PMC:3342329 / 13807-14647
Annnotations
test3
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testone
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BioNLP16_Messiy
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BioNLP16_DUT
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pmc-enju-pas
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investigate the difference in the cytokine levels between the tumor and spleen tissues of the CCR5+/+ and CCR5−/− mice, we conducted a cytokine array assay using a Mouse Proteome Array (Figure 4A). Among 40 tested cytokines, the levels of IL-1Ra, MIG, MIP-1α increased about 686, 9 and 25-fold respectively, in CCR5−/− mice compared to CCR5+/+ mice. Using this technique, no other cytokines were found to be different between the CCR5−/− mice and the CCR5+/+ mice (Figure 4B). Similar altered cytokine levels were found in the spleens of CCR5−/− mice (Figure 4C). Since the IL-1Ra level was the most significantly elevated, the expression of IL-1Ra in tumor and spleen tissues was analyzed by immunofluorescence and western blotting. The expression of IL-1Ra was upregulated in tumor and spleen tissues of the CCR5−/− mice (Figure 4D-G)."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T6682","span":{"begin":813,"end":817},"obj":"Protein"},{"id":"T6681","span":{"begin":755,"end":761},"obj":"Protein"},{"id":"T6680","span":{"begin":645,"end":651},"obj":"Protein"},{"id":"T6679","span":{"begin":577,"end":583},"obj":"Protein"},{"id":"T6678","span":{"begin":541,"end":545},"obj":"Protein"},{"id":"T6677","span":{"begin":454,"end":458},"obj":"Protein"},{"id":"T6676","span":{"begin":433,"end":437},"obj":"Protein"},{"id":"T6675","span":{"begin":339,"end":343},"obj":"Protein"},{"id":"T6674","span":{"begin":314,"end":318},"obj":"Protein"},{"id":"T6673","span":{"begin":255,"end":261},"obj":"Protein"},{"id":"T6672","span":{"begin":250,"end":253},"obj":"Protein"},{"id":"T6671","span":{"begin":242,"end":248},"obj":"Protein"},{"id":"T6670","span":{"begin":109,"end":113},"obj":"Protein"},{"id":"T6669","span":{"begin":97,"end":101},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To investigate the difference in the cytokine levels between the tumor and spleen tissues of the CCR5+/+ and CCR5−/− mice, we conducted a cytokine array assay using a Mouse Proteome Array (Figure 4A). Among 40 tested cytokines, the levels of IL-1Ra, MIG, MIP-1α increased about 686, 9 and 25-fold respectively, in CCR5−/− mice compared to CCR5+/+ mice. Using this technique, no other cytokines were found to be different between the CCR5−/− mice and the CCR5+/+ mice (Figure 4B). Similar altered cytokine levels were found in the spleens of CCR5−/− mice (Figure 4C). Since the IL-1Ra level was the most significantly elevated, the expression of IL-1Ra in tumor and spleen tissues was analyzed by immunofluorescence and western blotting. The expression of IL-1Ra was upregulated in tumor and spleen tissues of the CCR5−/− mice (Figure 4D-G)."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7106","span":{"begin":255,"end":261},"obj":"http://www.uniprot.org/uniprot/P10147"},{"id":"T7105","span":{"begin":813,"end":817},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7104","span":{"begin":541,"end":545},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7103","span":{"begin":454,"end":458},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7102","span":{"begin":433,"end":437},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7101","span":{"begin":339,"end":343},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7100","span":{"begin":314,"end":318},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7099","span":{"begin":109,"end":113},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7098","span":{"begin":97,"end":101},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T7096","span":{"begin":755,"end":761},"obj":"http://www.uniprot.org/uniprot/P18510"},{"id":"T7095","span":{"begin":645,"end":651},"obj":"http://www.uniprot.org/uniprot/P18510"},{"id":"T7094","span":{"begin":577,"end":583},"obj":"http://www.uniprot.org/uniprot/P18510"},{"id":"T7093","span":{"begin":242,"end":248},"obj":"http://www.uniprot.org/uniprot/P18510"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To investigate the difference in the cytokine levels between the tumor and spleen tissues of the CCR5+/+ and CCR5−/− mice, we conducted a cytokine array assay using a Mouse Proteome Array (Figure 4A). Among 40 tested cytokines, the levels of IL-1Ra, MIG, MIP-1α increased about 686, 9 and 25-fold respectively, in CCR5−/− mice compared to CCR5+/+ mice. Using this technique, no other cytokines were found to be different between the CCR5−/− mice and the CCR5+/+ mice (Figure 4B). Similar altered cytokine levels were found in the spleens of CCR5−/− mice (Figure 4C). Since the IL-1Ra level was the most significantly elevated, the expression of IL-1Ra in tumor and spleen tissues was analyzed by immunofluorescence and western blotting. The expression of IL-1Ra was upregulated in tumor and spleen tissues of the CCR5−/− mice (Figure 4D-G)."}
UBERON-AE
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sentences
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simple1
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DLUT931
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bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T7228","span":{"begin":737,"end":761},"obj":"Gene_expression"},{"id":"T7226","span":{"begin":627,"end":726},"obj":"Gene_expression"},{"id":"T7225","span":{"begin":737,"end":820},"obj":"Positive_regulation"},{"id":"T7224","span":{"begin":322,"end":326},"obj":"Protein"},{"id":"T7222","span":{"begin":821,"end":825},"obj":"Protein"},{"id":"T7221","span":{"begin":538,"end":565},"obj":"Protein"},{"id":"T7220","span":{"begin":250,"end":254},"obj":"Protein"},{"id":"T7219","span":{"begin":33,"end":45},"obj":"Protein"},{"id":"T7218","span":{"begin":136,"end":199},"obj":"Protein"},{"id":"T7217","span":{"begin":242,"end":248},"obj":"Protein"},{"id":"T7216","span":{"begin":642,"end":651},"obj":"Protein"},{"id":"T7215","span":{"begin":752,"end":761},"obj":"Protein"},{"id":"T7214","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T7213","span":{"begin":429,"end":445},"obj":"Protein"},{"id":"T7211","span":{"begin":375,"end":393},"obj":"Protein"},{"id":"T7210","span":{"begin":450,"end":478},"obj":"Protein"},{"id":"T7209","span":{"begin":577,"end":583},"obj":"Protein"},{"id":"T7208","span":{"begin":217,"end":249},"obj":"Protein"},{"id":"T7207","span":{"begin":250,"end":261},"obj":"Protein"},{"id":"T7206","span":{"begin":347,"end":351},"obj":"Protein"}],"relations":[{"id":"R4909","pred":"themeOf","subj":"T7215","obj":"T7228"},{"id":"R4910","pred":"themeOf","subj":"T7216","obj":"T7226"},{"id":"R4912","pred":"themeOf","subj":"T7228","obj":"T7225"}],"text":"To investigate the difference in the cytokine levels between the tumor and spleen tissues of the CCR5+/+ and CCR5−/− mice, we conducted a cytokine array assay using a Mouse Proteome Array (Figure 4A). Among 40 tested cytokines, the levels of IL-1Ra, MIG, MIP-1α increased about 686, 9 and 25-fold respectively, in CCR5−/− mice compared to CCR5+/+ mice. Using this technique, no other cytokines were found to be different between the CCR5−/− mice and the CCR5+/+ mice (Figure 4B). Similar altered cytokine levels were found in the spleens of CCR5−/− mice (Figure 4C). Since the IL-1Ra level was the most significantly elevated, the expression of IL-1Ra in tumor and spleen tissues was analyzed by immunofluorescence and western blotting. The expression of IL-1Ra was upregulated in tumor and spleen tissues of the CCR5−/− mice (Figure 4D-G)."}
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investigate the difference in the cytokine levels between the tumor and spleen tissues of the CCR5+/+ and CCR5−/− mice, we conducted a cytokine array assay using a Mouse Proteome Array (Figure 4A). Among 40 tested cytokines, the levels of IL-1Ra, MIG, MIP-1α increased about 686, 9 and 25-fold respectively, in CCR5−/− mice compared to CCR5+/+ mice. Using this technique, no other cytokines were found to be different between the CCR5−/− mice and the CCR5+/+ mice (Figure 4B). Similar altered cytokine levels were found in the spleens of CCR5−/− mice (Figure 4C). Since the IL-1Ra level was the most significantly elevated, the expression of IL-1Ra in tumor and spleen tissues was analyzed by immunofluorescence and western blotting. The expression of IL-1Ra was upregulated in tumor and spleen tissues of the CCR5−/− mice (Figure 4D-G)."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7187","span":{"begin":766,"end":777},"obj":"Positive_regulation"},{"id":"T7186","span":{"begin":741,"end":751},"obj":"Gene_expression"},{"id":"T7185","span":{"begin":755,"end":761},"obj":"Protein"},{"id":"T7184","span":{"begin":617,"end":625},"obj":"Positive_regulation"},{"id":"T7183","span":{"begin":631,"end":641},"obj":"Gene_expression"},{"id":"T7182","span":{"begin":617,"end":625},"obj":"Positive_regulation"},{"id":"T7181","span":{"begin":645,"end":651},"obj":"Protein"},{"id":"T7180","span":{"begin":577,"end":583},"obj":"Protein"},{"id":"T7179","span":{"begin":262,"end":271},"obj":"Positive_regulation"},{"id":"T7178","span":{"begin":262,"end":271},"obj":"Positive_regulation"},{"id":"T7177","span":{"begin":262,"end":271},"obj":"Positive_regulation"},{"id":"T7176","span":{"begin":339,"end":343},"obj":"Protein"},{"id":"T7175","span":{"begin":255,"end":261},"obj":"Protein"},{"id":"T7174","span":{"begin":250,"end":253},"obj":"Protein"},{"id":"T7173","span":{"begin":242,"end":248},"obj":"Protein"},{"id":"T7172","span":{"begin":97,"end":101},"obj":"Protein"}],"relations":[{"id":"R4892","pred":"themeOf","subj":"T7173","obj":"T7177"},{"id":"R4893","pred":"themeOf","subj":"T7174","obj":"T7178"},{"id":"R4894","pred":"themeOf","subj":"T7175","obj":"T7179"},{"id":"R4895","pred":"themeOf","subj":"T7180","obj":"T7182"},{"id":"R4896","pred":"themeOf","subj":"T7181","obj":"T7183"},{"id":"R4897","pred":"themeOf","subj":"T7183","obj":"T7184"},{"id":"R4898","pred":"themeOf","subj":"T7185","obj":"T7186"},{"id":"R4899","pred":"themeOf","subj":"T7186","obj":"T7187"}],"text":"To investigate the difference in the cytokine levels between the tumor and spleen tissues of the CCR5+/+ and CCR5−/− mice, we conducted a cytokine array assay using a Mouse Proteome Array (Figure 4A). Among 40 tested cytokines, the levels of IL-1Ra, MIG, MIP-1α increased about 686, 9 and 25-fold respectively, in CCR5−/− mice compared to CCR5+/+ mice. Using this technique, no other cytokines were found to be different between the CCR5−/− mice and the CCR5+/+ mice (Figure 4B). Similar altered cytokine levels were found in the spleens of CCR5−/− mice (Figure 4C). Since the IL-1Ra level was the most significantly elevated, the expression of IL-1Ra in tumor and spleen tissues was analyzed by immunofluorescence and western blotting. The expression of IL-1Ra was upregulated in tumor and spleen tissues of the CCR5−/− mice (Figure 4D-G)."}