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PMC:3333881 / 5848-6560 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
22187158-17942396-77584437 229-231 17942396 denotes 50

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4413 0-8 NN denotes Plasmids
T4414 9-12 DT denotes The
T4415 13-21 NN denotes plasmids
T4416 22-38 NN denotes pcDNA-3xHA-IκB-α
T4417 38-39 -COMMA- denotes ,
T4418 40-55 NN denotes p3xFLAG-CMV-Tat
T4419 55-56 -COMMA- denotes ,
T4420 57-72 NN denotes p3xFLAG-CMV-Tat
T4421 73-74 NN denotes C
T4422 74-75 -LRB- denotes (
T4423 75-83 CD denotes 22,25,27
T4424 83-84 -RRB- denotes )
T4425 84-85 NN denotes A
T4426 85-86 -COMMA- denotes ,
T4427 87-102 NN denotes p3xFLAG-CMV-Tat
T4428 103-104 NN denotes R
T4429 104-105 -LRB- denotes (
T4430 105-122 CD denotes 49,52,53,55,56,57
T4431 122-123 -RRB- denotes )
T4432 123-124 NN denotes A
T4433 124-125 -COMMA- denotes ,
T4434 126-137 NN denotes pGEX-2T-Tat
T4435 137-138 -COMMA- denotes ,
T4436 139-150 NN denotes pGEX-2T-Tat
T4437 151-152 NN denotes C
T4438 152-153 -LRB- denotes (
T4439 153-161 CD denotes 22,25,27
T4440 161-162 -RRB- denotes )
T4441 162-163 NN denotes A
T4442 164-167 CC denotes and
T4443 168-179 NN denotes pGEX-2T-Tat
T4444 180-181 NN denotes R
T4445 181-182 -LRB- denotes (
T4446 182-199 CD denotes 49,52,53,55,56,57
T4447 199-200 -RRB- denotes )
T4448 200-201 NN denotes A
T4449 202-206 VB denotes were
T4450 207-217 RB denotes previously
T4451 218-227 VB denotes described
T4452 228-229 -LRB- denotes (
T4453 229-231 CD denotes 50
T4454 231-232 -RRB- denotes )
T4455 234-237 DT denotes The
T4456 238-246 NN denotes plasmids
T4457 247-262 NN denotes pNL4-3.Luc.R-E-
T4458 263-266 CC denotes and
T4459 267-276 NN denotes pHXB2-env
T4460 277-281 VB denotes were
T4461 282-290 VB denotes obtained
T4462 291-295 IN denotes from
T4463 296-299 DT denotes the
T4464 300-304 NNP denotes AIDS
T4465 305-313 NNP denotes Research
T4466 314-315 CC denotes &
T4467 316-325 NNP denotes Reference
T4468 326-333 NNP denotes Reagent
T4469 334-341 NNP denotes Program
T4470 341-342 -COMMA- denotes ,
T4471 343-351 NNP denotes Division
T4472 352-354 IN denotes of
T4473 355-359 NNP denotes AIDS
T4474 359-360 -COMMA- denotes ,
T4475 361-366 NNP denotes NIAID
T4476 366-367 -COMMA- denotes ,
T4477 368-371 NNP denotes NIH
T4478 371-372 -COMMA- denotes ,
T4479 373-376 NNP denotes USA
T4480 376-377 -COLON- denotes ;
T4481 378-384 NN denotes pκBluc
T4482 385-388 CC denotes and
T4483 389-398 NN denotes pSV-β-Gal
T4484 399-403 VB denotes were
T4485 404-413 VB denotes purchased
T4486 414-418 IN denotes from
T4487 419-426 NNP denotes Promega
T4488 427-428 -LRB- denotes (
T4489 428-435 NNP denotes Madison
T4490 435-436 -COMMA- denotes ,
T4491 437-439 NNP denotes WI
T4492 439-440 -COMMA- denotes ,
T4493 441-444 NNP denotes USA
T4494 444-445 -RRB- denotes )
T4495 447-450 DT denotes The
T4496 451-459 NN denotes plasmids
T4497 460-476 NN denotes pRc/CMV-3xHA-p65
T4498 476-477 -COMMA- denotes ,
T4499 478-496 NN denotes pRc/CMV-3xHA-p65ΔC
T4500 496-497 -LRB- denotes (
T4501 497-502 CD denotes 1–318
T4502 502-503 -RRB- denotes )
T4503 503-504 -COMMA- denotes ,
T4504 505-523 NN denotes pRc/CMV-3xHA-p65ΔN
T4505 523-524 -LRB- denotes (
T4506 524-531 CD denotes 122–551
T4507 531-532 -RRB- denotes )
T4508 532-533 -COMMA- denotes ,
T4509 534-549 NN denotes p3xFLAG-CMV-Tat
T4510 550-551 NN denotes T
T4511 551-552 -COMMA- denotes ,
T4512 552-553 NN denotes N
T4513 553-554 -LRB- denotes (
T4514 554-559 CD denotes 23,24
T4515 559-560 -RRB- denotes )
T4516 560-561 NN denotes A
T4517 561-562 -COMMA- denotes ,
T4518 563-578 NN denotes p3xFLAG-CMV-Tat
T4519 579-580 NN denotes K
T4520 580-581 -LRB- denotes (
T4521 581-586 CD denotes 50,51
T4522 586-587 -RRB- denotes )
T4523 587-588 NN denotes A
T4524 588-589 -COMMA- denotes ,
T4525 590-601 NN denotes pGEX-2T-Tat
T4526 602-603 NN denotes T
T4527 603-604 -COMMA- denotes ,
T4528 604-605 NN denotes N
T4529 605-606 -LRB- denotes (
T4530 606-611 CD denotes 23,24
T4531 611-612 -RRB- denotes )
T4532 612-613 NN denotes A
T4533 613-614 -COMMA- denotes ,
T4534 615-626 NN denotes pGEX-2T-Tat
T4535 627-628 NN denotes K
T4536 628-629 -LRB- denotes (
T4537 629-634 CD denotes 50,51
T4538 634-635 -RRB- denotes )
T4539 635-636 NN denotes A
T4540 637-640 CC denotes and
T4541 641-661 NN denotes pNL4-3.FLAG-Tat.R-E-
T4542 662-666 VB denotes were
T4543 667-676 VB denotes generated
T4544 677-679 IN denotes as
T4545 680-689 VB denotes described
T4546 690-692 IN denotes in
T4547 693-706 NNP denotes Supplementary
T4548 707-711 NNP denotes Data
R4014 T4416 T4417 arg1Of pcDNA-3xHA-IκB-α,","
R4015 T4417 T4419 arg1Of ",",","
R4016 T4418 T4417 arg2Of p3xFLAG-CMV-Tat,","
R4017 T4419 T4415 arg1Of ",",plasmids
R4018 T4419 T4426 arg1Of ",",","
R4019 T4423 T4422 arg2Of "22,25,27",(
R4020 T4424 T4422 arg3Of ),(
R4021 T4425 T4419 arg2Of A,","
R4022 T4425 T4420 arg1Of A,p3xFLAG-CMV-Tat
R4023 T4425 T4421 arg1Of A,C
R4024 T4425 T4422 arg1Of A,(
R4025 T4426 T4433 arg1Of ",",","
R4026 T4430 T4429 arg2Of "49,52,53,55,56,57",(
R4027 T4431 T4429 arg3Of ),(
R4028 T4432 T4426 arg2Of A,","
R4029 T4432 T4427 arg1Of A,p3xFLAG-CMV-Tat
R4030 T4432 T4428 arg1Of A,R
R4031 T4432 T4429 arg1Of A,(
R4032 T4433 T4435 arg1Of ",",","
R4033 T4434 T4433 arg2Of pGEX-2T-Tat,","
R4034 T4435 T4442 arg1Of ",",and
R4035 T4439 T4438 arg2Of "22,25,27",(
R4036 T4440 T4438 arg3Of ),(
R4037 T4441 T4435 arg2Of A,","
R4038 T4441 T4436 arg1Of A,pGEX-2T-Tat
R4039 T4441 T4437 arg1Of A,C
R4040 T4441 T4438 arg1Of A,(
R4041 T4442 T4414 arg1Of and,The
R4042 T4442 T4449 arg1Of and,were
R4043 T4442 T4451 arg2Of and,described
R4044 T4446 T4445 arg2Of "49,52,53,55,56,57",(
R4045 T4447 T4445 arg3Of ),(
R4046 T4448 T4442 arg2Of A,and
R4047 T4448 T4443 arg1Of A,pGEX-2T-Tat
R4048 T4448 T4444 arg1Of A,R
R4049 T4448 T4445 arg1Of A,(
R4050 T4451 T4449 arg2Of described,were
R4051 T4451 T4450 arg1Of described,previously
R4052 T4451 T4452 arg1Of described,(
R4053 T4453 T4452 arg2Of 50,(
R4054 T4454 T4452 arg3Of ),(
R4055 T4457 T4458 arg1Of pNL4-3.Luc.R-E-,and
R4056 T4458 T4455 arg1Of and,The
R4057 T4458 T4456 arg1Of and,plasmids
R4058 T4458 T4460 arg1Of and,were
R4059 T4458 T4461 arg2Of and,obtained
R4060 T4459 T4458 arg2Of pHXB2-env,and
R4061 T4461 T4460 arg2Of obtained,were
R4062 T4461 T4462 arg1Of obtained,from
R4063 T4461 T4480 arg1Of obtained,;
R4064 T4469 T4462 arg2Of Program,from
R4065 T4469 T4463 arg1Of Program,the
R4066 T4469 T4464 arg1Of Program,AIDS
R4067 T4469 T4465 arg1Of Program,Research
R4068 T4469 T4466 arg1Of Program,&
R4069 T4469 T4467 arg1Of Program,Reference
R4070 T4469 T4468 arg1Of Program,Reagent
R4071 T4469 T4470 arg1Of Program,","
R4072 T4469 T4478 arg1Of Program,","
R4073 T4471 T4470 arg2Of Division,","
R4074 T4471 T4472 arg1Of Division,of
R4075 T4473 T4474 arg1Of AIDS,","
R4076 T4474 T4476 arg1Of ",",","
R4077 T4475 T4474 arg2Of NIAID,","
R4078 T4476 T4472 arg2Of ",",of
R4079 T4477 T4476 arg2Of NIH,","
R4080 T4479 T4478 arg2Of USA,","
R4081 T4481 T4482 arg1Of pκBluc,and
R4082 T4482 T4484 arg1Of and,were
R4083 T4482 T4485 arg2Of and,purchased
R4084 T4483 T4482 arg2Of pSV-β-Gal,and
R4085 T4485 T4480 arg2Of purchased,;
R4086 T4485 T4484 arg2Of purchased,were
R4087 T4485 T4486 arg1Of purchased,from
R4088 T4487 T4486 arg2Of Promega,from
R4089 T4487 T4488 arg1Of Promega,(
R4090 T4489 T4490 arg1Of Madison,","
R4091 T4490 T4488 arg2Of ",",(
R4092 T4490 T4492 arg1Of ",",","
R4093 T4491 T4490 arg2Of WI,","
R4094 T4493 T4492 arg2Of USA,","
R4095 T4494 T4488 arg3Of ),(
R4096 T4497 T4498 arg1Of pRc/CMV-3xHA-p65,","
R4097 T4498 T4496 arg1Of ",",plasmids
R4098 T4498 T4503 arg1Of ",",","
R4099 T4499 T4498 arg2Of pRc/CMV-3xHA-p65ΔC,","
R4100 T4499 T4500 arg1Of pRc/CMV-3xHA-p65ΔC,(
R4101 T4501 T4500 arg2Of 1–318,(
R4102 T4502 T4500 arg3Of ),(
R4103 T4503 T4508 arg1Of ",",","
R4104 T4504 T4503 arg2Of pRc/CMV-3xHA-p65ΔN,","
R4105 T4504 T4505 arg1Of pRc/CMV-3xHA-p65ΔN,(
R4106 T4506 T4505 arg2Of 122–551,(
R4107 T4507 T4505 arg3Of ),(
R4108 T4508 T4511 arg1Of ",",","
R4109 T4510 T4508 arg2Of T,","
R4110 T4510 T4509 arg1Of T,p3xFLAG-CMV-Tat
R4111 T4511 T4517 arg1Of ",",","
R4112 T4514 T4513 arg2Of "23,24",(
R4113 T4515 T4513 arg3Of ),(
R4114 T4516 T4511 arg2Of A,","
R4115 T4516 T4512 arg1Of A,N
R4116 T4516 T4513 arg1Of A,(
R4117 T4517 T4495 arg1Of ",",The
R4118 T4517 T4542 arg1Of ",",were
R4119 T4517 T4543 arg2Of ",",generated
R4120 T4521 T4520 arg2Of "50,51",(
R4121 T4522 T4520 arg3Of ),(
R4122 T4523 T4518 arg1Of A,p3xFLAG-CMV-Tat
R4123 T4523 T4519 arg1Of A,K
R4124 T4523 T4520 arg1Of A,(
R4125 T4523 T4524 arg1Of A,","
R4126 T4524 T4527 arg1Of ",",","
R4127 T4526 T4524 arg2Of T,","
R4128 T4526 T4525 arg1Of T,pGEX-2T-Tat
R4129 T4527 T4533 arg1Of ",",","
R4130 T4530 T4529 arg2Of "23,24",(
R4131 T4531 T4529 arg3Of ),(
R4132 T4532 T4527 arg2Of A,","
R4133 T4532 T4528 arg1Of A,N
R4134 T4532 T4529 arg1Of A,(
R4135 T4533 T4540 arg1Of ",",and
R4136 T4537 T4536 arg2Of "50,51",(
R4137 T4538 T4536 arg3Of ),(
R4138 T4539 T4533 arg2Of A,","
R4139 T4539 T4534 arg1Of A,pGEX-2T-Tat
R4140 T4539 T4535 arg1Of A,K
R4141 T4539 T4536 arg1Of A,(
R4142 T4540 T4517 arg2Of and,","
R4143 T4541 T4540 arg2Of pNL4-3.FLAG-Tat.R-E-,and
R4144 T4543 T4542 arg2Of generated,were
R4145 T4543 T4544 arg1Of generated,as
R4146 T4545 T4544 arg2Of described,as
R4147 T4545 T4546 arg1Of described,in
R4148 T4548 T4546 arg2Of Data,in
R4149 T4548 T4547 arg1Of Data,Supplementary

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4596 0-8 NNP denotes Plasmids
T4597 9-12 DT denotes The
T4598 13-21 NNS denotes plasmids
T4599 22-38 NN denotes pcDNA-3xHA-IκB-α
T4600 38-39 , denotes ,
T4601 40-55 NN denotes p3xFLAG-CMV-Tat
T4602 55-56 , denotes ,
T4603 57-72 NN denotes p3xFLAG-CMV-Tat
T4604 73-74 NNP denotes C
T4605 74-75 -LRB- denotes (
T4606 75-83 CD denotes 22,25,27
T4607 83-84 -RRB- denotes )
T4608 84-85 DT denotes A
T4609 85-86 , denotes ,
T4610 87-102 JJ denotes p3xFLAG-CMV-Tat
T4611 103-104 NN denotes R
T4612 104-105 -LRB- denotes (
T4613 105-122 CD denotes 49,52,53,55,56,57
T4614 122-123 -RRB- denotes )
T4615 123-124 DT denotes A
T4616 124-125 , denotes ,
T4617 126-137 NN denotes pGEX-2T-Tat
T4618 137-138 , denotes ,
T4619 139-150 NN denotes pGEX-2T-Tat
T4620 151-152 NNP denotes C
T4621 152-153 -LRB- denotes (
T4622 153-161 CD denotes 22,25,27
T4623 161-162 -RRB- denotes )
T4624 162-163 DT denotes A
T4625 164-167 CC denotes and
T4626 168-179 JJ denotes pGEX-2T-Tat
T4627 180-181 NN denotes R
T4628 181-182 -LRB- denotes (
T4629 182-199 CD denotes 49,52,53,55,56,57
T4630 199-200 -RRB- denotes )
T4631 200-201 DT denotes A
T4632 202-206 VBD denotes were
T4633 207-217 RB denotes previously
T4634 218-227 VBN denotes described
T4635 228-229 -LRB- denotes (
T4636 229-231 CD denotes 50
T4637 231-232 -RRB- denotes )
T4638 232-233 . denotes .
T4639 234-237 DT denotes The
T4640 238-246 NNS denotes plasmids
T4641 247-253 JJ denotes pNL4-3
T4642 253-254 . denotes .
T4643 254-261 SYM denotes Luc.R-E
T4644 261-262 : denotes -
T4645 263-266 CC denotes and
T4646 267-276 JJ denotes pHXB2-env
T4647 277-281 VBD denotes were
T4648 282-290 VBN denotes obtained
T4649 291-295 IN denotes from
T4650 296-299 DT denotes the
T4651 300-304 NNP denotes AIDS
T4652 305-313 NNP denotes Research
T4653 314-315 CC denotes &
T4654 316-325 NNP denotes Reference
T4655 326-333 NNP denotes Reagent
T4656 334-341 NNP denotes Program
T4657 341-342 , denotes ,
T4658 343-351 NNP denotes Division
T4659 352-354 IN denotes of
T4660 355-359 NNP denotes AIDS
T4661 359-360 , denotes ,
T4662 361-366 NNP denotes NIAID
T4663 366-367 , denotes ,
T4664 368-371 NNP denotes NIH
T4665 371-372 , denotes ,
T4666 373-376 NNP denotes USA
T4667 376-377 : denotes ;
T4668 378-384 NNP denotes pκBluc
T4669 385-388 CC denotes and
T4670 389-398 JJ denotes pSV-β-Gal
T4671 399-403 VBD denotes were
T4672 404-413 VBN denotes purchased
T4673 414-418 IN denotes from
T4674 419-426 NNP denotes Promega
T4675 427-428 -LRB- denotes (
T4676 428-435 NNP denotes Madison
T4677 435-436 , denotes ,
T4678 437-439 NNP denotes WI
T4679 439-440 , denotes ,
T4680 441-444 NNP denotes USA
T4681 444-445 -RRB- denotes )
T4682 445-446 . denotes .
T4683 447-450 DT denotes The
T4684 451-459 NNS denotes plasmids
T4685 460-467 NNP denotes pRc/CMV
T4686 467-469 CD denotes -3
T4687 469-476 NNP denotes xHA-p65
T4688 476-477 , denotes ,
T4689 478-485 NNP denotes pRc/CMV
T4690 485-487 CD denotes -3
T4691 487-496 NN denotes xHA-p65ΔC
T4692 496-497 -LRB- denotes (
T4693 497-498 CD denotes 1
T4694 499-502 CD denotes 318
T4695 502-503 -RRB- denotes )
T4696 503-504 , denotes ,
T4697 505-512 NNP denotes pRc/CMV
T4698 512-514 CD denotes -3
T4699 514-523 NNP denotes xHA-p65ΔN
T4700 523-524 -LRB- denotes (
T4701 524-527 CD denotes 122
T4702 528-531 CD denotes 551
T4703 531-532 -RRB- denotes )
T4704 532-533 , denotes ,
T4705 534-549 JJ denotes p3xFLAG-CMV-Tat
T4706 550-551 NNP denotes T
T4707 551-552 , denotes ,
T4708 552-553 NNP denotes N
T4709 553-554 -LRB- denotes (
T4710 554-559 CD denotes 23,24
T4711 559-560 -RRB- denotes )
T4712 560-561 DT denotes A
T4713 561-562 , denotes ,
T4714 563-578 JJ denotes p3xFLAG-CMV-Tat
T4715 579-580 NNP denotes K
T4716 580-581 -LRB- denotes (
T4717 581-586 CD denotes 50,51
T4718 586-587 -RRB- denotes )
T4719 587-588 DT denotes A
T4720 588-589 , denotes ,
T4721 590-601 JJ denotes pGEX-2T-Tat
T4722 602-603 NNP denotes T
T4723 603-604 , denotes ,
T4724 604-605 NNP denotes N
T4725 605-606 -LRB- denotes (
T4726 606-611 CD denotes 23,24
T4727 611-612 -RRB- denotes )
T4728 612-613 DT denotes A
T4729 613-614 , denotes ,
T4730 615-626 JJ denotes pGEX-2T-Tat
T4731 627-628 NNP denotes K
T4732 628-629 -LRB- denotes (
T4733 629-634 CD denotes 50,51
T4734 634-635 -RRB- denotes )
T4735 635-636 DT denotes A
T4736 637-640 CC denotes and
T4737 641-647 JJ denotes pNL4-3
T4738 647-648 . denotes .
T4739 648-656 NN denotes FLAG-Tat
T4740 656-657 . denotes .
T4741 657-660 SYM denotes R-E
T4742 660-661 : denotes -
T4743 662-666 VBD denotes were
T4744 667-676 VBN denotes generated
T4745 677-679 IN denotes as
T4746 680-689 VBN denotes described
T4747 690-692 IN denotes in
T4748 693-706 NNP denotes Supplementary
T4749 707-711 NNP denotes Data
T4750 711-712 . denotes .
R4150 T4596 T4596 ROOT Plasmids,Plasmids
R4151 T4597 T4599 det The,pcDNA-3xHA-IκB-α
R4152 T4598 T4599 compound plasmids,pcDNA-3xHA-IκB-α
R4153 T4599 T4596 appos pcDNA-3xHA-IκB-α,Plasmids
R4154 T4600 T4599 punct ",",pcDNA-3xHA-IκB-α
R4155 T4601 T4599 conj p3xFLAG-CMV-Tat,pcDNA-3xHA-IκB-α
R4156 T4602 T4601 punct ",",p3xFLAG-CMV-Tat
R4157 T4603 T4604 compound p3xFLAG-CMV-Tat,C
R4158 T4604 T4599 appos C,pcDNA-3xHA-IκB-α
R4159 T4605 T4604 punct (,C
R4160 T4606 T4604 appos "22,25,27",C
R4161 T4607 T4604 punct ),C
R4162 T4608 T4604 appos A,C
R4163 T4609 T4611 punct ",",R
R4164 T4610 T4611 amod p3xFLAG-CMV-Tat,R
R4165 T4611 T4604 appos R,C
R4166 T4612 T4611 punct (,R
R4167 T4613 T4611 appos "49,52,53,55,56,57",R
R4168 T4614 T4611 punct ),R
R4169 T4615 T4620 det A,C
R4170 T4616 T4617 punct ",",pGEX-2T-Tat
R4171 T4617 T4620 nmod pGEX-2T-Tat,C
R4172 T4618 T4620 punct ",",C
R4173 T4619 T4620 compound pGEX-2T-Tat,C
R4174 T4620 T4620 ROOT C,C
R4175 T4621 T4620 punct (,C
R4176 T4622 T4620 appos "22,25,27",C
R4177 T4623 T4620 punct ),C
R4178 T4624 T4624 ROOT A,A
R4179 T4625 T4624 cc and,A
R4180 T4626 T4627 amod pGEX-2T-Tat,R
R4181 T4627 T4624 conj R,A
R4182 T4628 T4627 punct (,R
R4183 T4629 T4627 appos "49,52,53,55,56,57",R
R4184 T4630 T4627 punct ),R
R4185 T4631 T4634 nsubjpass A,described
R4186 T4632 T4634 auxpass were,described
R4187 T4633 T4634 advmod previously,described
R4188 T4634 T4634 ROOT described,described
R4189 T4635 T4634 punct (,described
R4190 T4636 T4634 npadvmod 50,described
R4191 T4637 T4634 punct ),described
R4192 T4638 T4634 punct .,described
R4193 T4639 T4641 det The,pNL4-3
R4194 T4640 T4641 compound plasmids,pNL4-3
R4195 T4641 T4648 nsubjpass pNL4-3,obtained
R4196 T4642 T4641 punct .,pNL4-3
R4197 T4643 T4648 punct Luc.R-E,obtained
R4198 T4644 T4643 punct -,Luc.R-E
R4199 T4645 T4643 cc and,Luc.R-E
R4200 T4646 T4643 conj pHXB2-env,Luc.R-E
R4201 T4647 T4648 auxpass were,obtained
R4202 T4648 T4672 ccomp obtained,purchased
R4203 T4649 T4648 prep from,obtained
R4204 T4650 T4656 det the,Program
R4205 T4651 T4652 compound AIDS,Research
R4206 T4652 T4656 nmod Research,Program
R4207 T4653 T4652 cc &,Research
R4208 T4654 T4652 conj Reference,Research
R4209 T4655 T4656 compound Reagent,Program
R4210 T4656 T4649 pobj Program,from
R4212 T4658 T4656 conj Division,Program
R4213 T4659 T4658 prep of,Division
R4214 T4660 T4659 pobj AIDS,of
R4215 T4661 T4658 punct ",",Division
R4216 T4662 T4658 conj NIAID,Division
R4217 T4663 T4662 punct ",",NIAID
R4224 T4670 T4668 conj pSV-β-Gal,pκBluc
R4225 T4671 T4672 auxpass were,purchased
R4226 T4672 T4672 ROOT purchased,purchased
R4227 T4673 T4672 prep from,purchased
R4228 T4674 T4673 pobj Promega,from
R4229 T4675 T4676 punct (,Madison
R4230 T4676 T4674 appos Madison,Promega
R4231 T4677 T4676 punct ",",Madison
R4232 T4678 T4676 conj WI,Madison
R4233 T4679 T4678 punct ",",WI
R4234 T4680 T4678 npadvmod USA,WI
R4235 T4681 T4678 punct ),WI
R4236 T4682 T4672 punct .,purchased
R4237 T4683 T4687 det The,xHA-p65
R4238 T4684 T4685 compound plasmids,pRc/CMV
R4239 T4685 T4687 nmod pRc/CMV,xHA-p65
R4240 T4686 T4687 nummod -3,xHA-p65
R4241 T4687 T4687 ROOT xHA-p65,xHA-p65
R4242 T4688 T4687 punct ",",xHA-p65
R4243 T4689 T4687 appos pRc/CMV,xHA-p65
R4244 T4690 T4691 nummod -3,xHA-p65ΔC
R4245 T4691 T4687 appos xHA-p65ΔC,xHA-p65
R4246 T4692 T4693 punct (,1
R4247 T4693 T4699 nummod 1,xHA-p65ΔN
R4248 T4694 T4693 appos 318,1
R4249 T4695 T4693 punct ),1
R4250 T4696 T4693 punct ",",1
R4251 T4697 T4699 nmod pRc/CMV,xHA-p65ΔN
R4252 T4698 T4699 nummod -3,xHA-p65ΔN
R4253 T4699 T4691 appos xHA-p65ΔN,xHA-p65ΔC
R4254 T4700 T4699 punct (,xHA-p65ΔN
R4255 T4701 T4699 parataxis 122,xHA-p65ΔN
R4256 T4702 T4701 prep 551,122
R4257 T4703 T4701 punct ),122
R4258 T4704 T4706 punct ",",T
R4259 T4705 T4706 compound p3xFLAG-CMV-Tat,T
R4260 T4706 T4699 conj T,xHA-p65ΔN
R4261 T4707 T4706 punct ",",T
R4262 T4708 T4706 npadvmod N,T
R4263 T4709 T4710 punct (,"23,24"
R4264 T4710 T4708 parataxis "23,24",N
R4265 T4711 T4710 punct ),"23,24"
R4266 T4712 T4715 det A,K
R4267 T4713 T4715 punct ",",K
R4268 T4714 T4715 compound p3xFLAG-CMV-Tat,K
R4269 T4715 T4715 ROOT K,K
R4270 T4716 T4715 punct (,K
R4271 T4717 T4715 appos "50,51",K
R4272 T4718 T4715 punct ),K
R4273 T4719 T4722 det A,T
R4274 T4720 T4722 punct ",",T
R4275 T4721 T4722 compound pGEX-2T-Tat,T
R4276 T4722 T4722 ROOT T,T
R4277 T4723 T4722 punct ",",T
R4278 T4724 T4722 conj N,T
R4279 T4725 T4724 punct (,N
R4280 T4726 T4724 appos "23,24",N
R4281 T4727 T4724 punct ),N
R4282 T4728 T4728 ROOT A,A
R4283 T4729 T4735 punct ",",A
R4284 T4730 T4731 amod pGEX-2T-Tat,K
R4285 T4731 T4735 nmod K,A
R4286 T4732 T4731 punct (,K
R4287 T4733 T4731 appos "50,51",K
R4288 T4734 T4735 punct ),A
R4289 T4735 T4728 det A,A
R4290 T4736 T4735 cc and,A
R4291 T4737 T4735 conj pNL4-3,A
R4292 T4738 T4737 punct .,pNL4-3
R4293 T4739 T4739 ROOT FLAG-Tat,FLAG-Tat
R4294 T4740 T4739 punct .,FLAG-Tat
R4295 T4741 T4744 nsubjpass R-E,generated
R4296 T4742 T4744 punct -,generated
R4297 T4743 T4744 auxpass were,generated
R4298 T4744 T4744 ROOT generated,generated
R4299 T4745 T4746 mark as,described
R4300 T4746 T4744 advcl described,generated
R4301 T4747 T4746 prep in,described
R4302 T4748 T4749 compound Supplementary,Data
R4303 T4749 T4747 pobj Data,in
R4304 T4750 T4744 punct .,generated
R4218 T4664 T4662 conj NIH,NIAID
R4219 T4665 T4662 punct ",",NIAID
R4220 T4666 T4662 conj USA,NIAID
R4221 T4667 T4672 punct ;,purchased
R4222 T4668 T4672 nsubjpass pκBluc,purchased
R4223 T4669 T4668 cc and,pκBluc
R4211 T4657 T4656 punct ",",Program

sentences

Id Subject Object Predicate Lexical cue
T4409 0-8 Sentence denotes Plasmids
T4410 9-233 Sentence denotes The plasmids pcDNA-3xHA-IκB-α, p3xFLAG-CMV-Tat, p3xFLAG-CMV-Tat C(22,25,27)A, p3xFLAG-CMV-Tat R(49,52,53,55,56,57)A, pGEX-2T-Tat, pGEX-2T-Tat C(22,25,27)A and pGEX-2T-Tat R(49,52,53,55,56,57)A were previously described (50).
T4411 234-446 Sentence denotes The plasmids pNL4-3.Luc.R-E- and pHXB2-env were obtained from the AIDS Research & Reference Reagent Program, Division of AIDS, NIAID, NIH, USA; pκBluc and pSV-β-Gal were purchased from Promega (Madison, WI, USA).
T4412 447-712 Sentence denotes The plasmids pRc/CMV-3xHA-p65, pRc/CMV-3xHA-p65ΔC(1–318), pRc/CMV-3xHA-p65ΔN(122–551), p3xFLAG-CMV-Tat T,N(23,24)A, p3xFLAG-CMV-Tat K(50,51)A, pGEX-2T-Tat T,N(23,24)A, pGEX-2T-Tat K(50,51)A and pNL4-3.FLAG-Tat.R-E- were generated as described in Supplementary Data.
T37 0-8 Sentence denotes Plasmids
T38 9-233 Sentence denotes The plasmids pcDNA-3xHA-IκB-α, p3xFLAG-CMV-Tat, p3xFLAG-CMV-Tat C(22,25,27)A, p3xFLAG-CMV-Tat R(49,52,53,55,56,57)A, pGEX-2T-Tat, pGEX-2T-Tat C(22,25,27)A and pGEX-2T-Tat R(49,52,53,55,56,57)A were previously described (50).
T39 234-446 Sentence denotes The plasmids pNL4-3.Luc.R-E- and pHXB2-env were obtained from the AIDS Research & Reference Reagent Program, Division of AIDS, NIAID, NIH, USA; pκBluc and pSV-β-Gal were purchased from Promega (Madison, WI, USA).
T40 447-712 Sentence denotes The plasmids pRc/CMV-3xHA-p65, pRc/CMV-3xHA-p65ΔC(1–318), pRc/CMV-3xHA-p65ΔN(122–551), p3xFLAG-CMV-Tat T,N(23,24)A, p3xFLAG-CMV-Tat K(50,51)A, pGEX-2T-Tat T,N(23,24)A, pGEX-2T-Tat K(50,51)A and pNL4-3.FLAG-Tat.R-E- were generated as described in Supplementary Data.

events-check-again

Id Subject Object Predicate Lexical cue
T4840 28-38 Protein denotes 3xHA-IκB-α
T4841 52-55 Protein denotes Tat
T4842 69-85 Protein denotes Tat C(22,25,27)A
T4843 99-124 Protein denotes Tat R(49,52,53,55,56,57)A
T4844 134-137 Protein denotes Tat
T4845 147-163 Protein denotes Tat C(22,25,27)A
T4846 176-201 Protein denotes Tat R(49,52,53,55,56,57)A
T4847 273-276 Protein denotes env
T4848 393-398 Protein denotes β-Gal
T4849 468-476 Protein denotes 3xHA-p65
T4850 486-496 Protein denotes 3xHA-p65ΔC
T4851 513-523 Protein denotes 3xHA-p65ΔN
T4852 546-561 Protein denotes Tat T,N(23,24)A
T4853 575-588 Protein denotes Tat K(50,51)A
T4854 598-613 Protein denotes Tat T,N(23,24)A
T4855 623-636 Protein denotes Tat K(50,51)A
T4856 653-656 Protein denotes Tat

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4857 13-38 Protein denotes plasmids pcDNA-3xHA-IκB-α
T4858 267-272 Protein denotes pHXB2
T4859 273-276 Protein denotes env
T4860 378-384 Protein denotes pκBluc

test2

Id Subject Object Predicate Lexical cue
T4375 28-38 Protein denotes 3xHA-IκB-α
T4376 52-55 Protein denotes Tat
T4377 69-85 Protein denotes Tat C(22,25,27)A
T4378 99-124 Protein denotes Tat R(49,52,53,55,56,57)A
T4379 134-137 Protein denotes Tat
T4380 147-163 Protein denotes Tat C(22,25,27)A
T4381 176-201 Protein denotes Tat R(49,52,53,55,56,57)A
T4382 273-276 Protein denotes env
T4383 393-398 Protein denotes β-Gal
T4384 468-476 Protein denotes 3xHA-p65
T4385 486-496 Protein denotes 3xHA-p65ΔC
T4386 513-523 Protein denotes 3xHA-p65ΔN
T4387 546-561 Protein denotes Tat T,N(23,24)A
T4388 575-588 Protein denotes Tat K(50,51)A
T4389 598-613 Protein denotes Tat T,N(23,24)A
T4390 623-636 Protein denotes Tat K(50,51)A
T4391 653-656 Protein denotes Tat

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T4392 28-38 Protein denotes 3xHA-IκB-α
T4393 52-55 Protein denotes Tat
T4394 69-85 Protein denotes Tat C(22,25,27)A
T4395 99-124 Protein denotes Tat R(49,52,53,55,56,57)A
T4396 134-137 Protein denotes Tat
T4397 147-163 Protein denotes Tat C(22,25,27)A
T4398 176-201 Protein denotes Tat R(49,52,53,55,56,57)A
T4399 273-276 Protein denotes env
T4400 393-398 Protein denotes β-Gal
T4401 468-476 Protein denotes 3xHA-p65
T4402 486-496 Protein denotes 3xHA-p65ΔC
T4403 513-523 Protein denotes 3xHA-p65ΔN
T4404 546-561 Protein denotes Tat T,N(23,24)A
T4405 575-588 Protein denotes Tat K(50,51)A
T4406 598-613 Protein denotes Tat T,N(23,24)A
T4407 623-636 Protein denotes Tat K(50,51)A
T4408 653-656 Protein denotes Tat

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T4549 52-55 P04605 denotes Tat
T4550 52-55 P04608 denotes Tat
T4551 52-55 P04610 denotes Tat
T4552 52-55 Q8UMQ1 denotes Tat
T4553 69-72 P04608 denotes Tat
T4554 69-72 P04605 denotes Tat
T4555 69-72 Q8UMQ1 denotes Tat
T4556 69-72 P04610 denotes Tat
T4557 99-102 P04608 denotes Tat
T4558 99-102 P04605 denotes Tat
T4559 99-102 P04610 denotes Tat
T4560 99-102 Q8UMQ1 denotes Tat
T4561 134-137 P04608 denotes Tat
T4562 134-137 P04605 denotes Tat
T4563 134-137 Q8UMQ1 denotes Tat
T4564 134-137 P04610 denotes Tat
T4565 147-150 P04608 denotes Tat
T4566 147-150 P04605 denotes Tat
T4567 147-150 Q8UMQ1 denotes Tat
T4568 147-150 P04610 denotes Tat
T4569 176-179 P04610 denotes Tat
T4570 176-179 P04608 denotes Tat
T4571 176-179 P04605 denotes Tat
T4572 176-179 Q8UMQ1 denotes Tat
T4573 273-276 P04578 denotes env
T4574 473-476 P21579 denotes p65
T4575 473-476 Q04206 denotes p65
T4576 546-549 Q8UMQ1 denotes Tat
T4577 546-549 P04610 denotes Tat
T4578 546-549 P04608 denotes Tat
T4579 546-549 P04605 denotes Tat
T4580 575-578 Q8UMQ1 denotes Tat
T4581 575-578 P04610 denotes Tat
T4582 575-578 P04608 denotes Tat
T4583 575-578 P04605 denotes Tat
T4584 598-601 Q8UMQ1 denotes Tat
T4585 598-601 P04610 denotes Tat
T4586 598-601 P04608 denotes Tat
T4587 598-601 P04605 denotes Tat
T4588 623-626 Q8UMQ1 denotes Tat
T4589 623-626 P04610 denotes Tat
T4590 623-626 P04608 denotes Tat
T4591 623-626 P04605 denotes Tat
T4592 653-656 Q8UMQ1 denotes Tat
T4593 653-656 P04610 denotes Tat
T4594 653-656 P04608 denotes Tat
T4595 653-656 P04605 denotes Tat