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PMC:3342329 / 16555-16754 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T7310 36-40 Protein denotes CCR5
T7289 36-40 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T7268 36-40 Protein denotes CCR5

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8013 36-40 Protein denotes CCR5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7890 36-40 Protein denotes CCR5

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7527 197-198 -RRB- denotes )
T7526 195-197 NN denotes 5A
T7525 188-194 NN denotes Figure
T7524 187-188 -LRB- denotes (
T7523 181-186 NN denotes cells
T7522 178-180 NN denotes NK
T7521 165-177 VB denotes infiltrating
T7520 162-164 IN denotes of
T7519 155-161 NN denotes number
T7518 151-154 DT denotes the
T7517 148-150 IN denotes in
T7516 139-147 NN denotes increase
T7515 136-138 DT denotes an
T7514 133-135 IN denotes as
T7513 128-132 RB denotes well
T7512 125-127 RB denotes as
T7511 123-124 -COMMA- denotes ,
T7510 118-123 NN denotes tumor
T7509 114-117 DT denotes the
T7508 109-113 IN denotes into
T7507 103-108 NN denotes cells
T7506 98-102 JJ denotes CD8+
T7505 95-97 IN denotes of
T7504 88-94 NN denotes influx
T7503 76-87 JJ denotes significant
T7502 74-75 DT denotes a
T7501 70-73 VB denotes was
T7500 64-69 EX denotes there
T7499 59-63 IN denotes that
T7498 53-58 VB denotes found
T7497 50-52 PRP denotes we
T7496 48-49 -COMMA- denotes ,
T7495 44-48 NN denotes mice
T7494 36-43 NN denotes CCR5−/−
T7493 31-35 IN denotes from
T7492 22-30 NN denotes sections
T7491 16-21 NN denotes tumor
T7490 12-15 DT denotes the
T7489 3-11 VB denotes staining
T7488 0-2 IN denotes By
R4968 T7489 T7488 arg2Of staining,By
R4969 T7492 T7489 arg2Of sections,staining
R4970 T7492 T7490 arg1Of sections,the
R4971 T7492 T7491 arg1Of sections,tumor
R4972 T7492 T7493 arg1Of sections,from
R4973 T7495 T7493 arg2Of mice,from
R4974 T7495 T7494 arg1Of mice,CCR5−/−
R4975 T7497 T7489 arg1Of we,staining
R4976 T7497 T7498 arg1Of we,found
R4977 T7498 T7488 arg1Of found,By
R4978 T7498 T7496 arg1Of found,","
R4979 T7500 T7501 arg1Of there,was
R4980 T7501 T7498 arg2Of was,found
R4981 T7501 T7499 arg1Of was,that
R4982 T7504 T7502 arg1Of influx,a
R4983 T7504 T7503 arg1Of influx,significant
R4984 T7504 T7505 arg1Of influx,of
R4985 T7504 T7508 arg1Of influx,into
R4986 T7504 T7514 arg1Of influx,as
R4987 T7507 T7505 arg2Of cells,of
R4988 T7507 T7506 arg1Of cells,CD8+
R4989 T7510 T7508 arg2Of tumor,into
R4990 T7510 T7509 arg1Of tumor,the
R4991 T7514 T7501 arg2Of as,was
R4992 T7514 T7511 arg1Of as,","
R4993 T7514 T7512 arg1Of as,as
R4994 T7514 T7513 arg1Of as,well
R4995 T7516 T7514 arg2Of increase,as
R4996 T7516 T7515 arg1Of increase,an
R4997 T7516 T7517 arg1Of increase,in
R4998 T7519 T7517 arg2Of number,in
R4999 T7519 T7518 arg1Of number,the
R5000 T7519 T7520 arg1Of number,of
R5001 T7523 T7520 arg2Of cells,of
R5002 T7523 T7521 arg1Of cells,infiltrating
R5003 T7523 T7522 arg1Of cells,NK
R5004 T7523 T7524 arg1Of cells,(
R5005 T7526 T7524 arg2Of 5A,(
R5006 T7526 T7525 arg1Of 5A,Figure
R5007 T7527 T7524 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7377 36-40 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7931 36-40 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T7921 98-101 http://www.uniprot.org/uniprot/P10966 denotes CD8
T7911 98-101 http://www.uniprot.org/uniprot/P01732 denotes CD8

GO-CC

Id Subject Object Predicate Lexical cue
T7402 181-186 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7401 103-108 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T7344 0-199 Sentence denotes By staining the tumor sections from CCR5−/− mice, we found that there was a significant influx of CD8+ cells into the tumor, as well as an increase in the number of infiltrating NK cells (Figure 5A).
T133 0-199 Sentence denotes By staining the tumor sections from CCR5−/− mice, we found that there was a significant influx of CD8+ cells into the tumor, as well as an increase in the number of infiltrating NK cells (Figure 5A).

simple1

Id Subject Object Predicate Lexical cue
T7415 36-40 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T7967 36-40 Protein denotes CCR5

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8669 125-198 Binding denotes as well as an increase in the number of infiltrating NK cells (Figure 5A)
T8667 36-48 Protein denotes CCR5−/− mice
T8666 98-108 Entity denotes CD8+ cells
T8627 178-198 Entity denotes NK cells (Figure 5A)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8209 198-199 . denotes .
T8208 197-198 -RRB- denotes )
T8207 195-197 NN denotes 5A
T8206 188-194 NN denotes Figure
T8205 187-188 -LRB- denotes (
T8204 181-186 NNS denotes cells
T8203 178-180 NNP denotes NK
T8202 165-177 VBG denotes infiltrating
T8201 162-164 IN denotes of
T8200 155-161 NN denotes number
T8199 151-154 DT denotes the
T8198 148-150 IN denotes in
T8197 139-147 NN denotes increase
T8196 136-138 DT denotes an
T8195 133-135 IN denotes as
T8194 128-132 RB denotes well
T8193 125-127 RB denotes as
T8192 123-124 , denotes ,
T8191 118-123 NN denotes tumor
T8190 114-117 DT denotes the
T8189 109-113 IN denotes into
T8188 103-108 NNS denotes cells
T8187 101-102 CD denotes +
T8186 98-101 CD denotes CD8
T8185 95-97 IN denotes of
T8184 88-94 NN denotes influx
T8183 76-87 JJ denotes significant
T8182 74-75 DT denotes a
T8181 70-73 VBD denotes was
T8180 64-69 EX denotes there
T8179 59-63 IN denotes that
T8178 53-58 VBD denotes found
T8177 50-52 PRP denotes we
T8176 48-49 , denotes ,
T8175 44-48 NNS denotes mice
T8174 42-43 NN denotes −
T8173 41-42 NN denotes /
T8172 40-41 CD denotes −
T8171 36-40 CD denotes CCR5
T8170 31-35 IN denotes from
T8169 22-30 NNS denotes sections
T8168 16-21 NN denotes tumor
T8167 12-15 DT denotes the
T8166 3-11 VBG denotes staining
T8165 0-2 IN denotes By
R5430 T8165 T8178 prep By,found
R5431 T8166 T8165 pcomp staining,By
R5432 T8167 T8169 det the,sections
R5433 T8168 T8169 compound tumor,sections
R5434 T8169 T8166 dobj sections,staining
R5435 T8170 T8166 prep from,staining
R5436 T8171 T8172 nummod CCR5,−
R5437 T8172 T8175 nummod −,mice
R5438 T8173 T8175 nmod /,mice
R5439 T8174 T8175 compound −,mice
R5440 T8175 T8170 pobj mice,from
R5441 T8176 T8178 punct ",",found
R5442 T8177 T8178 nsubj we,found
R5443 T8178 T8178 ROOT found,found
R5444 T8179 T8181 mark that,was
R5445 T8180 T8181 expl there,was
R5446 T8181 T8178 ccomp was,found
R5447 T8182 T8184 det a,influx
R5448 T8183 T8184 amod significant,influx
R5449 T8184 T8181 attr influx,was
R5450 T8185 T8184 prep of,influx
R5451 T8186 T8188 nummod CD8,cells
R5452 T8187 T8188 nummod +,cells
R5453 T8188 T8185 pobj cells,of
R5454 T8189 T8184 prep into,influx
R5455 T8190 T8191 det the,tumor
R5456 T8191 T8189 pobj tumor,into
R5457 T8192 T8184 punct ",",influx
R5458 T8193 T8195 advmod as,as
R5459 T8194 T8195 advmod well,as
R5460 T8195 T8184 cc as,influx
R5461 T8196 T8197 det an,increase
R5462 T8197 T8184 conj increase,influx
R5463 T8198 T8197 prep in,increase
R5464 T8199 T8200 det the,number
R5465 T8200 T8198 pobj number,in
R5466 T8201 T8200 prep of,number
R5467 T8202 T8201 pcomp infiltrating,of
R5468 T8203 T8204 compound NK,cells
R5469 T8204 T8202 dobj cells,infiltrating
R5470 T8205 T8207 punct (,5A
R5471 T8206 T8207 compound Figure,5A
R5472 T8207 T8204 appos 5A,cells
R5473 T8208 T8204 punct ),cells
R5474 T8209 T8178 punct .,found

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T8036 98-102 Protein denotes CD8+