":"T16539"},{"id":"R11884","pred":"compound","subj":"T16538","obj":"T16539"},{"id":"R11885","pred":"dobj","subj":"T16539","obj":"T16536"},{"id":"R11886","pred":"punct","subj":"T16540","obj":"T16524"}],"text":"Spleen and tumor biopsies were briefly homogenized mechanically in PBS, filtered (100 µm cell strainer; BD PharMingen) and then placed in lysis buffer (ACK lysing buffer, LONZA) to remove red blood cells."}