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PMC:3342329 / 1051-1205 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T104 142-148 Protein denotes IL-1Ra
T103 86-90 Protein denotes CCR5
T102 49-58 Negative_regulation denotes decreased
T101 37-43 Protein denotes C-IAP1
T74 142-148 Protein denotes IL-1Ra
T73 86-90 Protein denotes CCR5
T72 37-43 Protein denotes C-IAP1

testone

Id Subject Object Predicate Lexical cue
T38 142-148 Protein denotes IL-1Ra
T37 86-90 Protein denotes CCR5
T36 37-43 Protein denotes C-IAP1
T55 49-58 Negative_regulation denotes decreased
T54 3-13 Gene_expression denotes expression
R7 T36 T55 themeOf C-IAP1,decreased
R8 T36 T54 themeOf C-IAP1,expression
R13 T54 T55 themeOf expression,decreased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T643 49-58 Negative_regulation denotes decreased
T642 3-13 Gene_expression denotes expression
T630 142-148 Protein denotes IL-1Ra
T629 86-90 Protein denotes CCR5
T628 37-43 Protein denotes C-IAP1
R344 T628 T642 themeOf C-IAP1,expression
R345 T628 T643 themeOf C-IAP1,decreased

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T769 3-13 Gene_expression denotes expression
T768 49-58 Negative_regulation denotes decreased
T756 142-148 Protein denotes IL-1Ra
T755 86-90 Protein denotes CCR5
T754 37-43 Protein denotes C-IAP1
R413 T754 T769 themeOf C-IAP1,expression
R414 T754 T768 themeOf C-IAP1,decreased
R418 T769 T768 themeOf expression,decreased

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T454 150-151 DT denotes a
T453 148-149 -COMMA- denotes ,
T452 142-148 NN denotes IL-1Ra
T451 139-141 IN denotes of
T450 133-138 NN denotes level
T449 129-132 DT denotes the
T448 124-128 IN denotes that
T447 118-123 VB denotes found
T446 115-117 PRP denotes we
T445 113-114 -COMMA- denotes ,
T444 100-113 RB denotes Interestingly
T443 94-98 NN denotes mice
T442 86-93 NN denotes CCR5−/−
T441 83-85 IN denotes of
T440 75-82 NN denotes tissues
T439 66-74 NN denotes melanoma
T438 62-65 DT denotes the
T437 59-61 IN denotes in
T436 49-58 VB denotes decreased
T435 45-48 VB denotes was
T434 43-44 -COMMA- denotes ,
T433 37-43 NN denotes C-IAP1
T432 35-36 -COMMA- denotes ,
T431 30-35 NN denotes Bcl-2
T430 27-29 IN denotes as
T429 22-26 JJ denotes such
T428 20-21 -COMMA- denotes ,
T427 14-20 NN denotes levels
T426 3-13 NN denotes expression
R207 T427 T426 arg1Of levels,expression
R208 T427 T428 arg1Of levels,","
R209 T427 T430 arg1Of levels,as
R210 T427 T435 arg1Of levels,was
R211 T427 T436 arg2Of levels,decreased
R212 T430 T429 arg1Of as,such
R213 T431 T430 arg2Of Bcl-2,as
R214 T431 T432 arg1Of Bcl-2,","
R215 T433 T432 arg2Of C-IAP1,","
R217 T436 T434 arg1Of decreased,","
R218 T436 T435 arg2Of decreased,was
R219 T436 T437 arg1Of decreased,in
R220 T440 T437 arg2Of tissues,in
R221 T440 T438 arg1Of tissues,the
R222 T440 T439 arg1Of tissues,melanoma
R223 T440 T441 arg1Of tissues,of
R224 T443 T441 arg2Of mice,of
R225 T443 T442 arg1Of mice,CCR5−/−
R226 T446 T447 arg1Of we,found
R227 T447 T444 arg1Of found,Interestingly
R228 T447 T445 arg1Of found,","
R229 T450 T449 arg1Of level,the
R230 T450 T451 arg1Of level,of
R231 T450 T453 arg1Of level,","
R234 T452 T451 arg2Of IL-1Ra,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T180 142-148 Protein denotes IL-1Ra
T179 86-90 Protein denotes CCR5
T178 37-43 Protein denotes C-IAP1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T552 37-43 http://www.uniprot.org/uniprot/Q13490 denotes C-IAP1
T542 86-90 http://www.uniprot.org/uniprot/P51681 denotes CCR5
T532 142-148 http://www.uniprot.org/uniprot/P18510 denotes IL-1Ra

UBERON-AE

Id Subject Object Predicate Lexical cue
T115 75-82 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissues

simple1

Id Subject Object Predicate Lexical cue
T253 142-148 Protein denotes IL-1Ra
T252 86-90 Protein denotes CCR5
T251 37-43 Protein denotes C-IAP1

DLUT931

Id Subject Object Predicate Lexical cue
T583 49-58 Negative_regulation denotes decreased
T582 3-13 Gene_expression denotes expression
T570 142-148 Protein denotes IL-1Ra
T569 86-90 Protein denotes CCR5
T568 37-43 Protein denotes C-IAP1
R320 T568 T582 themeOf C-IAP1,expression
R326 T582 T583 themeOf expression,decreased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T812 94-98 Protein denotes mice
T811 30-35 Protein denotes Bcl-2
T806 37-44 Protein denotes C-IAP1,
T798 142-149 Protein denotes IL-1Ra,

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1042 150-151 DT denotes a
T1041 148-149 , denotes ,
T1040 142-148 NN denotes IL-1Ra
T1039 139-141 IN denotes of
T1038 133-138 NN denotes level
T1037 129-132 DT denotes the
T1036 124-128 IN denotes that
T1035 118-123 VBD denotes found
T1034 115-117 PRP denotes we
T1033 113-114 , denotes ,
T1032 100-113 RB denotes Interestingly
T1031 98-99 . denotes .
T1030 94-98 NNS denotes mice
T1029 92-93 NN denotes −
T1028 91-92 NN denotes /
T1027 90-91 CD denotes −
T1026 86-90 CD denotes CCR5
T1025 83-85 IN denotes of
T1024 75-82 NNS denotes tissues
T1023 66-74 NN denotes melanoma
T1022 62-65 DT denotes the
T1021 59-61 IN denotes in
T1020 49-58 VBN denotes decreased
T1019 45-48 VBD denotes was
T1018 43-44 , denotes ,
T1017 37-43 NNP denotes C-IAP1
T1016 35-36 , denotes ,
T1015 30-35 NN denotes Bcl-2
T1014 27-29 IN denotes as
T1013 22-26 JJ denotes such
T1012 20-21 , denotes ,
T1011 14-20 NNS denotes levels
T1010 3-13 NN denotes expression
R615 T1010 T1011 compound expression,levels
R616 T1011 T1020 nsubjpass levels,decreased
R617 T1012 T1011 punct ",",levels
R618 T1013 T1014 amod such,as
R619 T1014 T1011 prep as,levels
R620 T1015 T1014 pobj Bcl-2,as
R621 T1016 T1015 punct ",",Bcl-2
R622 T1017 T1015 conj C-IAP1,Bcl-2
R623 T1018 T1020 punct ",",decreased
R624 T1019 T1020 auxpass was,decreased
R626 T1021 T1020 prep in,decreased
R627 T1022 T1024 det the,tissues
R629 T1023 T1024 compound melanoma,tissues
R630 T1024 T1021 pobj tissues,in
R631 T1025 T1024 prep of,tissues
R632 T1026 T1030 nummod CCR5,mice
R633 T1027 T1030 nummod −,mice
R634 T1028 T1030 nmod /,mice
R635 T1029 T1030 compound −,mice
R636 T1030 T1025 pobj mice,of
R638 T1032 T1035 advmod Interestingly,found
R639 T1033 T1035 punct ",",found
R640 T1034 T1035 nsubj we,found
R641 T1035 T1035 ROOT found,found
R643 T1037 T1038 det the,level
R645 T1039 T1038 prep of,level
R646 T1040 T1039 pobj IL-1Ra,of
R647 T1041 T1040 punct ",",IL-1Ra

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T681 142-148 Protein denotes IL-1Ra
T680 49-58 Negative_regulation denotes decreased
T679 3-13 Gene_expression denotes expression
T674 30-43 Protein denotes Bcl-2, C-IAP1
R366 T674 T679 themeOf "Bcl-2, C-IAP1",expression
R369 T679 T680 themeOf expression,decreased