PMC:3342329 / 1051-1205
Annnotations
test3
{"project":"test3","denotations":[{"id":"T104","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T103","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T102","span":{"begin":49,"end":58},"obj":"Negative_regulation"},{"id":"T101","span":{"begin":37,"end":43},"obj":"Protein"},{"id":"T74","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T73","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T72","span":{"begin":37,"end":43},"obj":"Protein"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
testone
{"project":"testone","denotations":[{"id":"T38","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T37","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T36","span":{"begin":37,"end":43},"obj":"Protein"},{"id":"T55","span":{"begin":49,"end":58},"obj":"Negative_regulation"},{"id":"T54","span":{"begin":3,"end":13},"obj":"Gene_expression"}],"relations":[{"id":"R7","pred":"themeOf","subj":"T36","obj":"T55"},{"id":"R8","pred":"themeOf","subj":"T36","obj":"T54"},{"id":"R13","pred":"themeOf","subj":"T54","obj":"T55"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T643","span":{"begin":49,"end":58},"obj":"Negative_regulation"},{"id":"T642","span":{"begin":3,"end":13},"obj":"Gene_expression"},{"id":"T630","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T629","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T628","span":{"begin":37,"end":43},"obj":"Protein"}],"relations":[{"id":"R344","pred":"themeOf","subj":"T628","obj":"T642"},{"id":"R345","pred":"themeOf","subj":"T628","obj":"T643"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T769","span":{"begin":3,"end":13},"obj":"Gene_expression"},{"id":"T768","span":{"begin":49,"end":58},"obj":"Negative_regulation"},{"id":"T756","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T755","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T754","span":{"begin":37,"end":43},"obj":"Protein"}],"relations":[{"id":"R413","pred":"themeOf","subj":"T754","obj":"T769"},{"id":"R414","pred":"themeOf","subj":"T754","obj":"T768"},{"id":"R418","pred":"themeOf","subj":"T769","obj":"T768"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T454","span":{"begin":150,"end":151},"obj":"DT"},{"id":"T453","span":{"begin":148,"end":149},"obj":"-COMMA-"},{"id":"T452","span":{"begin":142,"end":148},"obj":"NN"},{"id":"T451","span":{"begin":139,"end":141},"obj":"IN"},{"id":"T450","span":{"begin":133,"end":138},"obj":"NN"},{"id":"T449","span":{"begin":129,"end":132},"obj":"DT"},{"id":"T448","span":{"begin":124,"end":128},"obj":"IN"},{"id":"T447","span":{"begin":118,"end":123},"obj":"VB"},{"id":"T446","span":{"begin":115,"end":117},"obj":"PRP"},{"id":"T445","span":{"begin":113,"end":114},"obj":"-COMMA-"},{"id":"T444","span":{"begin":100,"end":113},"obj":"RB"},{"id":"T443","span":{"begin":94,"end":98},"obj":"NN"},{"id":"T442","span":{"begin":86,"end":93},"obj":"NN"},{"id":"T441","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T440","span":{"begin":75,"end":82},"obj":"NN"},{"id":"T439","span":{"begin":66,"end":74},"obj":"NN"},{"id":"T438","span":{"begin":62,"end":65},"obj":"DT"},{"id":"T437","span":{"begin":59,"end":61},"obj":"IN"},{"id":"T436","span":{"begin":49,"end":58},"obj":"VB"},{"id":"T435","span":{"begin":45,"end":48},"obj":"VB"},{"id":"T434","span":{"begin":43,"end":44},"obj":"-COMMA-"},{"id":"T433","span":{"begin":37,"end":43},"obj":"NN"},{"id":"T432","span":{"begin":35,"end":36},"obj":"-COMMA-"},{"id":"T431","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T430","span":{"begin":27,"end":29},"obj":"IN"},{"id":"T429","span":{"begin":22,"end":26},"obj":"JJ"},{"id":"T428","span":{"begin":20,"end":21},"obj":"-COMMA-"},{"id":"T427","span":{"begin":14,"end":20},"obj":"NN"},{"id":"T426","span":{"begin":3,"end":13},"obj":"NN"}],"relations":[{"id":"R207","pred":"arg1Of","subj":"T427","obj":"T426"},{"id":"R208","pred":"arg1Of","subj":"T427","obj":"T428"},{"id":"R209","pred":"arg1Of","subj":"T427","obj":"T430"},{"id":"R210","pred":"arg1Of","subj":"T427","obj":"T435"},{"id":"R211","pred":"arg2Of","subj":"T427","obj":"T436"},{"id":"R212","pred":"arg1Of","subj":"T430","obj":"T429"},{"id":"R213","pred":"arg2Of","subj":"T431","obj":"T430"},{"id":"R214","pred":"arg1Of","subj":"T431","obj":"T432"},{"id":"R215","pred":"arg2Of","subj":"T433","obj":"T432"},{"id":"R217","pred":"arg1Of","subj":"T436","obj":"T434"},{"id":"R218","pred":"arg2Of","subj":"T436","obj":"T435"},{"id":"R219","pred":"arg1Of","subj":"T436","obj":"T437"},{"id":"R220","pred":"arg2Of","subj":"T440","obj":"T437"},{"id":"R221","pred":"arg1Of","subj":"T440","obj":"T438"},{"id":"R222","pred":"arg1Of","subj":"T440","obj":"T439"},{"id":"R223","pred":"arg1Of","subj":"T440","obj":"T441"},{"id":"R224","pred":"arg2Of","subj":"T443","obj":"T441"},{"id":"R225","pred":"arg1Of","subj":"T443","obj":"T442"},{"id":"R226","pred":"arg1Of","subj":"T446","obj":"T447"},{"id":"R227","pred":"arg1Of","subj":"T447","obj":"T444"},{"id":"R228","pred":"arg1Of","subj":"T447","obj":"T445"},{"id":"R229","pred":"arg1Of","subj":"T450","obj":"T449"},{"id":"R230","pred":"arg1Of","subj":"T450","obj":"T451"},{"id":"R231","pred":"arg1Of","subj":"T450","obj":"T453"},{"id":"R234","pred":"arg2Of","subj":"T452","obj":"T451"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T180","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T179","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T178","span":{"begin":37,"end":43},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T552","span":{"begin":37,"end":43},"obj":"http://www.uniprot.org/uniprot/Q13490"},{"id":"T542","span":{"begin":86,"end":90},"obj":"http://www.uniprot.org/uniprot/P51681"},{"id":"T532","span":{"begin":142,"end":148},"obj":"http://www.uniprot.org/uniprot/P18510"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T115","span":{"begin":75,"end":82},"obj":"http://purl.obolibrary.org/obo/UBERON_0000479"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
simple1
{"project":"simple1","denotations":[{"id":"T253","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T252","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T251","span":{"begin":37,"end":43},"obj":"Protein"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T583","span":{"begin":49,"end":58},"obj":"Negative_regulation"},{"id":"T582","span":{"begin":3,"end":13},"obj":"Gene_expression"},{"id":"T570","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T569","span":{"begin":86,"end":90},"obj":"Protein"},{"id":"T568","span":{"begin":37,"end":43},"obj":"Protein"}],"relations":[{"id":"R320","pred":"themeOf","subj":"T568","obj":"T582"},{"id":"R326","pred":"themeOf","subj":"T582","obj":"T583"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T812","span":{"begin":94,"end":98},"obj":"Protein"},{"id":"T811","span":{"begin":30,"end":35},"obj":"Protein"},{"id":"T806","span":{"begin":37,"end":44},"obj":"Protein"},{"id":"T798","span":{"begin":142,"end":149},"obj":"Protein"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1042","span":{"begin":150,"end":151},"obj":"DT"},{"id":"T1041","span":{"begin":148,"end":149},"obj":","},{"id":"T1040","span":{"begin":142,"end":148},"obj":"NN"},{"id":"T1039","span":{"begin":139,"end":141},"obj":"IN"},{"id":"T1038","span":{"begin":133,"end":138},"obj":"NN"},{"id":"T1037","span":{"begin":129,"end":132},"obj":"DT"},{"id":"T1036","span":{"begin":124,"end":128},"obj":"IN"},{"id":"T1035","span":{"begin":118,"end":123},"obj":"VBD"},{"id":"T1034","span":{"begin":115,"end":117},"obj":"PRP"},{"id":"T1033","span":{"begin":113,"end":114},"obj":","},{"id":"T1032","span":{"begin":100,"end":113},"obj":"RB"},{"id":"T1031","span":{"begin":98,"end":99},"obj":"."},{"id":"T1030","span":{"begin":94,"end":98},"obj":"NNS"},{"id":"T1029","span":{"begin":92,"end":93},"obj":"NN"},{"id":"T1028","span":{"begin":91,"end":92},"obj":"NN"},{"id":"T1027","span":{"begin":90,"end":91},"obj":"CD"},{"id":"T1026","span":{"begin":86,"end":90},"obj":"CD"},{"id":"T1025","span":{"begin":83,"end":85},"obj":"IN"},{"id":"T1024","span":{"begin":75,"end":82},"obj":"NNS"},{"id":"T1023","span":{"begin":66,"end":74},"obj":"NN"},{"id":"T1022","span":{"begin":62,"end":65},"obj":"DT"},{"id":"T1021","span":{"begin":59,"end":61},"obj":"IN"},{"id":"T1020","span":{"begin":49,"end":58},"obj":"VBN"},{"id":"T1019","span":{"begin":45,"end":48},"obj":"VBD"},{"id":"T1018","span":{"begin":43,"end":44},"obj":","},{"id":"T1017","span":{"begin":37,"end":43},"obj":"NNP"},{"id":"T1016","span":{"begin":35,"end":36},"obj":","},{"id":"T1015","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T1014","span":{"begin":27,"end":29},"obj":"IN"},{"id":"T1013","span":{"begin":22,"end":26},"obj":"JJ"},{"id":"T1012","span":{"begin":20,"end":21},"obj":","},{"id":"T1011","span":{"begin":14,"end":20},"obj":"NNS"},{"id":"T1010","span":{"begin":3,"end":13},"obj":"NN"}],"relations":[{"id":"R615","pred":"compound","subj":"T1010","obj":"T1011"},{"id":"R616","pred":"nsubjpass","subj":"T1011","obj":"T1020"},{"id":"R617","pred":"punct","subj":"T1012","obj":"T1011"},{"id":"R618","pred":"amod","subj":"T1013","obj":"T1014"},{"id":"R619","pred":"prep","subj":"T1014","obj":"T1011"},{"id":"R620","pred":"pobj","subj":"T1015","obj":"T1014"},{"id":"R621","pred":"punct","subj":"T1016","obj":"T1015"},{"id":"R622","pred":"conj","subj":"T1017","obj":"T1015"},{"id":"R623","pred":"punct","subj":"T1018","obj":"T1020"},{"id":"R624","pred":"auxpass","subj":"T1019","obj":"T1020"},{"id":"R626","pred":"prep","subj":"T1021","obj":"T1020"},{"id":"R627","pred":"det","subj":"T1022","obj":"T1024"},{"id":"R629","pred":"compound","subj":"T1023","obj":"T1024"},{"id":"R630","pred":"pobj","subj":"T1024","obj":"T1021"},{"id":"R631","pred":"prep","subj":"T1025","obj":"T1024"},{"id":"R632","pred":"nummod","subj":"T1026","obj":"T1030"},{"id":"R633","pred":"nummod","subj":"T1027","obj":"T1030"},{"id":"R634","pred":"nmod","subj":"T1028","obj":"T1030"},{"id":"R635","pred":"compound","subj":"T1029","obj":"T1030"},{"id":"R636","pred":"pobj","subj":"T1030","obj":"T1025"},{"id":"R638","pred":"advmod","subj":"T1032","obj":"T1035"},{"id":"R639","pred":"punct","subj":"T1033","obj":"T1035"},{"id":"R640","pred":"nsubj","subj":"T1034","obj":"T1035"},{"id":"R641","pred":"ROOT","subj":"T1035","obj":"T1035"},{"id":"R643","pred":"det","subj":"T1037","obj":"T1038"},{"id":"R645","pred":"prep","subj":"T1039","obj":"T1038"},{"id":"R646","pred":"pobj","subj":"T1040","obj":"T1039"},{"id":"R647","pred":"punct","subj":"T1041","obj":"T1040"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T681","span":{"begin":142,"end":148},"obj":"Protein"},{"id":"T680","span":{"begin":49,"end":58},"obj":"Negative_regulation"},{"id":"T679","span":{"begin":3,"end":13},"obj":"Gene_expression"},{"id":"T674","span":{"begin":30,"end":43},"obj":"Protein"}],"relations":[{"id":"R366","pred":"themeOf","subj":"T674","obj":"T679"},{"id":"R369","pred":"themeOf","subj":"T679","obj":"T680"}],"text":"in expression levels, such as Bcl-2, C-IAP1, was decreased in the melanoma tissues of CCR5−/− mice. Interestingly, we found that the level of IL-1Ra, a tu"}