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PMC:3342329 / 1358-1662 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T110 283-293 Negative_regulation denotes inhibition
T109 219-223 Protein denotes CCR5
T108 168-172 Protein denotes CCR5
T107 135-139 Protein denotes CCR5
T79 219-223 Protein denotes CCR5
T78 168-172 Protein denotes CCR5
T77 135-139 Protein denotes CCR5

testone

Id Subject Object Predicate Lexical cue
T41 135-139 Protein denotes CCR5
T57 283-293 Negative_regulation denotes inhibition
T56 224-234 Negative_regulation denotes deficiency
T43 219-223 Protein denotes CCR5
T42 168-172 Protein denotes CCR5
R9 T43 T56 themeOf CCR5,deficiency

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T646 224-234 Negative_regulation denotes deficiency
T635 219-223 Protein denotes CCR5
T634 168-172 Protein denotes CCR5
T633 135-139 Protein denotes CCR5
R347 T635 T646 themeOf CCR5,deficiency

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T772 224-234 Negative_regulation denotes deficiency
T761 219-223 Protein denotes CCR5
T760 168-172 Protein denotes CCR5
T759 135-139 Protein denotes CCR5
R416 T761 T772 themeOf CCR5,deficiency

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T526 297-302 NN denotes NF-κB
T525 294-296 IN denotes of
T524 283-293 NN denotes inhibition
T523 275-282 IN denotes through
T522 266-274 NN denotes melanoma
T521 263-265 IN denotes of
T520 257-262 NN denotes death
T519 252-256 NN denotes cell
T518 242-251 JJ denotes apoptotic
T517 235-241 VB denotes caused
T516 224-234 NN denotes deficiency
T515 219-223 NN denotes CCR5
T514 214-218 IN denotes that
T513 207-213 VB denotes showed
T512 199-206 NN denotes results
T511 193-198 DT denotes these
T510 191-192 -COMMA- denotes ,
T509 182-191 RB denotes Therefore
T508 176-180 NN denotes mice
T507 168-175 JJ denotes CCR5+/+
T506 165-167 IN denotes of
T505 160-164 DT denotes that
T504 157-159 TO denotes to
T503 148-156 VB denotes compared
T502 143-147 NN denotes mice
T501 135-142 NN denotes CCR5−/−
T500 132-134 IN denotes of
T499 125-131 NN denotes tissue
T498 118-124 NN denotes spleen
T497 114-117 CC denotes and
T496 108-113 NN denotes tumor
T495 99-107 NN denotes melanoma
T494 96-98 IN denotes in
T493 86-95 VB denotes increased
T492 72-85 RB denotes significantly
T491 68-71 VB denotes was
T490 62-67 NN denotes cells
T489 55-61 NN denotes killer
T488 47-54 JJ denotes natural
T487 41-46 JJ denotes CD57+
T486 37-40 CC denotes and
T485 32-36 NN denotes cell
T484 30-31 NN denotes T
T483 20-29 JJ denotes cytotoxic
T482 15-19 JJ denotes CD8+
T481 12-14 IN denotes of
R263 T485 T482 arg1Of cell,CD8+
R264 T485 T483 arg1Of cell,cytotoxic
R265 T485 T484 arg1Of cell,T
R266 T485 T486 arg1Of cell,and
R267 T486 T481 arg2Of and,of
R268 T490 T486 arg2Of cells,and
R269 T490 T487 arg1Of cells,CD57+
R270 T490 T488 arg1Of cells,natural
R271 T490 T489 arg1Of cells,killer
R274 T493 T491 arg2Of increased,was
R275 T493 T492 arg1Of increased,significantly
R276 T493 T494 arg1Of increased,in
R277 T496 T497 arg1Of tumor,and
R278 T498 T497 arg2Of spleen,and
R279 T499 T494 arg2Of tissue,in
R280 T499 T495 arg1Of tissue,melanoma
R281 T499 T496 arg1Of tissue,tumor
R282 T499 T498 arg1Of tissue,spleen
R283 T499 T500 arg1Of tissue,of
R284 T502 T500 arg2Of mice,of
R285 T502 T501 arg1Of mice,CCR5−/−
R286 T502 T503 arg2Of mice,compared
R287 T503 T504 arg1Of compared,to
R288 T505 T504 arg2Of that,to
R289 T505 T506 arg1Of that,of
R290 T508 T506 arg2Of mice,of
R291 T508 T507 arg1Of mice,CCR5+/+
R292 T512 T511 arg1Of results,these
R293 T512 T513 arg1Of results,showed
R294 T513 T509 arg1Of showed,Therefore
R295 T513 T510 arg1Of showed,","
R296 T516 T515 arg1Of deficiency,CCR5
R297 T516 T517 arg1Of deficiency,caused
R298 T517 T513 arg2Of caused,showed
R299 T517 T514 arg1Of caused,that
R300 T517 T523 arg1Of caused,through
R301 T520 T517 arg2Of death,caused
R302 T520 T518 arg1Of death,apoptotic
R303 T520 T519 arg1Of death,cell
R304 T520 T521 arg1Of death,of
R305 T522 T521 arg2Of melanoma,of
R306 T524 T523 arg2Of inhibition,through
R307 T524 T525 arg1Of inhibition,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T185 219-223 Protein denotes CCR5
T184 168-172 Protein denotes CCR5
T183 135-139 Protein denotes CCR5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T554 15-18 http://www.uniprot.org/uniprot/P10966 denotes CD8
T553 15-18 http://www.uniprot.org/uniprot/P01732 denotes CD8
T547 219-223 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T546 168-172 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T545 135-139 http://www.uniprot.org/uniprot/P51681 denotes CCR5

UBERON-AE

Id Subject Object Predicate Lexical cue
T119 118-124 http://purl.obolibrary.org/obo/UBERON_0002106 denotes spleen
T117 125-131 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GO-BP

Id Subject Object Predicate Lexical cue
T209 257-262 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T208 252-262 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T199 242-262 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptotic cell death

GO-CC

Id Subject Object Predicate Lexical cue
T211 32-36 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T212 252-256 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

simple1

Id Subject Object Predicate Lexical cue
T258 219-223 Protein denotes CCR5
T257 168-172 Protein denotes CCR5
T256 135-139 Protein denotes CCR5

DLUT931

Id Subject Object Predicate Lexical cue
T587 283-293 Negative_regulation denotes inhibition
T585 224-234 Negative_regulation denotes deficiency
T575 219-223 Protein denotes CCR5
T574 168-172 Protein denotes CCR5
T573 135-139 Protein denotes CCR5
R322 T575 T585 themeOf CCR5,deficiency
R328 T585 T587 causeOf deficiency,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T803 176-180 Protein denotes mice
T789 168-172 Protein denotes CCR5
T788 297-302 Protein denotes NF-κB
T785 143-147 Protein denotes mice
T783 41-67 Entity denotes CD57+ natural killer cells
T781 219-234 Protein denotes CCR5 deficiency
T776 15-36 Entity denotes CD8+ cytotoxic T cell

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1130 297-302 NNP denotes NF-κB
T1129 294-296 IN denotes of
T1128 283-293 NN denotes inhibition
T1127 275-282 IN denotes through
T1126 266-274 NN denotes melanoma
T1125 263-265 IN denotes of
T1124 257-262 NN denotes death
T1123 252-256 NN denotes cell
T1122 242-251 JJ denotes apoptotic
T1121 235-241 VBD denotes caused
T1120 224-234 NN denotes deficiency
T1119 219-223 CD denotes CCR5
T1118 214-218 IN denotes that
T1117 207-213 VBD denotes showed
T1116 199-206 NNS denotes results
T1115 193-198 DT denotes these
T1114 191-192 , denotes ,
T1113 182-191 RB denotes Therefore
T1112 180-181 . denotes .
T1111 176-180 NNS denotes mice
T1110 174-175 NN denotes +
T1109 173-174 NN denotes /
T1108 172-173 CD denotes +
T1107 168-172 CD denotes CCR5
T1106 165-167 IN denotes of
T1105 160-164 DT denotes that
T1104 157-159 TO denotes to
T1103 148-156 VBN denotes compared
T1102 143-147 NNS denotes mice
T1101 141-142 NN denotes −
T1100 140-141 NN denotes /
T1099 139-140 CD denotes −
T1098 135-139 CD denotes CCR5
T1097 132-134 IN denotes of
T1096 125-131 NN denotes tissue
T1095 118-124 NN denotes spleen
T1094 114-117 CC denotes and
T1093 108-113 NN denotes tumor
T1092 99-107 NN denotes melanoma
T1091 96-98 IN denotes in
T1090 86-95 VBN denotes increased
T1089 72-85 RB denotes significantly
T1088 68-71 VBD denotes was
T1087 62-67 NNS denotes cells
T1086 55-61 NN denotes killer
T1085 47-54 JJ denotes natural
T1084 45-46 VBP denotes +
T1083 41-45 NNP denotes CD57
T1082 37-40 CC denotes and
T1081 32-36 NN denotes cell
T1080 30-31 NNP denotes T
T1079 20-29 JJ denotes cytotoxic
T1078 18-19 CD denotes +
T1077 15-18 CD denotes CD8
T1076 12-14 IN denotes of
R628 T1130 T1129 pobj NF-κB,of
R683 T1077 T1081 nummod CD8,cell
R684 T1078 T1081 nummod +,cell
R685 T1079 T1081 amod cytotoxic,cell
R686 T1080 T1081 compound T,cell
R687 T1081 T1076 pobj cell,of
R688 T1082 T1081 cc and,cell
R689 T1083 T1084 nmod CD57,+
R690 T1084 T1090 mark +,increased
R691 T1085 T1087 amod natural,cells
R692 T1086 T1087 compound killer,cells
R693 T1087 T1090 nsubjpass cells,increased
R695 T1088 T1090 auxpass was,increased
R696 T1089 T1090 advmod significantly,increased
R697 T1090 T1090 ROOT increased,increased
R698 T1091 T1090 prep in,increased
R700 T1092 T1093 compound melanoma,tumor
R701 T1093 T1091 pobj tumor,in
R702 T1094 T1093 cc and,tumor
R704 T1095 T1096 compound spleen,tissue
R705 T1096 T1093 conj tissue,tumor
R706 T1097 T1096 prep of,tissue
R707 T1098 T1102 nummod CCR5,mice
R708 T1099 T1102 nummod −,mice
R709 T1100 T1102 compound /,mice
R711 T1101 T1102 compound −,mice
R712 T1102 T1097 pobj mice,of
R713 T1103 T1090 prep compared,increased
R714 T1104 T1103 prep to,compared
R716 T1105 T1104 pobj that,to
R717 T1106 T1105 prep of,that
R718 T1107 T1111 nummod CCR5,mice
R719 T1108 T1111 nummod +,mice
R720 T1109 T1111 compound /,mice
R721 T1110 T1111 compound +,mice
R722 T1111 T1106 pobj mice,of
R723 T1112 T1090 punct .,increased
R724 T1113 T1117 advmod Therefore,showed
R725 T1114 T1117 punct ",",showed
R726 T1115 T1116 det these,results
R727 T1116 T1117 nsubj results,showed
R728 T1117 T1117 ROOT showed,showed
R729 T1118 T1121 mark that,caused
R730 T1119 T1120 amod CCR5,deficiency
R731 T1120 T1121 nsubj deficiency,caused
R732 T1121 T1117 ccomp caused,showed
R733 T1122 T1124 amod apoptotic,death
R734 T1123 T1124 compound cell,death
R735 T1124 T1121 dobj death,caused
R736 T1125 T1124 prep of,death
R737 T1126 T1125 pobj melanoma,of
R738 T1127 T1121 prep through,caused
R739 T1128 T1127 pobj inhibition,through
R740 T1129 T1128 prep of,inhibition

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T693 283-293 Negative_regulation denotes inhibition
T691 283-293 Negative_regulation denotes inhibition
T690 224-234 Negative_regulation denotes deficiency
T688 297-302 Protein denotes NF-κB
T687 219-223 Protein denotes CCR5
T686 168-172 Protein denotes CCR5
T685 41-46 Protein denotes CD57+
T684 15-18 Protein denotes CD8
R371 T687 T690 themeOf CCR5,deficiency
R372 T688 T691 themeOf NF-κB,inhibition
R374 T690 T691 causeOf deficiency,inhibition
R375 T690 T693 causeOf deficiency,inhibition