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PMC:3342329 / 2665-2865 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T1334 85-89 Protein denotes CCR5
T1333 32-36 Protein denotes CCR5
T1287 85-89 Protein denotes CCR5
T1286 32-36 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T1213 85-89 Protein denotes CCR5
T1212 32-36 Protein denotes CCR5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2906 85-89 Protein denotes CCR5
T2905 32-36 Protein denotes CCR5
T2949 21-28 Negative_regulation denotes absence
T2948 90-100 Negative_regulation denotes inhibitors
R1886 T2905 T2949 themeOf CCR5,absence
R1888 T2906 T2948 themeOf CCR5,inhibitors

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4168 85-89 Protein denotes CCR5
T4167 32-36 Protein denotes CCR5
T4211 21-28 Negative_regulation denotes absence
T4210 90-100 Negative_regulation denotes inhibitors
R2971 T4167 T4211 themeOf CCR5,absence
R2972 T4168 T4210 themeOf CCR5,inhibitors

2_test

Id Subject Object Predicate Lexical cue
22567084-12682253-91707007 76-78 12682253 denotes 10
22567084-20579875-91707008 156-158 20579875 denotes 11
22567084-17259344-91707009 192-193 17259344 denotes 4

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1982 196-199 CC denotes and
T1981 194-195 -COMMA- denotes ,
T1980 193-194 -RRB- denotes ]
T1979 192-193 CD denotes 4
T1978 191-192 -LRB- denotes [
T1977 185-190 NN denotes cells
T1976 176-184 NN denotes hepatoma
T1975 174-175 -COMMA- denotes ,
T1974 168-174 NN denotes cancer
T1973 161-167 NN denotes breast
T1972 159-160 -COMMA- denotes ,
T1971 158-159 -RRB- denotes ]
T1970 156-158 CD denotes 11
T1969 155-156 -LRB- denotes [
T1968 148-154 NN denotes cancer
T1967 139-147 NN denotes prostate
T1966 136-138 IN denotes as
T1965 131-135 JJ denotes such
T1964 129-130 -COMMA- denotes ,
T1963 123-129 NN denotes growth
T1962 118-122 NN denotes cell
T1961 111-117 NN denotes cancer
T1960 101-110 VB denotes prevented
T1959 90-100 NN denotes inhibitors
T1958 85-89 NN denotes CCR5
T1957 81-84 CC denotes and
T1956 79-80 -COMMA- denotes ,
T1955 78-79 -RRB- denotes ]
T1954 76-78 CD denotes 10
T1953 75-76 -LRB- denotes [
T1952 68-74 NN denotes growth
T1951 62-67 NN denotes tumor
T1950 59-61 IN denotes of
T1949 53-58 NN denotes delay
T1948 49-52 DT denotes the
T1947 37-48 VB denotes potentiates
T1946 32-36 NN denotes CCR5
T1945 29-31 IN denotes of
T1944 21-28 NN denotes absence
T1943 16-20 NN denotes host
T1942 14-15 -COMMA- denotes ,
T1941 6-14 NN denotes addition
T1940 3-5 IN denotes In
T1939 0-1 -RRB- denotes ]
R1014 T1941 T1940 arg2Of addition,In
R1015 T1944 T1943 arg1Of absence,host
R1016 T1944 T1945 arg1Of absence,of
R1017 T1944 T1947 arg1Of absence,potentiates
R1018 T1946 T1945 arg2Of CCR5,of
R1019 T1947 T1957 arg1Of potentiates,and
R1020 T1949 T1947 arg2Of delay,potentiates
R1021 T1949 T1948 arg1Of delay,the
R1022 T1949 T1950 arg1Of delay,of
R1023 T1952 T1950 arg2Of growth,of
R1024 T1952 T1951 arg1Of growth,tumor
R1025 T1952 T1953 arg1Of growth,[
R1026 T1954 T1953 arg2Of 10,[
R1027 T1955 T1953 arg3Of ],[
R1028 T1957 T1940 arg1Of and,In
R1029 T1957 T1942 arg1Of and,","
R1030 T1957 T1956 arg1Of and,","
R1031 T1959 T1958 arg1Of inhibitors,CCR5
R1032 T1959 T1960 arg1Of inhibitors,prevented
R1033 T1960 T1957 arg2Of prevented,and
R1034 T1963 T1960 arg2Of growth,prevented
R1035 T1963 T1961 arg1Of growth,cancer
R1036 T1963 T1962 arg1Of growth,cell
R1037 T1963 T1964 arg1Of growth,","
R1038 T1963 T1966 arg1Of growth,as
R1039 T1966 T1965 arg1Of as,such
R1040 T1968 T1967 arg1Of cancer,prostate
R1041 T1968 T1969 arg1Of cancer,[
R1042 T1968 T1972 arg1Of cancer,","
R1043 T1970 T1969 arg2Of 11,[
R1044 T1971 T1969 arg3Of ],[
R1045 T1972 T1975 arg1Of ",",","
R1046 T1974 T1972 arg2Of cancer,","
R1047 T1974 T1973 arg1Of cancer,breast
R1048 T1975 T1982 arg1Of ",",and
R1049 T1977 T1975 arg2Of cells,","
R1050 T1977 T1976 arg1Of cells,hepatoma
R1051 T1977 T1978 arg1Of cells,[
R1052 T1979 T1978 arg2Of 4,[
R1053 T1980 T1978 arg3Of ],[
R1054 T1982 T1966 arg2Of and,as
R1055 T1982 T1981 arg1Of and,","

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1528 85-89 Protein denotes CCR5
T1527 32-36 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T2726 85-89 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T2725 32-36 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T1396 161-167 http://purl.obolibrary.org/obo/UBERON_0000310 denotes breast

GO-BP

Id Subject Object Predicate Lexical cue
T1573 123-129 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T1572 68-74 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T1568 118-129 http://purl.obolibrary.org/obo/GO_0016049 denotes cell growth

GO-CC

Id Subject Object Predicate Lexical cue
T1643 16-20 http://purl.obolibrary.org/obo/GO_0018995 denotes host
T1638 118-122 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

simple1

Id Subject Object Predicate Lexical cue
T1682 85-89 Protein denotes CCR5
T1681 32-36 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T2809 90-100 Negative_regulation denotes inhibitors
T2808 21-28 Negative_regulation denotes absence
T2766 85-89 Protein denotes CCR5
T2765 32-36 Protein denotes CCR5
R1820 T2765 T2808 themeOf CCR5,absence
R1821 T2766 T2809 themeOf CCR5,inhibitors

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4338 176-194 Entity denotes hepatoma cells [4]
T4322 85-100 Entity denotes CCR5 inhibitors
T4285 29-36 Protein denotes of CCR5
T4260 85-89 Protein denotes CCR5

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3372 156-158 CD denotes 11
T3371 155-156 NNP denotes [
T3370 148-154 NN denotes cancer
T3369 139-147 NN denotes prostate
T3368 136-138 IN denotes as
T3367 131-135 JJ denotes such
T3366 129-130 , denotes ,
T3365 123-129 NN denotes growth
T3364 118-122 NN denotes cell
T3363 111-117 NN denotes cancer
T3362 101-110 VBD denotes prevented
T3361 90-100 NNS denotes inhibitors
T3360 85-89 NNP denotes CCR5
T3359 81-84 CC denotes and
T3358 79-80 , denotes ,
T3357 78-79 NNP denotes ]
T3356 76-78 CD denotes 10
T3355 75-76 NNP denotes [
T3354 68-74 NN denotes growth
T3353 62-67 NN denotes tumor
T3352 59-61 IN denotes of
T3351 53-58 NN denotes delay
T3350 49-52 DT denotes the
T3349 37-48 NNS denotes potentiates
T3348 32-36 CD denotes CCR5
T3347 29-31 IN denotes of
T3346 21-28 NN denotes absence
T3345 16-20 NN denotes host
T3344 14-15 , denotes ,
T3343 6-14 NN denotes addition
T3342 3-5 IN denotes In
T3341 1-2 . denotes .
T3340 0-1 NNP denotes ]
T3384 196-199 CC denotes and
T3383 194-195 , denotes ,
T3382 193-194 NNP denotes ]
T3381 192-193 CD denotes 4
T3380 191-192 VBP denotes [
T3379 185-190 NNS denotes cells
T3378 176-184 NN denotes hepatoma
T3377 174-175 , denotes ,
T3376 168-174 NN denotes cancer
T3375 161-167 NN denotes breast
T3374 159-160 , denotes ,
T3373 158-159 NNP denotes ]
R2121 T3342 T3362 prep In,prevented
R2122 T3343 T3342 pobj addition,In
R2123 T3344 T3362 punct ",",prevented
R2125 T3345 T3346 compound host,absence
R2126 T3346 T3362 nsubj absence,prevented
R2127 T3347 T3346 prep of,absence
R2128 T3348 T3349 nummod CCR5,potentiates
R2130 T3349 T3347 pobj potentiates,of
R2131 T3350 T3351 det the,delay
R2132 T3351 T3346 conj delay,absence
R2134 T3352 T3351 prep of,delay
R2135 T3353 T3354 compound tumor,growth
R2136 T3354 T3352 pobj growth,of
R2137 T3355 T3357 nmod [,]
R2139 T3356 T3357 nummod 10,]
R2140 T3357 T3361 nmod ],inhibitors
R2141 T3358 T3357 punct ",",]
R2143 T3359 T3357 cc and,]
R2144 T3360 T3357 conj CCR5,]
R2145 T3361 T3362 nsubj inhibitors,prevented
R2146 T3362 T3362 ROOT prevented,prevented
R2148 T3363 T3364 compound cancer,cell
R2149 T3364 T3365 compound cell,growth
R2150 T3365 T3362 dobj growth,prevented
R2152 T3366 T3362 punct ",",prevented
R2153 T3367 T3368 amod such,as
R2154 T3368 T3362 prep as,prevented
R2155 T3369 T3370 compound prostate,cancer
R2156 T3370 T3371 compound cancer,[
R2157 T3371 T3368 pobj [,as
R2159 T3372 T3373 nummod 11,]
R2162 T3373 T3371 conj ],[
R2163 T3374 T3373 punct ",",]
R2165 T3375 T3376 compound breast,cancer
R2166 T3376 T3371 conj cancer,[
R2168 T3377 T3376 punct ",",cancer
R2169 T3378 T3379 compound hepatoma,cells
R2171 T3379 T3376 conj cells,cancer
R2172 T3380 T3382 nmod [,]
R2173 T3381 T3382 nummod 4,]
R2175 T3382 T3362 dobj ],prevented
R2176 T3383 T3382 punct ",",]
R2177 T3384 T3382 cc and,]

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2976 90-100 Negative_regulation denotes inhibitors
T2975 21-28 Negative_regulation denotes absence
T2974 85-89 Protein denotes CCR5
T2973 32-36 Protein denotes CCR5
R1900 T2973 T2975 themeOf CCR5,absence
R1903 T2974 T2976 themeOf CCR5,inhibitors