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PMC:3333881 / 7673-8119 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5116 16-33 JJ denotes post-transfection
T5117 33-34 -COMMA- denotes ,
T5118 35-40 NN denotes cells
T5119 41-45 VB denotes were
T5120 46-51 VB denotes lysed
T5121 52-54 IN denotes in
T5122 55-60 NN denotes lysis
T5123 61-67 NN denotes buffer
T5124 68-70 IN denotes of
T5125 71-75 NNP denotes Dual
T5126 76-81 NNP denotes Light
T5127 82-92 NNP denotes Luciferase
T5128 93-99 NNP denotes System
T5129 100-101 -LRB- denotes (
T5130 101-107 NNP denotes Tropix
T5131 107-108 -COMMA- denotes ,
T5132 109-116 NNP denotes Bedford
T5133 116-117 -COMMA- denotes ,
T5134 118-120 NNP denotes MA
T5135 120-121 -COMMA- denotes ,
T5136 122-125 NNP denotes USA
T5137 125-126 -RRB- denotes )
T5138 127-130 CC denotes and
T5139 131-134 DT denotes the
T5140 135-145 NN denotes luciferase
T5141 146-149 CC denotes and
T5142 150-165 NN denotes β-galactosidase
T5143 166-176 NN denotes activities
T5144 177-181 VB denotes were
T5145 182-191 VB denotes evaluated
T5146 192-194 IN denotes by
T5147 195-200 VB denotes using
T5148 201-205 NNP denotes Dual
T5149 206-211 NNP denotes Light
T5150 212-222 NNP denotes Luciferase
T5151 223-229 NNP denotes System
T5152 230-231 -LRB- denotes (
T5153 231-237 NN denotes Tropix
T5154 237-238 -RRB- denotes )
T5155 239-241 IN denotes in
T5156 242-243 DT denotes a
T5157 244-258 NN denotes bioluminometer
T5158 259-260 -LRB- denotes (
T5159 260-266 NNP denotes Turner
T5160 267-276 NNP denotes Biosystem
T5161 276-277 -COMMA- denotes ,
T5162 278-287 NNP denotes Sunnyvale
T5163 287-288 -COMMA- denotes ,
T5164 289-291 NNP denotes CA
T5165 291-292 -COMMA- denotes ,
T5166 293-296 NNP denotes USA
T5167 296-297 -RRB- denotes )
T5168 299-302 DT denotes The
T5169 303-308 NN denotes ratio
T5170 309-311 IN denotes of
T5171 312-319 NN denotes firefly
T5172 320-330 NN denotes luciferase
T5173 331-339 NN denotes activity
T5174 340-342 TO denotes to
T5175 343-358 NN denotes β-galactosidase
T5176 359-367 NN denotes activity
T5177 368-371 VB denotes was
T5178 372-381 VB denotes expressed
T5179 382-384 IN denotes as
T5180 385-393 JJ denotes relative
T5181 394-399 JJ denotes light
T5182 400-405 NN denotes units
T5682 408-411 NN denotes RNA
T5683 412-424 NN denotes interference
T5684 425-431 NN denotes Jurkat
T5685 432-434 CC denotes or
T5686 435-439 NN denotes U937
T5687 440-445 NN denotes cells
R4512 T5118 T5116 arg1Of cells,post-transfection
R4513 T5118 T5117 arg1Of cells,","
R4514 T5118 T5119 arg1Of cells,were
R4515 T5118 T5120 arg2Of cells,lysed
R4516 T5120 T5119 arg2Of lysed,were
R4517 T5120 T5121 arg1Of lysed,in
R4518 T5120 T5138 arg1Of lysed,and
R4519 T5123 T5121 arg2Of buffer,in
R4520 T5123 T5122 arg1Of buffer,lysis
R4521 T5123 T5124 arg1Of buffer,of
R4522 T5128 T5124 arg2Of System,of
R4523 T5128 T5125 arg1Of System,Dual
R4524 T5128 T5126 arg1Of System,Light
R4525 T5128 T5127 arg1Of System,Luciferase
R4526 T5128 T5129 arg1Of System,(
R4527 T5130 T5131 arg1Of Tropix,","
R4528 T5131 T5133 arg1Of ",",","
R4529 T5132 T5131 arg2Of Bedford,","
R4530 T5133 T5129 arg2Of ",",(
R4531 T5133 T5135 arg1Of ",",","
R4532 T5134 T5133 arg2Of MA,","
R4533 T5136 T5135 arg2Of USA,","
R4534 T5137 T5129 arg3Of ),(
R4535 T5140 T5141 arg1Of luciferase,and
R4536 T5142 T5141 arg2Of β-galactosidase,and
R4537 T5143 T5139 arg1Of activities,the
R4538 T5143 T5140 arg1Of activities,luciferase
R4539 T5143 T5142 arg1Of activities,β-galactosidase
R4540 T5143 T5144 arg1Of activities,were
R4541 T5143 T5145 arg2Of activities,evaluated
R4542 T5145 T5138 arg2Of evaluated,and
R4543 T5145 T5144 arg2Of evaluated,were
R4544 T5145 T5146 arg1Of evaluated,by
R4545 T5147 T5146 arg2Of using,by
R4546 T5147 T5155 arg1Of using,in
R4547 T5147 T5158 arg1Of using,(
R4548 T5151 T5147 arg2Of System,using
R4549 T5151 T5148 arg1Of System,Dual
R4550 T5151 T5149 arg1Of System,Light
R4551 T5151 T5150 arg1Of System,Luciferase
R4552 T5151 T5152 arg1Of System,(
R4553 T5153 T5152 arg2Of Tropix,(
R4554 T5154 T5152 arg3Of ),(
R4555 T5157 T5155 arg2Of bioluminometer,in
R4556 T5157 T5156 arg1Of bioluminometer,a
R4557 T5160 T5158 arg2Of Biosystem,(
R4558 T5160 T5159 arg1Of Biosystem,Turner
R4559 T5160 T5161 arg1Of Biosystem,","
R4560 T5160 T5165 arg1Of Biosystem,","
R4561 T5160 T5166 arg1Of Biosystem,USA
R4562 T5162 T5161 arg2Of Sunnyvale,","
R4563 T5162 T5163 arg1Of Sunnyvale,","
R4564 T5164 T5163 arg2Of CA,","
R4565 T5167 T5158 arg3Of ),(
R4566 T5169 T5168 arg1Of ratio,The
R4567 T5169 T5170 arg1Of ratio,of
R4568 T5169 T5174 arg1Of ratio,to
R4569 T5169 T5177 arg1Of ratio,was
R4570 T5169 T5178 arg2Of ratio,expressed
R4571 T5173 T5170 arg2Of activity,of
R4572 T5173 T5171 arg1Of activity,firefly
R4573 T5173 T5172 arg1Of activity,luciferase
R4574 T5176 T5174 arg2Of activity,to
R4575 T5176 T5175 arg1Of activity,β-galactosidase
R4576 T5178 T5177 arg2Of expressed,was
R4577 T5178 T5179 arg1Of expressed,as
R4578 T5182 T5179 arg2Of units,as
R4579 T5182 T5180 arg1Of units,relative
R4580 T5182 T5181 arg1Of units,light
R4893 T5683 T5682 arg1Of interference,RNA
R4894 T5684 T5685 arg1Of Jurkat,or
R4895 T5686 T5685 arg2Of U937,or
R4896 T5687 T5684 arg1Of cells,Jurkat
R4897 T5687 T5686 arg1Of cells,U937

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5425 16-33 NN denotes post-transfection
T5426 33-34 , denotes ,
T5427 35-40 NNS denotes cells
T5428 41-45 VBD denotes were
T5429 46-51 VBN denotes lysed
T5430 52-54 IN denotes in
T5431 55-60 NN denotes lysis
T5432 61-67 NN denotes buffer
T5433 68-70 IN denotes of
T5434 71-75 NNP denotes Dual
T5435 76-81 NNP denotes Light
T5436 82-92 NNP denotes Luciferase
T5437 93-99 NNP denotes System
T5438 100-101 -LRB- denotes (
T5439 101-107 NNP denotes Tropix
T5440 107-108 , denotes ,
T5441 109-116 NNP denotes Bedford
T5442 116-117 , denotes ,
T5443 118-120 NNP denotes MA
T5444 120-121 , denotes ,
T5445 122-125 NNP denotes USA
T5446 125-126 -RRB- denotes )
T5447 127-130 CC denotes and
T5448 131-134 DT denotes the
T5449 135-145 NN denotes luciferase
T5450 146-149 CC denotes and
T5451 150-165 JJ denotes β-galactosidase
T5452 166-176 NNS denotes activities
T5453 177-181 VBD denotes were
T5454 182-191 VBN denotes evaluated
T5455 192-194 IN denotes by
T5456 195-200 VBG denotes using
T5457 201-205 NNP denotes Dual
T5458 206-211 NNP denotes Light
T5459 212-222 NNP denotes Luciferase
T5460 223-229 NNP denotes System
T5461 230-231 -LRB- denotes (
T5462 231-237 NNP denotes Tropix
T5463 237-238 -RRB- denotes )
T5464 239-241 IN denotes in
T5465 242-243 DT denotes a
T5466 244-258 NN denotes bioluminometer
T5467 259-260 -LRB- denotes (
T5468 260-266 NNP denotes Turner
T5469 267-276 NNP denotes Biosystem
T5470 276-277 , denotes ,
T5471 278-287 NNP denotes Sunnyvale
T5472 287-288 , denotes ,
T5473 289-291 NNP denotes CA
T5474 291-292 , denotes ,
T5475 293-296 NNP denotes USA
T5476 296-297 -RRB- denotes )
T5477 297-298 . denotes .
T5478 299-302 DT denotes The
T5479 303-308 NN denotes ratio
T5480 309-311 IN denotes of
T5481 312-319 RB denotes firefly
T5482 320-330 JJ denotes luciferase
T5483 331-339 NN denotes activity
T5484 340-342 TO denotes to
T5485 343-358 JJ denotes β-galactosidase
T5486 359-367 NN denotes activity
T5487 368-371 VBD denotes was
T5488 372-381 VBN denotes expressed
T5489 382-384 IN denotes as
T5490 385-393 JJ denotes relative
T5491 394-399 JJ denotes light
T5492 400-405 NNS denotes units
T5493 405-406 . denotes .
T5824 408-411 NNP denotes RNA
T5825 412-424 NN denotes interference
T5826 425-431 NNP denotes Jurkat
T5827 432-434 CC denotes or
T5828 435-439 NNP denotes U937
T5829 440-445 NNS denotes cells
R4807 T5425 T5429 intj post-transfection,lysed
R4808 T5426 T5429 punct ",",lysed
R4809 T5427 T5429 nsubjpass cells,lysed
R4810 T5428 T5429 auxpass were,lysed
R4811 T5429 T5429 ROOT lysed,lysed
R4812 T5430 T5429 prep in,lysed
R4813 T5431 T5432 compound lysis,buffer
R4814 T5432 T5430 pobj buffer,in
R4815 T5433 T5432 prep of,buffer
R4816 T5434 T5435 compound Dual,Light
R4817 T5435 T5437 compound Light,System
R4818 T5436 T5437 compound Luciferase,System
R4819 T5437 T5433 pobj System,of
R4820 T5438 T5437 punct (,System
R4821 T5439 T5437 appos Tropix,System
R4822 T5440 T5439 punct ",",Tropix
R4823 T5441 T5439 conj Bedford,Tropix
R4824 T5442 T5441 punct ",",Bedford
R4825 T5443 T5441 conj MA,Bedford
R4826 T5444 T5443 punct ",",MA
R4827 T5445 T5443 conj USA,MA
R4828 T5446 T5443 punct ),MA
R4829 T5447 T5437 cc and,System
R4830 T5448 T5449 det the,luciferase
R4831 T5449 T5452 nmod luciferase,activities
R4832 T5450 T5449 cc and,luciferase
R4833 T5451 T5449 conj β-galactosidase,luciferase
R4834 T5452 T5454 nsubjpass activities,evaluated
R4835 T5453 T5454 auxpass were,evaluated
R4836 T5454 T5429 conj evaluated,lysed
R4837 T5455 T5454 prep by,evaluated
R4838 T5456 T5455 pcomp using,by
R4839 T5457 T5458 compound Dual,Light
R4840 T5458 T5460 compound Light,System
R4841 T5459 T5460 compound Luciferase,System
R4842 T5460 T5456 dobj System,using
R4843 T5461 T5460 punct (,System
R4844 T5462 T5460 appos Tropix,System
R4845 T5463 T5460 punct ),System
R4846 T5464 T5456 prep in,using
R4847 T5465 T5466 det a,bioluminometer
R4848 T5466 T5464 pobj bioluminometer,in
R4849 T5467 T5469 punct (,Biosystem
R4850 T5468 T5469 compound Turner,Biosystem
R4851 T5469 T5454 npadvmod Biosystem,evaluated
R4852 T5470 T5469 punct ",",Biosystem
R4853 T5471 T5469 npadvmod Sunnyvale,Biosystem
R4854 T5472 T5471 punct ",",Sunnyvale
R4855 T5473 T5471 conj CA,Sunnyvale
R4856 T5474 T5473 punct ",",CA
R4857 T5475 T5473 conj USA,CA
R4858 T5476 T5473 punct ),CA
R4859 T5477 T5454 punct .,evaluated
R4860 T5478 T5479 det The,ratio
R4861 T5479 T5488 nsubjpass ratio,expressed
R4862 T5480 T5479 prep of,ratio
R4863 T5481 T5483 amod firefly,activity
R4864 T5482 T5483 amod luciferase,activity
R4865 T5483 T5480 pobj activity,of
R4866 T5484 T5483 prep to,activity
R4867 T5485 T5486 amod β-galactosidase,activity
R4868 T5486 T5484 pobj activity,to
R4869 T5487 T5488 auxpass was,expressed
R4870 T5488 T5488 ROOT expressed,expressed
R4871 T5489 T5488 prep as,expressed
R4872 T5490 T5492 amod relative,units
R4873 T5491 T5492 amod light,units
R4874 T5492 T5489 pobj units,as
R4875 T5493 T5488 punct .,expressed
R5028 T5824 T5825 compound RNA,interference
R5029 T5825 T5826 compound interference,Jurkat
R5030 T5826 T5829 nmod Jurkat,cells
R5031 T5827 T5826 cc or,Jurkat
R5032 T5828 T5826 conj U937,Jurkat

GO-BP

Id Subject Object Predicate Lexical cue
T5504 289-291 http://purl.obolibrary.org/obo/GO_0033968 denotes CA
T5508 55-60 http://purl.obolibrary.org/obo/GO_0019835 denotes lysis
T5510 150-176 http://purl.obolibrary.org/obo/GO_0004565 denotes β-galactosidase activities
T5511 331-358 http://purl.obolibrary.org/obo/GO_0004565 denotes activity to β-galactosidase
T5512 150-176 http://purl.obolibrary.org/obo/GO_0004336 denotes β-galactosidase activities
T5513 331-358 http://purl.obolibrary.org/obo/GO_0004336 denotes activity to β-galactosidase
T5514 150-176 http://purl.obolibrary.org/obo/GO_1903771 denotes β-galactosidase activities
T5515 331-358 http://purl.obolibrary.org/obo/GO_1903771 denotes activity to β-galactosidase
T5516 150-176 http://purl.obolibrary.org/obo/GO_1903770 denotes β-galactosidase activities
T5517 331-358 http://purl.obolibrary.org/obo/GO_1903770 denotes activity to β-galactosidase
T5518 150-176 http://purl.obolibrary.org/obo/GO_0033920 denotes β-galactosidase activities
T5519 331-358 http://purl.obolibrary.org/obo/GO_0033920 denotes activity to β-galactosidase
T5520 150-176 http://purl.obolibrary.org/obo/GO_0033929 denotes β-galactosidase activities
T5521 331-358 http://purl.obolibrary.org/obo/GO_0033929 denotes activity to β-galactosidase
T5522 150-176 http://purl.obolibrary.org/obo/GO_0033930 denotes β-galactosidase activities
T5523 331-358 http://purl.obolibrary.org/obo/GO_0033930 denotes activity to β-galactosidase
T5524 320-339 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity
T5525 320-339 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T5526 320-339 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T5527 320-339 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T5528 320-339 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity
T5972 408-424 http://purl.obolibrary.org/obo/GO_0016246 denotes RNA interference

GO-MF

Id Subject Object Predicate Lexical cue
T5530 289-291 http://purl.obolibrary.org/obo/GO_0033968 denotes CA
T5531 150-176 http://purl.obolibrary.org/obo/GO_0004565 denotes β-galactosidase activities
T5532 331-358 http://purl.obolibrary.org/obo/GO_0004565 denotes activity to β-galactosidase
T5533 150-176 http://purl.obolibrary.org/obo/GO_0004336 denotes β-galactosidase activities
T5534 331-358 http://purl.obolibrary.org/obo/GO_0004336 denotes activity to β-galactosidase
T5535 150-176 http://purl.obolibrary.org/obo/GO_0033920 denotes β-galactosidase activities
T5536 331-358 http://purl.obolibrary.org/obo/GO_0033920 denotes activity to β-galactosidase
T5537 150-176 http://purl.obolibrary.org/obo/GO_0033929 denotes β-galactosidase activities
T5538 331-358 http://purl.obolibrary.org/obo/GO_0033929 denotes activity to β-galactosidase
T5539 150-176 http://purl.obolibrary.org/obo/GO_0033930 denotes β-galactosidase activities
T5540 331-358 http://purl.obolibrary.org/obo/GO_0033930 denotes activity to β-galactosidase
T5541 320-339 http://purl.obolibrary.org/obo/GO_0045289 denotes luciferase activity
T5542 320-339 http://purl.obolibrary.org/obo/GO_0047077 denotes luciferase activity
T5543 320-339 http://purl.obolibrary.org/obo/GO_0047712 denotes luciferase activity
T5544 320-339 http://purl.obolibrary.org/obo/GO_0050248 denotes luciferase activity
T5545 320-339 http://purl.obolibrary.org/obo/GO_0050397 denotes luciferase activity

GO-CC

Id Subject Object Predicate Lexical cue
T5550 35-40 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5969 440-445 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T4914 299-406 Sentence denotes The ratio of firefly luciferase activity to β-galactosidase activity was expressed as relative light units.
T5677 408-424 Sentence denotes RNA interference
T49 299-406 Sentence denotes The ratio of firefly luciferase activity to β-galactosidase activity was expressed as relative light units.
T50 408-424 Sentence denotes RNA interference

events-check-again

Id Subject Object Predicate Lexical cue
T5631 82-92 Protein denotes Luciferase
T5632 135-145 Protein denotes luciferase
T5633 150-165 Protein denotes β-galactosidase
T5634 320-330 Protein denotes luciferase
T5635 343-358 Protein denotes β-galactosidase

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T5647 76-92 Protein denotes Light Luciferase
T5648 135-145 Protein denotes luciferase
T5649 150-165 Protein denotes β-galactosidase
T5650 206-222 Protein denotes Light Luciferase
T5651 320-330 Protein denotes luciferase
T5652 343-358 Protein denotes β-galactosidase

test2

Id Subject Object Predicate Lexical cue
T4884 82-92 Protein denotes Luciferase
T4885 135-145 Protein denotes luciferase
T4886 150-165 Protein denotes β-galactosidase
T4887 320-330 Protein denotes luciferase
T4888 343-358 Protein denotes β-galactosidase
T4889 372-381 Gene_expression denotes expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4901 82-92 Protein denotes Luciferase
T4902 135-145 Protein denotes luciferase
T4903 150-165 Protein denotes β-galactosidase
T4904 320-330 Protein denotes luciferase
T4905 343-358 Protein denotes β-galactosidase

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5194 82-92 P08659 denotes Luciferase
T5195 135-145 P08659 denotes luciferase
T5196 212-222 P08659 denotes Luciferase
T5197 320-330 P08659 denotes luciferase
T5198 385-393 Q04864 denotes relative