PMC:3333881 / 35871-38125
Annnotations
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28367 | 10-12 | IN | denotes | In |
| T28368 | 13-18 | JJ | denotes | HIV-1 |
| T28369 | 19-28 | NN | denotes | infection |
| T28370 | 29-32 | NNP | denotes | Tat |
| T28371 | 33-41 | VBZ | denotes | sustains |
| T28372 | 42-45 | DT | denotes | the |
| T28373 | 46-51 | JJ | denotes | NF-κB |
| T28374 | 52-60 | NN | denotes | activity |
| T28375 | 61-64 | CC | denotes | and |
| T28376 | 65-73 | VBZ | denotes | enhances |
| T28377 | 74-77 | DT | denotes | the |
| T28378 | 78-84 | JJ | denotes | MIP-1α |
| T28379 | 85-95 | NN | denotes | expression |
| T28380 | 96-99 | IN | denotes | via |
| T28381 | 100-111 | NN | denotes | interaction |
| T28382 | 112-116 | IN | denotes | with |
| T28383 | 117-122 | NNP | denotes | IκB-α |
| T28384 | 123-126 | CC | denotes | and |
| T28385 | 127-130 | NNS | denotes | p65 |
| T28386 | 130-131 | . | denotes | . |
| T28387 | 132-136 | CD | denotes | U937 |
| T28388 | 137-142 | NNS | denotes | cells |
| T28389 | 143-144 | -LRB- | denotes | ( |
| T28390 | 144-145 | CD | denotes | 5 |
| T28391 | 146-147 | RB | denotes | × |
| T28392 | 148-151 | CD | denotes | 107 |
| T28393 | 151-152 | -RRB- | denotes | ) |
| T28394 | 153-157 | VBD | denotes | were |
| T28395 | 158-169 | VBN | denotes | transfected |
| T28396 | 170-174 | IN | denotes | with |
| T28397 | 175-180 | NNP | denotes | siRNA |
| T28398 | 181-184 | NNP | denotes | Tat |
| T28399 | 184-185 | , | denotes | , |
| T28400 | 186-191 | NNP | denotes | siRNA |
| T28401 | 192-199 | NN | denotes | control |
| T28402 | 200-201 | -LRB- | denotes | ( |
| T28403 | 201-202 | CD | denotes | 2 |
| T28404 | 203-207 | NN | denotes | nmol |
| T28405 | 207-208 | -RRB- | denotes | ) |
| T28406 | 208-209 | , | denotes | , |
| T28407 | 210-212 | CC | denotes | or |
| T28408 | 213-217 | VBD | denotes | left |
| T28409 | 218-231 | JJ | denotes | untransfected |
| T28410 | 231-232 | : | denotes | ; |
| T28411 | 233-235 | CD | denotes | 24 |
| T28412 | 236-237 | NN | denotes | h |
| T28413 | 238-243 | RB | denotes | later |
| T28414 | 244-249 | NNS | denotes | cells |
| T28415 | 250-254 | VBD | denotes | were |
| T28416 | 255-263 | VBN | denotes | infected |
| T28417 | 264-268 | IN | denotes | with |
| T28418 | 269-285 | JJ | denotes | HXB2-pseudotyped |
| T28419 | 286-291 | NN | denotes | NL4-3 |
| T28420 | 291-292 | . | denotes | . |
| T28421 | 292-300 | NN | denotes | FLAG-Tat |
| T28422 | 300-301 | . | denotes | . |
| T28423 | 301-302 | NN | denotes | R |
| T28424 | 302-303 | NN | denotes | − |
| T28425 | 303-304 | NNP | denotes | E |
| T28426 | 304-305 | CD | denotes | − |
| T28427 | 306-313 | NNS | denotes | virions |
| T28428 | 314-315 | -LRB- | denotes | ( |
| T28429 | 315-318 | CD | denotes | 500 |
| T28430 | 319-321 | NN | denotes | ng |
| T28431 | 322-324 | IN | denotes | of |
| T28432 | 325-328 | CD | denotes | p24 |
| T28433 | 328-329 | -RRB- | denotes | ) |
| T28434 | 330-333 | CC | denotes | and |
| T28435 | 334-343 | VBD | denotes | harvested |
| T28436 | 344-346 | IN | denotes | at |
| T28437 | 347-350 | DT | denotes | the |
| T28438 | 351-360 | JJ | denotes | indicated |
| T28439 | 361-365 | NN | denotes | time |
| T28440 | 365-366 | . | denotes | . |
| T28441 | 367-368 | -LRB- | denotes | ( |
| T28442 | 368-369 | NNP | denotes | A |
| T28443 | 369-370 | -RRB- | denotes | ) |
| T28444 | 371-380 | JJ | denotes | Real-time |
| T28445 | 381-384 | NNP | denotes | PCR |
| T28446 | 385-387 | IN | denotes | of |
| T28447 | 388-393 | JJ | denotes | total |
| T28448 | 394-397 | NNP | denotes | RNA |
| T28449 | 398-406 | VBD | denotes | measured |
| T28450 | 407-410 | DT | denotes | the |
| T28451 | 411-414 | NNP | denotes | Tat |
| T28452 | 415-425 | NN | denotes | expression |
| T28453 | 425-426 | : | denotes | ; |
| T28454 | 427-432 | NNP | denotes | ELISA |
| T28455 | 433-441 | VBD | denotes | measured |
| T28456 | 442-445 | DT | denotes | the |
| T28457 | 446-452 | NN | denotes | amount |
| T28458 | 453-455 | IN | denotes | of |
| T28459 | 456-459 | CD | denotes | p24 |
| T28460 | 460-462 | IN | denotes | in |
| T28461 | 463-468 | JJ | denotes | whole |
| T28462 | 469-473 | NN | denotes | cell |
| T28463 | 474-482 | NNS | denotes | extracts |
| T28464 | 482-483 | . | denotes | . |
| T28465 | 484-485 | -LRB- | denotes | ( |
| T28466 | 485-486 | NNP | denotes | B |
| T28467 | 486-487 | -RRB- | denotes | ) |
| T28468 | 488-491 | DT | denotes | The |
| T28469 | 492-499 | JJ | denotes | binding |
| T28470 | 500-502 | IN | denotes | of |
| T28471 | 503-506 | CD | denotes | p65 |
| T28472 | 507-509 | TO | denotes | to |
| T28473 | 510-513 | DT | denotes | the |
| T28474 | 514-519 | NNP | denotes | NF-κB |
| T28475 | 520-535 | JJ | denotes | double-stranded |
| T28476 | 536-551 | NN | denotes | oligonucleotide |
| T28477 | 552-555 | VBD | denotes | was |
| T28478 | 556-564 | VBN | denotes | measured |
| T28479 | 565-567 | IN | denotes | in |
| T28480 | 568-575 | JJ | denotes | nuclear |
| T28481 | 576-584 | NNS | denotes | extracts |
| T28482 | 585-586 | -LRB- | denotes | ( |
| T28483 | 586-588 | CD | denotes | 10 |
| T28484 | 589-591 | NN | denotes | µg |
| T28485 | 591-592 | -RRB- | denotes | ) |
| T28486 | 593-598 | VBG | denotes | using |
| T28487 | 599-602 | DT | denotes | the |
| T28488 | 603-608 | NNP | denotes | NF-κB |
| T28489 | 609-622 | NNP | denotes | Transcription |
| T28490 | 623-629 | NNP | denotes | Factor |
| T28491 | 630-635 | NNP | denotes | ELISA |
| T28492 | 636-641 | NN | denotes | assay |
| T28493 | 642-645 | NN | denotes | kit |
| T28494 | 646-647 | -LRB- | denotes | ( |
| T28495 | 647-653 | NNP | denotes | Cayman |
| T28496 | 653-654 | -RRB- | denotes | ) |
| T28497 | 654-655 | . | denotes | . |
| T28498 | 656-657 | -LRB- | denotes | ( |
| T28499 | 657-658 | $ | denotes | C |
| T28500 | 658-659 | -RRB- | denotes | ) |
| T28501 | 660-663 | DT | denotes | The |
| T28502 | 664-669 | JJ | denotes | IκB-α |
| T28503 | 670-677 | NN | denotes | content |
| T28504 | 678-681 | VBD | denotes | was |
| T28505 | 682-690 | VBN | denotes | analysed |
| T28506 | 691-693 | IN | denotes | by |
| T28507 | 694-696 | CD | denotes | 12 |
| T28508 | 696-697 | NN | denotes | % |
| T28509 | 698-701 | NNP | denotes | SDS |
| T28510 | 702-706 | NNP | denotes | PAGE |
| T28511 | 707-710 | CC | denotes | and |
| T28512 | 711-718 | JJ | denotes | western |
| T28513 | 719-727 | VBG | denotes | blotting |
| T28514 | 728-730 | IN | denotes | of |
| T28515 | 731-740 | JJ | denotes | cytosolic |
| T28516 | 741-749 | NNS | denotes | extracts |
| T28517 | 750-751 | -LRB- | denotes | ( |
| T28518 | 751-753 | CD | denotes | 20 |
| T28519 | 754-756 | NN | denotes | µg |
| T28520 | 756-757 | -RRB- | denotes | ) |
| T28521 | 758-763 | VBG | denotes | using |
| T28522 | 764-774 | JJ | denotes | anti-IκB-α |
| T28523 | 775-783 | NN | denotes | antibody |
| T28524 | 783-784 | . | denotes | . |
| T28525 | 785-797 | NNP | denotes | Densitometry |
| T28526 | 798-804 | NNS | denotes | values |
| T28527 | 805-806 | -LRB- | denotes | ( |
| T28528 | 806-807 | NNP | denotes | D |
| T28529 | 807-808 | -RRB- | denotes | ) |
| T28530 | 809-811 | IN | denotes | of |
| T28531 | 812-815 | DT | denotes | the |
| T28532 | 816-821 | NNS | denotes | bands |
| T28533 | 822-826 | VBD | denotes | were |
| T28534 | 827-836 | VBN | denotes | expressed |
| T28535 | 837-839 | IN | denotes | as |
| T28536 | 840-844 | VBP | denotes | fold |
| T28537 | 845-853 | NN | denotes | increase |
| T28538 | 854-859 | IN | denotes | above |
| T28539 | 860-863 | DT | denotes | the |
| T28540 | 864-871 | NN | denotes | control |
| T28541 | 872-873 | -LRB- | denotes | ( |
| T28542 | 873-877 | JJ | denotes | mock |
| T28543 | 877-878 | -RRB- | denotes | ) |
| T28544 | 878-879 | . | denotes | . |
| T28545 | 880-881 | -LRB- | denotes | ( |
| T28546 | 881-882 | NNP | denotes | D |
| T28547 | 882-883 | -RRB- | denotes | ) |
| T28548 | 884-887 | NNP | denotes | IKK |
| T28549 | 888-896 | NN | denotes | activity |
| T28550 | 897-900 | VBD | denotes | was |
| T28551 | 901-909 | VBN | denotes | measured |
| T28552 | 910-912 | IN | denotes | in |
| T28553 | 913-922 | JJ | denotes | cytosolic |
| T28554 | 923-927 | NN | denotes | cell |
| T28555 | 928-936 | NNS | denotes | extracts |
| T28556 | 937-938 | -LRB- | denotes | ( |
| T28557 | 938-941 | CD | denotes | 100 |
| T28558 | 942-944 | NN | denotes | µg |
| T28559 | 944-945 | -RRB- | denotes | ) |
| T28560 | 946-951 | VBG | denotes | using |
| T28561 | 952-958 | NNP | denotes | HTScan |
| T28562 | 959-962 | NNP | denotes | IKK |
| T28563 | 963-969 | NNP | denotes | Kinase |
| T28564 | 970-975 | NNP | denotes | Assay |
| T28565 | 976-977 | -LRB- | denotes | ( |
| T28566 | 977-981 | NNP | denotes | Cell |
| T28567 | 982-991 | NNP | denotes | Signaling |
| T28568 | 992-1002 | NNP | denotes | Technology |
| T28569 | 1002-1003 | -RRB- | denotes | ) |
| T28570 | 1003-1004 | . | denotes | . |
| T28571 | 1005-1006 | -LRB- | denotes | ( |
| T28572 | 1006-1007 | NNP | denotes | E |
| T28573 | 1007-1008 | -RRB- | denotes | ) |
| T28574 | 1009-1013 | NNP | denotes | U937 |
| T28575 | 1014-1019 | NNS | denotes | cells |
| T28576 | 1020-1021 | -LRB- | denotes | ( |
| T28577 | 1021-1022 | CD | denotes | 5 |
| T28578 | 1023-1024 | RB | denotes | × |
| T28579 | 1025-1028 | CD | denotes | 107 |
| T28580 | 1028-1029 | -RRB- | denotes | ) |
| T28581 | 1030-1034 | VBD | denotes | were |
| T28582 | 1035-1043 | VBN | denotes | infected |
| T28583 | 1044-1048 | IN | denotes | with |
| T28584 | 1049-1065 | JJ | denotes | HXB2-pseudotyped |
| T28585 | 1066-1071 | NN | denotes | NL4-3 |
| T28586 | 1071-1072 | . | denotes | . |
| T28587 | 1072-1080 | NN | denotes | FLAG-Tat |
| T28588 | 1080-1081 | . | denotes | . |
| T28589 | 1081-1082 | NN | denotes | R |
| T28590 | 1082-1083 | NN | denotes | − |
| T28591 | 1083-1084 | NNP | denotes | E |
| T28592 | 1084-1085 | CD | denotes | − |
| T28593 | 1086-1093 | NNS | denotes | virions |
| T28594 | 1093-1094 | , | denotes | , |
| T28595 | 1095-1097 | CC | denotes | or |
| T28596 | 1098-1102 | VBD | denotes | left |
| T28597 | 1103-1113 | JJ | denotes | uninfected |
| T28598 | 1113-1114 | . | denotes | . |
| T28599 | 1115-1131 | CD | denotes | Twenty-four-hour |
| T28600 | 1132-1146 | NN | denotes | post-infection |
| T28601 | 1146-1147 | , | denotes | , |
| T28602 | 1148-1152 | NN | denotes | cell |
| T28603 | 1153-1161 | NNS | denotes | extracts |
| T28604 | 1162-1163 | -LRB- | denotes | ( |
| T28605 | 1163-1164 | CD | denotes | 1 |
| T28606 | 1165-1167 | NN | denotes | mg |
| T28607 | 1167-1168 | -RRB- | denotes | ) |
| T28608 | 1169-1173 | VBD | denotes | were |
| T28609 | 1174-1192 | VBN | denotes | immunoprecipitated |
| T28610 | 1193-1197 | IN | denotes | with |
| T28611 | 1198-1205 | NN | denotes | protein |
| T28612 | 1206-1225 | JJ | denotes | G-Sepharose-coupled |
| T28613 | 1226-1235 | JJ | denotes | anti-FLAG |
| T28614 | 1236-1244 | NN | denotes | antibody |
| T28615 | 1244-1245 | . | denotes | . |
| T28616 | 1246-1261 | NNS | denotes | Immunocomplexes |
| T28617 | 1262-1266 | VBD | denotes | were |
| T28618 | 1267-1276 | VBN | denotes | separated |
| T28619 | 1277-1279 | IN | denotes | by |
| T28620 | 1280-1282 | CD | denotes | 12 |
| T28621 | 1282-1283 | NN | denotes | % |
| T28622 | 1284-1287 | NNP | denotes | SDS |
| T28623 | 1288-1292 | NNP | denotes | PAGE |
| T28624 | 1293-1296 | CC | denotes | and |
| T28625 | 1297-1305 | VBN | denotes | analysed |
| T28626 | 1306-1308 | IN | denotes | by |
| T28627 | 1309-1316 | JJ | denotes | western |
| T28628 | 1317-1325 | VBG | denotes | blotting |
| T28629 | 1326-1330 | IN | denotes | with |
| T28630 | 1331-1339 | JJ | denotes | anti-p65 |
| T28631 | 1339-1340 | , | denotes | , |
| T28632 | 1341-1350 | JJ | denotes | anti-FLAG |
| T28633 | 1351-1354 | CC | denotes | and |
| T28634 | 1355-1365 | JJ | denotes | anti-IκB-α |
| T28635 | 1366-1376 | NNS | denotes | antibodies |
| T28636 | 1376-1377 | . | denotes | . |
| T28637 | 1378-1379 | -LRB- | denotes | ( |
| T28638 | 1379-1380 | NN | denotes | F |
| T28639 | 1380-1381 | -RRB- | denotes | ) |
| T28640 | 1382-1386 | NNP | denotes | U937 |
| T28641 | 1387-1392 | NNS | denotes | cells |
| T28642 | 1393-1394 | -LRB- | denotes | ( |
| T28643 | 1394-1395 | CD | denotes | 5 |
| T28644 | 1396-1397 | RB | denotes | × |
| T28645 | 1398-1401 | CD | denotes | 107 |
| T28646 | 1401-1402 | -RRB- | denotes | ) |
| T28647 | 1403-1407 | VBD | denotes | were |
| T28648 | 1408-1419 | VBN | denotes | transfected |
| T28649 | 1420-1424 | IN | denotes | with |
| T28650 | 1425-1430 | NNP | denotes | siRNA |
| T28651 | 1431-1434 | NNP | denotes | Tat |
| T28652 | 1434-1435 | , | denotes | , |
| T28653 | 1436-1441 | NNP | denotes | siRNA |
| T28654 | 1442-1445 | CD | denotes | p65 |
| T28655 | 1445-1446 | , | denotes | , |
| T28656 | 1447-1452 | NNP | denotes | siRNA |
| T28657 | 1453-1460 | NN | denotes | control |
| T28658 | 1461-1462 | -LRB- | denotes | ( |
| T28659 | 1462-1463 | CD | denotes | 2 |
| T28660 | 1464-1468 | NN | denotes | nmol |
| T28661 | 1468-1469 | -RRB- | denotes | ) |
| T28662 | 1469-1470 | , | denotes | , |
| T28663 | 1471-1473 | CC | denotes | or |
| T28664 | 1474-1478 | VBD | denotes | left |
| T28665 | 1479-1492 | JJ | denotes | untransfected |
| T28666 | 1492-1493 | : | denotes | ; |
| T28667 | 1494-1496 | CD | denotes | 24 |
| T28668 | 1497-1498 | NN | denotes | h |
| T28669 | 1499-1504 | RB | denotes | later |
| T28670 | 1504-1505 | , | denotes | , |
| T28671 | 1506-1511 | NNS | denotes | cells |
| T28672 | 1512-1516 | VBD | denotes | were |
| T28673 | 1517-1525 | VBN | denotes | infected |
| T28674 | 1526-1530 | IN | denotes | with |
| T28675 | 1531-1547 | JJ | denotes | HXB2-pseudotyped |
| T28676 | 1548-1553 | NN | denotes | NL4-3 |
| T28677 | 1553-1554 | . | denotes | . |
| T28678 | 1554-1562 | NN | denotes | FLAG-Tat |
| T28679 | 1562-1563 | . | denotes | . |
| T28680 | 1563-1564 | NN | denotes | R |
| T28681 | 1564-1565 | NN | denotes | − |
| T28682 | 1565-1566 | NNP | denotes | E |
| T28683 | 1566-1567 | CD | denotes | − |
| T28684 | 1568-1575 | NNS | denotes | virions |
| T28685 | 1575-1576 | , | denotes | , |
| T28686 | 1577-1579 | CC | denotes | or |
| T28687 | 1580-1584 | VBD | denotes | left |
| T28688 | 1585-1595 | JJ | denotes | uninfected |
| T28689 | 1595-1596 | . | denotes | . |
| T28690 | 1597-1613 | CD | denotes | Twenty-four-hour |
| T28691 | 1614-1628 | JJ | denotes | post-infection |
| T28692 | 1628-1629 | , | denotes | , |
| T28693 | 1630-1635 | JJ | denotes | total |
| T28694 | 1636-1639 | NNP | denotes | RNA |
| T28695 | 1640-1643 | VBD | denotes | was |
| T28696 | 1644-1652 | VBN | denotes | analysed |
| T28697 | 1653-1656 | IN | denotes | for |
| T28698 | 1657-1663 | JJ | denotes | MIP-1α |
| T28699 | 1664-1674 | NN | denotes | expression |
| T28700 | 1675-1677 | IN | denotes | by |
| T28701 | 1678-1687 | JJ | denotes | real-time |
| T28702 | 1688-1691 | NNP | denotes | PCR |
| T28703 | 1691-1692 | . | denotes | . |
| T28704 | 1693-1694 | -LRB- | denotes | ( |
| T28705 | 1694-1695 | NNP | denotes | G |
| T28706 | 1696-1699 | CC | denotes | and |
| T28707 | 1700-1701 | NNP | denotes | H |
| T28708 | 1701-1702 | -RRB- | denotes | ) |
| T28709 | 1703-1707 | NNP | denotes | U937 |
| T28710 | 1708-1713 | NNS | denotes | cells |
| T28711 | 1714-1715 | -LRB- | denotes | ( |
| T28712 | 1715-1716 | CD | denotes | 5 |
| T28713 | 1717-1718 | RB | denotes | × |
| T28714 | 1719-1722 | CD | denotes | 107 |
| T28715 | 1722-1723 | -RRB- | denotes | ) |
| T28716 | 1724-1728 | VBD | denotes | were |
| T28717 | 1729-1740 | VBN | denotes | transfected |
| T28718 | 1741-1745 | IN | denotes | with |
| T28719 | 1746-1751 | NNP | denotes | siRNA |
| T28720 | 1752-1755 | NNP | denotes | Tat |
| T28721 | 1756-1758 | CC | denotes | or |
| T28722 | 1759-1764 | NNP | denotes | siRNA |
| T28723 | 1765-1772 | NN | denotes | control |
| T28724 | 1773-1774 | -LRB- | denotes | ( |
| T28725 | 1774-1775 | CD | denotes | 2 |
| T28726 | 1776-1780 | NN | denotes | nmol |
| T28727 | 1780-1781 | -RRB- | denotes | ) |
| T28728 | 1781-1782 | , | denotes | , |
| T28729 | 1783-1785 | CC | denotes | or |
| T28730 | 1786-1790 | VBD | denotes | left |
| T28731 | 1791-1804 | JJ | denotes | untransfected |
| T28732 | 1804-1805 | : | denotes | ; |
| T28733 | 1806-1808 | CD | denotes | 24 |
| T28734 | 1809-1810 | NN | denotes | h |
| T28735 | 1811-1816 | RB | denotes | later |
| T28736 | 1816-1817 | , | denotes | , |
| T28737 | 1818-1823 | NNS | denotes | cells |
| T28738 | 1824-1828 | VBD | denotes | were |
| T28739 | 1829-1837 | VBN | denotes | infected |
| T28740 | 1838-1842 | IN | denotes | with |
| T28741 | 1843-1859 | JJ | denotes | HXB2-pseudotyped |
| T28742 | 1860-1865 | NN | denotes | NL4-3 |
| T28743 | 1865-1866 | . | denotes | . |
| T28744 | 1866-1874 | NN | denotes | FLAG-Tat |
| T28745 | 1874-1875 | . | denotes | . |
| T28746 | 1875-1876 | NN | denotes | R |
| T28747 | 1876-1877 | NN | denotes | − |
| T28748 | 1877-1878 | NNP | denotes | E |
| T28749 | 1878-1879 | CD | denotes | − |
| T28750 | 1880-1887 | NNS | denotes | virions |
| T28751 | 1887-1888 | , | denotes | , |
| T28752 | 1889-1891 | CC | denotes | or |
| T28753 | 1892-1896 | VBD | denotes | left |
| T28754 | 1897-1907 | JJ | denotes | uninfected |
| T28755 | 1907-1908 | . | denotes | . |
| T28756 | 1909-1925 | CD | denotes | Twenty-four-hour |
| T28757 | 1926-1940 | NN | denotes | post-infection |
| T28758 | 1940-1941 | , | denotes | , |
| T28759 | 1942-1946 | NNP | denotes | ChIP |
| T28760 | 1947-1950 | VBD | denotes | was |
| T28761 | 1951-1960 | VBN | denotes | performed |
| T28762 | 1961-1965 | IN | denotes | with |
| T28763 | 1966-1974 | JJ | denotes | anti-p65 |
| T28764 | 1975-1976 | -LRB- | denotes | ( |
| T28765 | 1976-1977 | NNP | denotes | G |
| T28766 | 1977-1978 | -RRB- | denotes | ) |
| T28767 | 1979-1981 | CC | denotes | or |
| T28768 | 1982-1991 | JJ | denotes | anti-FLAG |
| T28769 | 1992-1993 | -LRB- | denotes | ( |
| T28770 | 1993-1994 | NNP | denotes | H |
| T28771 | 1994-1995 | -RRB- | denotes | ) |
| T28772 | 1995-1996 | . | denotes | . |
| T28773 | 1997-2006 | JJ | denotes | Real-time |
| T28774 | 2007-2010 | NNP | denotes | PCR |
| T28775 | 2011-2014 | VBD | denotes | was |
| T28776 | 2015-2024 | VBN | denotes | performed |
| T28777 | 2025-2029 | IN | denotes | with |
| T28778 | 2030-2037 | NNS | denotes | primers |
| T28779 | 2038-2046 | JJ | denotes | specific |
| T28780 | 2047-2050 | IN | denotes | for |
| T28781 | 2051-2057 | NNP | denotes | MIP-1α |
| T28782 | 2058-2061 | CC | denotes | and |
| T28783 | 2062-2067 | NNP | denotes | GAPDH |
| T28784 | 2068-2077 | NNS | denotes | promoters |
| T28785 | 2077-2078 | . | denotes | . |
| T28786 | 2079-2085 | NNS | denotes | Values |
| T28787 | 2086-2087 | -LRB- | denotes | ( |
| T28788 | 2087-2091 | JJ | denotes | mean |
| T28789 | 2092-2093 | NN | denotes | ± |
| T28790 | 2094-2096 | NNP | denotes | SE |
| T28791 | 2096-2097 | , | denotes | , |
| T28792 | 2098-2099 | JJ | denotes | n |
| T28793 | 2100-2101 | SYM | denotes | = |
| T28794 | 2102-2103 | LS | denotes | 3 |
| T28795 | 2103-2104 | -RRB- | denotes | ) |
| T28796 | 2105-2108 | VBP | denotes | are |
| T28797 | 2109-2114 | VBN | denotes | shown |
| T28798 | 2114-2115 | . | denotes | . |
| T28799 | 2116-2119 | DT | denotes | The |
| T28800 | 2120-2129 | NNS | denotes | asterisks |
| T28801 | 2130-2138 | VBP | denotes | indicate |
| T28802 | 2139-2152 | RB | denotes | statistically |
| T28803 | 2153-2164 | JJ | denotes | significant |
| T28804 | 2165-2176 | NNS | denotes | differences |
| T28805 | 2177-2185 | VBN | denotes | compared |
| T28806 | 2186-2188 | TO | denotes | to |
| T28807 | 2189-2192 | DT | denotes | the |
| T28808 | 2193-2200 | NN | denotes | control |
| T28809 | 2201-2202 | -LRB- | denotes | ( |
| T28810 | 2202-2206 | JJ | denotes | mock |
| T28811 | 2206-2207 | -RRB- | denotes | ) |
| T28812 | 2207-2208 | , | denotes | , |
| T28813 | 2209-2218 | VBG | denotes | according |
| T28814 | 2219-2221 | TO | denotes | to |
| T28815 | 2222-2225 | DT | denotes | the |
| T28816 | 2226-2233 | NN | denotes | Student |
| T28817 | 2233-2235 | POS | denotes | 's |
| T28818 | 2236-2242 | JJS | denotes | t-test |
| T28819 | 2243-2244 | -LRB- | denotes | ( |
| T28820 | 2244-2245 | NNP | denotes | P |
| T28821 | 2246-2247 | CD | denotes | < |
| T28822 | 2248-2252 | CD | denotes | 0.05 |
| T28823 | 2252-2253 | -RRB- | denotes | ) |
| T28824 | 2253-2254 | . | denotes | . |
| R22137 | T28367 | T28371 | prep | In,sustains |
| R22138 | T28368 | T28369 | compound | HIV-1,infection |
| R22139 | T28369 | T28367 | pobj | infection,In |
| R22140 | T28370 | T28371 | nsubj | Tat,sustains |
| R22141 | T28371 | T28371 | ROOT | sustains,sustains |
| R22142 | T28372 | T28374 | det | the,activity |
| R22143 | T28373 | T28374 | amod | NF-κB,activity |
| R22144 | T28374 | T28371 | dobj | activity,sustains |
| R22145 | T28375 | T28371 | cc | and,sustains |
| R22146 | T28376 | T28371 | conj | enhances,sustains |
| R22147 | T28377 | T28379 | det | the,expression |
| R22148 | T28378 | T28379 | amod | MIP-1α,expression |
| R22149 | T28379 | T28376 | dobj | expression,enhances |
| R22150 | T28380 | T28376 | prep | via,enhances |
| R22151 | T28381 | T28380 | pobj | interaction,via |
| R22152 | T28382 | T28381 | prep | with,interaction |
| R22153 | T28383 | T28382 | pobj | IκB-α,with |
| R22154 | T28384 | T28383 | cc | and,IκB-α |
| R22155 | T28385 | T28383 | conj | p65,IκB-α |
| R22156 | T28386 | T28371 | punct | .,sustains |
| R22157 | T28387 | T28388 | nummod | U937,cells |
| R22158 | T28388 | T28395 | nsubjpass | cells,transfected |
| R22159 | T28389 | T28388 | punct | (,cells |
| R22160 | T28390 | T28392 | quantmod | 5,107 |
| R22161 | T28391 | T28392 | quantmod | ×,107 |
| R22162 | T28392 | T28388 | appos | 107,cells |
| R22163 | T28393 | T28388 | punct | ),cells |
| R22164 | T28394 | T28395 | auxpass | were,transfected |
| R22165 | T28395 | T28416 | ccomp | transfected,infected |
| R22166 | T28396 | T28395 | prep | with,transfected |
| R22167 | T28397 | T28398 | compound | siRNA,Tat |
| R22168 | T28398 | T28396 | pobj | Tat,with |
| R22169 | T28399 | T28395 | punct | ",",transfected |
| R22170 | T28400 | T28401 | compound | siRNA,control |
| R22171 | T28401 | T28395 | appos | control,transfected |
| R22172 | T28402 | T28404 | punct | (,nmol |
| R22173 | T28403 | T28404 | nummod | 2,nmol |
| R22174 | T28404 | T28401 | appos | nmol,control |
| R22175 | T28405 | T28401 | punct | ),control |
| R22176 | T28406 | T28401 | punct | ",",control |
| R22177 | T28407 | T28395 | cc | or,transfected |
| R22178 | T28408 | T28395 | conj | left,transfected |
| R22179 | T28409 | T28408 | oprd | untransfected,left |
| R22180 | T28410 | T28416 | punct | ;,infected |
| R22181 | T28411 | T28412 | nummod | 24,h |
| R22182 | T28412 | T28416 | npadvmod | h,infected |
| R22183 | T28413 | T28414 | amod | later,cells |
| R22184 | T28414 | T28416 | nsubjpass | cells,infected |
| R22185 | T28415 | T28416 | auxpass | were,infected |
| R22186 | T28416 | T28416 | ROOT | infected,infected |
| R22187 | T28417 | T28416 | prep | with,infected |
| R22188 | T28418 | T28419 | amod | HXB2-pseudotyped,NL4-3 |
| R22189 | T28419 | T28417 | pobj | NL4-3,with |
| R22190 | T28420 | T28416 | punct | .,infected |
| R22191 | T28421 | T28421 | ROOT | FLAG-Tat,FLAG-Tat |
| R22192 | T28422 | T28421 | punct | .,FLAG-Tat |
| R22193 | T28423 | T28423 | ROOT | R,R |
| R22194 | T28424 | T28435 | nsubj | −,harvested |
| R22195 | T28425 | T28426 | compound | E,− |
| R22196 | T28426 | T28427 | nummod | −,virions |
| R22197 | T28427 | T28424 | appos | virions,− |
| R22198 | T28428 | T28430 | punct | (,ng |
| R22199 | T28429 | T28430 | nummod | 500,ng |
| R22200 | T28430 | T28427 | parataxis | ng,virions |
| R22201 | T28431 | T28430 | prep | of,ng |
| R22202 | T28432 | T28431 | pobj | p24,of |
| R22203 | T28433 | T28430 | punct | ),ng |
| R22204 | T28434 | T28424 | cc | and,− |
| R22205 | T28435 | T28423 | acl | harvested,R |
| R22206 | T28436 | T28435 | prep | at,harvested |
| R22207 | T28437 | T28439 | det | the,time |
| R22208 | T28438 | T28439 | amod | indicated,time |
| R22209 | T28439 | T28436 | pobj | time,at |
| R22210 | T28440 | T28423 | punct | .,R |
| R22211 | T28441 | T28442 | punct | (,A |
| R22212 | T28442 | T28442 | ROOT | A,A |
| R22213 | T28443 | T28442 | punct | ),A |
| R22214 | T28444 | T28445 | amod | Real-time,PCR |
| R22215 | T28445 | T28449 | nsubj | PCR,measured |
| R22216 | T28446 | T28445 | prep | of,PCR |
| R22217 | T28447 | T28448 | amod | total,RNA |
| R22218 | T28448 | T28446 | pobj | RNA,of |
| R22219 | T28449 | T28455 | ccomp | measured,measured |
| R22220 | T28450 | T28452 | det | the,expression |
| R22221 | T28451 | T28452 | compound | Tat,expression |
| R22222 | T28452 | T28449 | dobj | expression,measured |
| R22223 | T28453 | T28455 | punct | ;,measured |
| R22224 | T28454 | T28455 | nsubj | ELISA,measured |
| R22225 | T28455 | T28455 | ROOT | measured,measured |
| R22226 | T28456 | T28457 | det | the,amount |
| R22227 | T28457 | T28455 | dobj | amount,measured |
| R22228 | T28458 | T28457 | prep | of,amount |
| R22229 | T28459 | T28458 | pobj | p24,of |
| R22230 | T28460 | T28459 | prep | in,p24 |
| R22231 | T28461 | T28463 | amod | whole,extracts |
| R22232 | T28462 | T28463 | compound | cell,extracts |
| R22233 | T28463 | T28460 | pobj | extracts,in |
| R22234 | T28464 | T28455 | punct | .,measured |
| R22235 | T28465 | T28466 | punct | (,B |
| R22236 | T28466 | T28466 | ROOT | B,B |
| R22237 | T28467 | T28466 | punct | ),B |
| R22238 | T28468 | T28469 | det | The,binding |
| R22239 | T28469 | T28478 | nsubjpass | binding,measured |
| R22240 | T28470 | T28469 | prep | of,binding |
| R22241 | T28471 | T28470 | pobj | p65,of |
| R22242 | T28472 | T28469 | prep | to,binding |
| R22243 | T28473 | T28476 | det | the,oligonucleotide |
| R22244 | T28474 | T28476 | nmod | NF-κB,oligonucleotide |
| R22245 | T28475 | T28476 | amod | double-stranded,oligonucleotide |
| R22246 | T28476 | T28472 | pobj | oligonucleotide,to |
| R22247 | T28477 | T28478 | auxpass | was,measured |
| R22248 | T28478 | T28478 | ROOT | measured,measured |
| R22249 | T28479 | T28478 | prep | in,measured |
| R22250 | T28480 | T28481 | amod | nuclear,extracts |
| R22251 | T28481 | T28479 | pobj | extracts,in |
| R22252 | T28482 | T28481 | punct | (,extracts |
| R22253 | T28483 | T28484 | nummod | 10,µg |
| R22254 | T28484 | T28481 | appos | µg,extracts |
| R22255 | T28485 | T28481 | punct | ),extracts |
| R22256 | T28486 | T28478 | advcl | using,measured |
| R22257 | T28487 | T28493 | det | the,kit |
| R22258 | T28488 | T28491 | compound | NF-κB,ELISA |
| R22259 | T28489 | T28491 | compound | Transcription,ELISA |
| R22260 | T28490 | T28491 | compound | Factor,ELISA |
| R22261 | T28491 | T28493 | compound | ELISA,kit |
| R22262 | T28492 | T28493 | compound | assay,kit |
| R22263 | T28493 | T28486 | dobj | kit,using |
| R22264 | T28494 | T28493 | punct | (,kit |
| R22265 | T28495 | T28493 | appos | Cayman,kit |
| R22266 | T28496 | T28493 | punct | ),kit |
| R22267 | T28497 | T28478 | punct | .,measured |
| R22268 | T28498 | T28499 | punct | (,C |
| R22269 | T28499 | T28499 | ROOT | C,C |
| R22270 | T28500 | T28499 | punct | ),C |
| R22271 | T28501 | T28503 | det | The,content |
| R22272 | T28502 | T28503 | amod | IκB-α,content |
| R22273 | T28503 | T28505 | nsubjpass | content,analysed |
| R22274 | T28504 | T28505 | auxpass | was,analysed |
| R22275 | T28505 | T28505 | ROOT | analysed,analysed |
| R22276 | T28506 | T28505 | prep | by,analysed |
| R22277 | T28507 | T28508 | nummod | 12,% |
| R22278 | T28508 | T28509 | compound | %,SDS |
| R22279 | T28509 | T28506 | pobj | SDS,by |
| R22280 | T28510 | T28509 | conj | PAGE,SDS |
| R22281 | T28511 | T28510 | cc | and,PAGE |
| R22282 | T28512 | T28513 | amod | western,blotting |
| R22283 | T28513 | T28510 | conj | blotting,PAGE |
| R22284 | T28514 | T28513 | prep | of,blotting |
| R22285 | T28515 | T28516 | amod | cytosolic,extracts |
| R22286 | T28516 | T28514 | pobj | extracts,of |
| R22287 | T28517 | T28516 | punct | (,extracts |
| R22288 | T28518 | T28519 | nummod | 20,µg |
| R22289 | T28519 | T28516 | appos | µg,extracts |
| R22290 | T28520 | T28516 | punct | ),extracts |
| R22291 | T28521 | T28505 | advcl | using,analysed |
| R22292 | T28522 | T28523 | amod | anti-IκB-α,antibody |
| R22293 | T28523 | T28521 | dobj | antibody,using |
| R22294 | T28524 | T28505 | punct | .,analysed |
| R22295 | T28525 | T28526 | compound | Densitometry,values |
| R22296 | T28526 | T28534 | nsubjpass | values,expressed |
| R22297 | T28527 | T28528 | punct | (,D |
| R22298 | T28528 | T28526 | appos | D,values |
| R22299 | T28529 | T28528 | punct | ),D |
| R22300 | T28530 | T28528 | prep | of,D |
| R22301 | T28531 | T28532 | det | the,bands |
| R22302 | T28532 | T28530 | pobj | bands,of |
| R22303 | T28533 | T28534 | auxpass | were,expressed |
| R22304 | T28534 | T28534 | ROOT | expressed,expressed |
| R22305 | T28535 | T28536 | mark | as,fold |
| R22306 | T28536 | T28534 | advcl | fold,expressed |
| R22307 | T28537 | T28536 | dobj | increase,fold |
| R22308 | T28538 | T28536 | prep | above,fold |
| R22309 | T28539 | T28540 | det | the,control |
| R22310 | T28540 | T28538 | pobj | control,above |
| R22311 | T28541 | T28540 | punct | (,control |
| R22312 | T28542 | T28540 | amod | mock,control |
| R22313 | T28543 | T28540 | punct | ),control |
| R22314 | T28544 | T28534 | punct | .,expressed |
| R22315 | T28545 | T28551 | punct | (,measured |
| R22316 | T28546 | T28549 | compound | D,activity |
| R22317 | T28547 | T28548 | punct | ),IKK |
| R22318 | T28548 | T28549 | compound | IKK,activity |
| R22319 | T28549 | T28551 | nsubjpass | activity,measured |
| R22320 | T28550 | T28551 | auxpass | was,measured |
| R22321 | T28551 | T28551 | ROOT | measured,measured |
| R22322 | T28552 | T28551 | prep | in,measured |
| R22323 | T28553 | T28554 | amod | cytosolic,cell |
| R22324 | T28554 | T28555 | compound | cell,extracts |
| R22325 | T28555 | T28552 | pobj | extracts,in |
| R22326 | T28556 | T28555 | punct | (,extracts |
| R22327 | T28557 | T28558 | nummod | 100,µg |
| R22328 | T28558 | T28555 | appos | µg,extracts |
| R22329 | T28559 | T28555 | punct | ),extracts |
| R22330 | T28560 | T28551 | advcl | using,measured |
| R22331 | T28561 | T28564 | compound | HTScan,Assay |
| R22332 | T28562 | T28564 | compound | IKK,Assay |
| R22333 | T28563 | T28564 | compound | Kinase,Assay |
| R22334 | T28564 | T28560 | dobj | Assay,using |
| R22335 | T28565 | T28568 | punct | (,Technology |
| R22336 | T28566 | T28568 | compound | Cell,Technology |
| R22337 | T28567 | T28568 | compound | Signaling,Technology |
| R22338 | T28568 | T28564 | appos | Technology,Assay |
| R22339 | T28569 | T28564 | punct | ),Assay |
| R22340 | T28570 | T28551 | punct | .,measured |
| R22341 | T28571 | T28582 | punct | (,infected |
| R22342 | T28572 | T28575 | nmod | E,cells |
| R22343 | T28573 | T28572 | punct | ),E |
| R22344 | T28574 | T28575 | compound | U937,cells |
| R22345 | T28575 | T28582 | nsubjpass | cells,infected |
| R22346 | T28576 | T28575 | punct | (,cells |
| R22347 | T28577 | T28579 | nummod | 5,107 |
| R22348 | T28578 | T28579 | quantmod | ×,107 |
| R22349 | T28579 | T28575 | appos | 107,cells |
| R22350 | T28580 | T28575 | punct | ),cells |
| R22351 | T28581 | T28582 | auxpass | were,infected |
| R22352 | T28582 | T28582 | ROOT | infected,infected |
| R22353 | T28583 | T28582 | prep | with,infected |
| R22354 | T28584 | T28585 | amod | HXB2-pseudotyped,NL4-3 |
| R22355 | T28585 | T28583 | pobj | NL4-3,with |
| R22356 | T28586 | T28582 | punct | .,infected |
| R22357 | T28587 | T28587 | ROOT | FLAG-Tat,FLAG-Tat |
| R22358 | T28588 | T28587 | punct | .,FLAG-Tat |
| R22359 | T28589 | T28593 | nmod | R,virions |
| R22360 | T28590 | T28593 | nummod | −,virions |
| R22361 | T28591 | T28592 | compound | E,− |
| R22362 | T28592 | T28593 | nummod | −,virions |
| R22363 | T28593 | T28596 | nsubj | virions,left |
| R22364 | T28594 | T28593 | punct | ",",virions |
| R22365 | T28595 | T28593 | cc | or,virions |
| R22366 | T28596 | T28596 | ROOT | left,left |
| R22367 | T28597 | T28596 | oprd | uninfected,left |
| R22368 | T28598 | T28596 | punct | .,left |
| R22369 | T28599 | T28600 | nummod | Twenty-four-hour,post-infection |
| R22370 | T28600 | T28609 | nsubjpass | post-infection,immunoprecipitated |
| R22371 | T28601 | T28603 | punct | ",",extracts |
| R22372 | T28602 | T28603 | compound | cell,extracts |
| R22373 | T28603 | T28600 | appos | extracts,post-infection |
| R22374 | T28604 | T28603 | punct | (,extracts |
| R22375 | T28605 | T28606 | nummod | 1,mg |
| R22376 | T28606 | T28603 | appos | mg,extracts |
| R22377 | T28607 | T28603 | punct | ),extracts |
| R22378 | T28608 | T28609 | auxpass | were,immunoprecipitated |
| R22379 | T28609 | T28609 | ROOT | immunoprecipitated,immunoprecipitated |
| R22380 | T28610 | T28609 | prep | with,immunoprecipitated |
| R22381 | T28611 | T28614 | nmod | protein,antibody |
| R22382 | T28612 | T28614 | amod | G-Sepharose-coupled,antibody |
| R22383 | T28613 | T28614 | amod | anti-FLAG,antibody |
| R22384 | T28614 | T28610 | pobj | antibody,with |
| R22385 | T28615 | T28609 | punct | .,immunoprecipitated |
| R22386 | T28616 | T28618 | nsubjpass | Immunocomplexes,separated |
| R22387 | T28617 | T28618 | auxpass | were,separated |
| R22388 | T28618 | T28618 | ROOT | separated,separated |
| R22389 | T28619 | T28618 | prep | by,separated |
| R22390 | T28620 | T28621 | nummod | 12,% |
| R22391 | T28621 | T28619 | pobj | %,by |
| R22392 | T28622 | T28623 | compound | SDS,PAGE |
| R22393 | T28623 | T28618 | npadvmod | PAGE,separated |
| R22394 | T28624 | T28623 | cc | and,PAGE |
| R22395 | T28625 | T28623 | conj | analysed,PAGE |
| R22396 | T28626 | T28625 | agent | by,analysed |
| R22397 | T28627 | T28628 | amod | western,blotting |
| R22398 | T28628 | T28626 | pobj | blotting,by |
| R22399 | T28629 | T28628 | prep | with,blotting |
| R22400 | T28630 | T28635 | amod | anti-p65,antibodies |
| R22401 | T28631 | T28630 | punct | ",",anti-p65 |
| R22402 | T28632 | T28630 | conj | anti-FLAG,anti-p65 |
| R22403 | T28633 | T28632 | cc | and,anti-FLAG |
| R22404 | T28634 | T28632 | conj | anti-IκB-α,anti-FLAG |
| R22405 | T28635 | T28629 | pobj | antibodies,with |
| R22406 | T28636 | T28618 | punct | .,separated |
| R22407 | T28637 | T28648 | punct | (,transfected |
| R22408 | T28638 | T28641 | compound | F,cells |
| R22409 | T28639 | T28640 | punct | ),U937 |
| R22410 | T28640 | T28641 | compound | U937,cells |
| R22411 | T28641 | T28648 | nsubjpass | cells,transfected |
| R22412 | T28642 | T28641 | punct | (,cells |
| R22413 | T28643 | T28645 | quantmod | 5,107 |
| R22414 | T28644 | T28645 | quantmod | ×,107 |
| R22415 | T28645 | T28641 | appos | 107,cells |
| R22416 | T28646 | T28641 | punct | ),cells |
| R22417 | T28647 | T28648 | auxpass | were,transfected |
| R22418 | T28648 | T28673 | ccomp | transfected,infected |
| R22419 | T28649 | T28648 | prep | with,transfected |
| R22420 | T28650 | T28651 | compound | siRNA,Tat |
| R22421 | T28651 | T28649 | pobj | Tat,with |
| R22422 | T28652 | T28648 | punct | ",",transfected |
| R22423 | T28653 | T28648 | dep | siRNA,transfected |
| R22424 | T28654 | T28653 | appos | p65,siRNA |
| R22425 | T28655 | T28653 | punct | ",",siRNA |
| R22426 | T28656 | T28657 | compound | siRNA,control |
| R22427 | T28657 | T28653 | appos | control,siRNA |
| R22428 | T28658 | T28660 | punct | (,nmol |
| R22429 | T28659 | T28660 | nummod | 2,nmol |
| R22430 | T28660 | T28657 | appos | nmol,control |
| R22431 | T28661 | T28657 | punct | ),control |
| R22432 | T28662 | T28653 | punct | ",",siRNA |
| R22433 | T28663 | T28648 | cc | or,transfected |
| R22434 | T28664 | T28648 | conj | left,transfected |
| R22435 | T28665 | T28664 | oprd | untransfected,left |
| R22436 | T28666 | T28673 | punct | ;,infected |
| R22437 | T28667 | T28668 | nummod | 24,h |
| R22438 | T28668 | T28669 | npadvmod | h,later |
| R22439 | T28669 | T28673 | advmod | later,infected |
| R22440 | T28670 | T28673 | punct | ",",infected |
| R22441 | T28671 | T28673 | nsubjpass | cells,infected |
| R22442 | T28672 | T28673 | auxpass | were,infected |
| R22443 | T28673 | T28673 | ROOT | infected,infected |
| R22444 | T28674 | T28673 | prep | with,infected |
| R22445 | T28675 | T28676 | amod | HXB2-pseudotyped,NL4-3 |
| R22446 | T28676 | T28674 | pobj | NL4-3,with |
| R22447 | T28677 | T28673 | punct | .,infected |
| R22448 | T28678 | T28678 | ROOT | FLAG-Tat,FLAG-Tat |
| R22449 | T28679 | T28678 | punct | .,FLAG-Tat |
| R22450 | T28680 | T28684 | nmod | R,virions |
| R22451 | T28681 | T28684 | nummod | −,virions |
| R22452 | T28682 | T28683 | compound | E,− |
| R22453 | T28683 | T28684 | nummod | −,virions |
| R22454 | T28684 | T28687 | nsubj | virions,left |
| R22455 | T28685 | T28684 | punct | ",",virions |
| R22456 | T28686 | T28684 | cc | or,virions |
| R22457 | T28687 | T28687 | ROOT | left,left |
| R22458 | T28688 | T28687 | oprd | uninfected,left |
| R22459 | T28689 | T28687 | punct | .,left |
| R22460 | T28690 | T28691 | nummod | Twenty-four-hour,post-infection |
| R22461 | T28691 | T28695 | nsubj | post-infection,was |
| R22462 | T28692 | T28691 | punct | ",",post-infection |
| R22463 | T28693 | T28694 | amod | total,RNA |
| R22464 | T28694 | T28691 | appos | RNA,post-infection |
| R22465 | T28695 | T28695 | ROOT | was,was |
| R22466 | T28696 | T28695 | attr | analysed,was |
| R22467 | T28697 | T28696 | prep | for,analysed |
| R22468 | T28698 | T28699 | amod | MIP-1α,expression |
| R22469 | T28699 | T28697 | pobj | expression,for |
| R22470 | T28700 | T28699 | prep | by,expression |
| R22471 | T28701 | T28702 | amod | real-time,PCR |
| R22472 | T28702 | T28700 | pobj | PCR,by |
| R22473 | T28703 | T28695 | punct | .,was |
| R22474 | T28704 | T28709 | punct | (,U937 |
| R22475 | T28705 | T28709 | nmod | G,U937 |
| R22476 | T28706 | T28705 | cc | and,G |
| R22477 | T28707 | T28705 | conj | H,G |
| R22478 | T28708 | T28709 | punct | ),U937 |
| R22479 | T28709 | T28710 | compound | U937,cells |
| R22480 | T28710 | T28717 | nsubjpass | cells,transfected |
| R22481 | T28711 | T28710 | punct | (,cells |
| R22482 | T28712 | T28714 | quantmod | 5,107 |
| R22483 | T28713 | T28714 | quantmod | ×,107 |
| R22484 | T28714 | T28710 | appos | 107,cells |
| R22485 | T28715 | T28710 | punct | ),cells |
| R22486 | T28716 | T28717 | auxpass | were,transfected |
| R22487 | T28717 | T28739 | ccomp | transfected,infected |
| R22488 | T28718 | T28717 | prep | with,transfected |
| R22489 | T28719 | T28720 | compound | siRNA,Tat |
| R22490 | T28720 | T28718 | pobj | Tat,with |
| R22491 | T28721 | T28720 | cc | or,Tat |
| R22492 | T28722 | T28723 | compound | siRNA,control |
| R22493 | T28723 | T28720 | conj | control,Tat |
| R22494 | T28724 | T28726 | punct | (,nmol |
| R22495 | T28725 | T28726 | nummod | 2,nmol |
| R22496 | T28726 | T28723 | appos | nmol,control |
| R22497 | T28727 | T28726 | punct | ),nmol |
| R22498 | T28728 | T28723 | punct | ",",control |
| R22499 | T28729 | T28723 | cc | or,control |
| R22500 | T28730 | T28717 | advcl | left,transfected |
| R22501 | T28731 | T28730 | oprd | untransfected,left |
| R22502 | T28732 | T28739 | punct | ;,infected |
| R22503 | T28733 | T28734 | nummod | 24,h |
| R22504 | T28734 | T28735 | npadvmod | h,later |
| R22505 | T28735 | T28739 | advmod | later,infected |
| R22506 | T28736 | T28739 | punct | ",",infected |
| R22507 | T28737 | T28739 | nsubjpass | cells,infected |
| R22508 | T28738 | T28739 | auxpass | were,infected |
| R22509 | T28739 | T28739 | ROOT | infected,infected |
| R22510 | T28740 | T28739 | prep | with,infected |
| R22511 | T28741 | T28742 | amod | HXB2-pseudotyped,NL4-3 |
| R22512 | T28742 | T28740 | pobj | NL4-3,with |
| R22513 | T28743 | T28739 | punct | .,infected |
| R22514 | T28744 | T28744 | ROOT | FLAG-Tat,FLAG-Tat |
| R22515 | T28745 | T28744 | punct | .,FLAG-Tat |
| R22516 | T28746 | T28750 | nmod | R,virions |
| R22517 | T28747 | T28750 | nummod | −,virions |
| R22518 | T28748 | T28749 | compound | E,− |
| R22519 | T28749 | T28750 | nummod | −,virions |
| R22520 | T28750 | T28753 | nsubj | virions,left |
| R22521 | T28751 | T28750 | punct | ",",virions |
| R22522 | T28752 | T28750 | cc | or,virions |
| R22523 | T28753 | T28753 | ROOT | left,left |
| R22524 | T28754 | T28753 | oprd | uninfected,left |
| R22525 | T28755 | T28753 | punct | .,left |
| R22526 | T28756 | T28757 | nummod | Twenty-four-hour,post-infection |
| R22527 | T28757 | T28761 | npadvmod | post-infection,performed |
| R22528 | T28758 | T28761 | punct | ",",performed |
| R22529 | T28759 | T28761 | nsubjpass | ChIP,performed |
| R22530 | T28760 | T28761 | auxpass | was,performed |
| R22531 | T28761 | T28761 | ROOT | performed,performed |
| R22532 | T28762 | T28761 | prep | with,performed |
| R22533 | T28763 | T28762 | pobj | anti-p65,with |
| R22534 | T28764 | T28765 | punct | (,G |
| R22535 | T28765 | T28763 | appos | G,anti-p65 |
| R22536 | T28766 | T28761 | punct | ),performed |
| R22537 | T28767 | T28761 | cc | or,performed |
| R22538 | T28768 | T28761 | conj | anti-FLAG,performed |
| R22539 | T28769 | T28770 | punct | (,H |
| R22540 | T28770 | T28768 | appos | H,anti-FLAG |
| R22541 | T28771 | T28768 | punct | ),anti-FLAG |
| R22542 | T28772 | T28761 | punct | .,performed |
| R22543 | T28773 | T28774 | compound | Real-time,PCR |
| R22544 | T28774 | T28776 | nsubjpass | PCR,performed |
| R22545 | T28775 | T28776 | auxpass | was,performed |
| R22546 | T28776 | T28776 | ROOT | performed,performed |
| R22547 | T28777 | T28776 | prep | with,performed |
| R22548 | T28778 | T28777 | pobj | primers,with |
| R22549 | T28779 | T28778 | amod | specific,primers |
| R22550 | T28780 | T28779 | prep | for,specific |
| R22551 | T28781 | T28780 | pobj | MIP-1α,for |
| R22552 | T28782 | T28781 | cc | and,MIP-1α |
| R22553 | T28783 | T28781 | conj | GAPDH,MIP-1α |
| R22554 | T28784 | T28778 | conj | promoters,primers |
| R22555 | T28785 | T28776 | punct | .,performed |
| R22556 | T28786 | T28797 | nsubjpass | Values,shown |
| R22557 | T28787 | T28790 | punct | (,SE |
| R22558 | T28788 | T28790 | amod | mean,SE |
| R22559 | T28789 | T28790 | compound | ±,SE |
| R22560 | T28790 | T28786 | appos | SE,Values |
| R22561 | T28791 | T28790 | punct | ",",SE |
| R22562 | T28792 | T28797 | nsubjpass | n,shown |
| R22563 | T28793 | T28794 | punct | =,3 |
| R22564 | T28794 | T28792 | advmod | 3,n |
| R22565 | T28795 | T28797 | punct | ),shown |
| R22566 | T28796 | T28797 | auxpass | are,shown |
| R22567 | T28797 | T28797 | ROOT | shown,shown |
| R22568 | T28798 | T28797 | punct | .,shown |
| R22569 | T28799 | T28800 | det | The,asterisks |
| R22570 | T28800 | T28801 | nsubj | asterisks,indicate |
| R22571 | T28801 | T28801 | ROOT | indicate,indicate |
| R22572 | T28802 | T28803 | advmod | statistically,significant |
| R22573 | T28803 | T28804 | amod | significant,differences |
| R22574 | T28804 | T28801 | dobj | differences,indicate |
| R22575 | T28805 | T28804 | acl | compared,differences |
| R22576 | T28806 | T28805 | prep | to,compared |
| R22577 | T28807 | T28808 | det | the,control |
| R22578 | T28808 | T28806 | pobj | control,to |
| R22579 | T28809 | T28808 | punct | (,control |
| R22580 | T28810 | T28808 | amod | mock,control |
| R22581 | T28811 | T28808 | punct | ),control |
| R22582 | T28812 | T28801 | punct | ",",indicate |
| R22583 | T28813 | T28801 | prep | according,indicate |
| R22584 | T28814 | T28813 | prep | to,according |
| R22585 | T28815 | T28816 | det | the,Student |
| R22586 | T28816 | T28818 | poss | Student,t-test |
| R22587 | T28817 | T28816 | case | 's,Student |
| R22588 | T28818 | T28814 | pobj | t-test,to |
| R22589 | T28819 | T28818 | punct | (,t-test |
| R22590 | T28820 | T28823 | nmod | P,) |
| R22591 | T28821 | T28820 | nummod | <,P |
| R22592 | T28822 | T28820 | nummod | 0.05,P |
| R22593 | T28823 | T28818 | punct | ),t-test |
| R22594 | T28824 | T28801 | punct | .,indicate |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28825 | 609-622 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | Transcription |
| T28826 | 884-887 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
| T28827 | 959-962 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28828 | 492-499 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T28829 | 775-783 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
| T28830 | 1236-1244 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
| T28831 | 1366-1376 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
| T28832 | 884-887 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
| T28833 | 959-962 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28834 | 137-142 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28835 | 244-249 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28836 | 1014-1019 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28837 | 1387-1392 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28838 | 1506-1511 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28839 | 1708-1713 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28840 | 1818-1823 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T28841 | 306-313 | http://purl.obolibrary.org/obo/GO_0019012 | denotes | virions |
| T28842 | 1086-1093 | http://purl.obolibrary.org/obo/GO_0019012 | denotes | virions |
| T28843 | 1568-1575 | http://purl.obolibrary.org/obo/GO_0019012 | denotes | virions |
| T28844 | 1880-1887 | http://purl.obolibrary.org/obo/GO_0019012 | denotes | virions |
| T28845 | 775-783 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T28846 | 1236-1244 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T28847 | 1366-1376 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
| T28848 | 775-783 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T28849 | 1236-1244 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T28850 | 1366-1376 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28289 | 10-131 | Sentence | denotes | In HIV-1 infection Tat sustains the NF-κB activity and enhances the MIP-1α expression via interaction with IκB-α and p65. |
| T28290 | 132-784 | Sentence | denotes | U937 cells (5 × 107) were transfected with siRNA Tat, siRNA control (2 nmol), or left untransfected; 24 h later cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions (500 ng of p24) and harvested at the indicated time. (A) Real-time PCR of total RNA measured the Tat expression; ELISA measured the amount of p24 in whole cell extracts. (B) The binding of p65 to the NF-κB double-stranded oligonucleotide was measured in nuclear extracts (10 µg) using the NF-κB Transcription Factor ELISA assay kit (Cayman). (C) The IκB-α content was analysed by 12% SDS–PAGE and western blotting of cytosolic extracts (20 µg) using anti-IκB-α antibody. |
| T28291 | 785-1114 | Sentence | denotes | Densitometry values (D) of the bands were expressed as fold increase above the control (mock). (D) IKK activity was measured in cytosolic cell extracts (100 µg) using HTScan IKK Kinase Assay (Cell Signaling Technology). (E) U937 cells (5 × 107) were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected. |
| T28292 | 1115-1245 | Sentence | denotes | Twenty-four-hour post-infection, cell extracts (1 mg) were immunoprecipitated with protein G-Sepharose-coupled anti-FLAG antibody. |
| T28293 | 1246-1596 | Sentence | denotes | Immunocomplexes were separated by 12% SDS–PAGE and analysed by western blotting with anti-p65, anti-FLAG and anti-IκB-α antibodies. (F) U937 cells (5 × 107) were transfected with siRNA Tat, siRNA p65, siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected. |
| T28294 | 1597-1908 | Sentence | denotes | Twenty-four-hour post-infection, total RNA was analysed for MIP-1α expression by real-time PCR. (G and H) U937 cells (5 × 107) were transfected with siRNA Tat or siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected. |
| T28295 | 1909-1996 | Sentence | denotes | Twenty-four-hour post-infection, ChIP was performed with anti-p65 (G) or anti-FLAG (H). |
| T28296 | 1997-2078 | Sentence | denotes | Real-time PCR was performed with primers specific for MIP-1α and GAPDH promoters. |
| T28297 | 2079-2115 | Sentence | denotes | Values (mean ± SE, n = 3) are shown. |
| T28298 | 2116-2254 | Sentence | denotes | The asterisks indicate statistically significant differences compared to the control (mock), according to the Student's t-test (P < 0.05). |
| T214 | 0-9 | Sentence | denotes | Figure 6. |
| T215 | 10-131 | Sentence | denotes | In HIV-1 infection Tat sustains the NF-κB activity and enhances the MIP-1α expression via interaction with IκB-α and p65. |
| T216 | 132-784 | Sentence | denotes | U937 cells (5 × 107) were transfected with siRNA Tat, siRNA control (2 nmol), or left untransfected; 24 h later cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions (500 ng of p24) and harvested at the indicated time. (A) Real-time PCR of total RNA measured the Tat expression; ELISA measured the amount of p24 in whole cell extracts. (B) The binding of p65 to the NF-κB double-stranded oligonucleotide was measured in nuclear extracts (10 µg) using the NF-κB Transcription Factor ELISA assay kit (Cayman). (C) The IκB-α content was analysed by 12% SDS–PAGE and western blotting of cytosolic extracts (20 µg) using anti-IκB-α antibody. |
| T217 | 785-1114 | Sentence | denotes | Densitometry values (D) of the bands were expressed as fold increase above the control (mock). (D) IKK activity was measured in cytosolic cell extracts (100 µg) using HTScan IKK Kinase Assay (Cell Signaling Technology). (E) U937 cells (5 × 107) were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected. |
| T218 | 1115-1245 | Sentence | denotes | Twenty-four-hour post-infection, cell extracts (1 mg) were immunoprecipitated with protein G-Sepharose-coupled anti-FLAG antibody. |
| T219 | 1246-1596 | Sentence | denotes | Immunocomplexes were separated by 12% SDS–PAGE and analysed by western blotting with anti-p65, anti-FLAG and anti-IκB-α antibodies. (F) U937 cells (5 × 107) were transfected with siRNA Tat, siRNA p65, siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected. |
| T220 | 1597-1908 | Sentence | denotes | Twenty-four-hour post-infection, total RNA was analysed for MIP-1α expression by real-time PCR. (G and H) U937 cells (5 × 107) were transfected with siRNA Tat or siRNA control (2 nmol), or left untransfected; 24 h later, cells were infected with HXB2-pseudotyped NL4-3.FLAG-Tat.R−E− virions, or left uninfected. |
| T221 | 1909-1996 | Sentence | denotes | Twenty-four-hour post-infection, ChIP was performed with anti-p65 (G) or anti-FLAG (H). |
| T222 | 1997-2078 | Sentence | denotes | Real-time PCR was performed with primers specific for MIP-1α and GAPDH promoters. |
| T223 | 2079-2115 | Sentence | denotes | Values (mean ± SE, n = 3) are shown. |
| T224 | 2116-2254 | Sentence | denotes | The asterisks indicate statistically significant differences compared to the control (mock), according to the Student's t-test (P < 0.05). |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T28984 | 29-32 | Protein | denotes | Tat | |
| T28985 | 65-73 | Positive_regulation | denotes | enhances | |
| T28986 | 78-84 | Protein | denotes | MIP-1α | |
| T28987 | 85-95 | Gene_expression | denotes | expression | |
| T28988 | 100-111 | Binding | denotes | interaction | |
| T28989 | 117-122 | Protein | denotes | IκB-α | |
| T28990 | 127-130 | Protein | denotes | p65 | |
| T28991 | 175-184 | Protein | denotes | siRNA Tat | |
| T28992 | 292-300 | Protein | denotes | FLAG-Tat | |
| T28993 | 325-328 | Protein | denotes | p24 | |
| T28994 | 411-414 | Protein | denotes | Tat | |
| T28995 | 415-425 | Gene_expression | denotes | expression | true |
| T28996 | 456-459 | Protein | denotes | p24 | |
| T28997 | 492-499 | Binding | denotes | binding | true |
| T28998 | 503-506 | Protein | denotes | p65 | |
| T28999 | 664-669 | Protein | denotes | IκB-α | |
| T29000 | 1072-1080 | Protein | denotes | FLAG-Tat | |
| T29001 | 1198-1207 | Protein | denotes | protein G | |
| T29002 | 1425-1434 | Protein | denotes | siRNA Tat | |
| T29003 | 1436-1445 | Protein | denotes | siRNA p65 | |
| T29004 | 1554-1562 | Protein | denotes | FLAG-Tat | |
| T29005 | 1657-1663 | Protein | denotes | MIP-1α | |
| T29006 | 1664-1674 | Gene_expression | denotes | expression | true |
| T29007 | 1746-1755 | Protein | denotes | siRNA Tat | |
| T29008 | 1866-1874 | Protein | denotes | FLAG-Tat | |
| T29009 | 2051-2057 | Protein | denotes | MIP-1α | |
| T29010 | 2062-2067 | Protein | denotes | GAPDH | |
| R22632 | T28984 | T28988 | themeOf | Tat,interaction | |
| R22633 | T28986 | T28987 | themeOf | MIP-1α,expression | |
| R22634 | T28987 | T28985 | themeOf | expression,enhances | |
| R22635 | T28988 | T28985 | causeOf | interaction,enhances | |
| R22636 | T28989 | T28988 | themeOf | IκB-α,interaction | |
| R22637 | T28994 | T28995 | themeOf | Tat,expression | |
| R22638 | T28998 | T28997 | themeOf | p65,binding | |
| R22639 | T29005 | T29006 | themeOf | MIP-1α,expression |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29011 | 46-51 | Protein | denotes | NF-κB |
| T29012 | 78-84 | Protein | denotes | MIP-1α |
| T29013 | 117-122 | Protein | denotes | IκB-α |
| T29014 | 127-130 | Protein | denotes | p65 |
| T29015 | 85-95 | Gene_expression | denotes | expression |
| T29016 | 100-111 | Binding | denotes | interaction |
| T29017 | 65-73 | Positive_regulation | denotes | enhances |
| T29018 | 175-184 | Protein | denotes | siRNA Tat |
| T29019 | 325-328 | Protein | denotes | p24 |
| T29020 | 411-414 | Protein | denotes | Tat |
| T29021 | 456-459 | Protein | denotes | p24 |
| T29022 | 415-425 | Gene_expression | denotes | expression |
| T29023 | 503-506 | Protein | denotes | p65 |
| T29024 | 514-519 | Protein | denotes | NF-κB |
| T29025 | 603-608 | Protein | denotes | NF-κB |
| T29026 | 536-551 | Entity | denotes | oligonucleotide |
| T29027 | 492-499 | Binding | denotes | binding |
| T29028 | 664-669 | Protein | denotes | IκB-α |
| T29029 | 764-783 | Protein | denotes | anti-IκB-α antibody |
| T29030 | 758-763 | Gene_expression | denotes | using |
| T29031 | 884-887 | Protein | denotes | IKK |
| T29032 | 952-962 | Protein | denotes | HTScan IKK |
| T29033 | 1198-1244 | Protein | denotes | protein G-Sepharose-coupled anti-FLAG antibody |
| T29034 | 1336-1339 | Protein | denotes | p65 |
| T29035 | 1341-1350 | Protein | denotes | anti-FLAG |
| T29036 | 1355-1376 | Protein | denotes | anti-IκB-α antibodies |
| T29037 | 1425-1434 | Protein | denotes | siRNA Tat |
| T29038 | 1436-1445 | Protein | denotes | siRNA p65 |
| T29039 | 1657-1663 | Protein | denotes | MIP-1α |
| T29040 | 1664-1674 | Gene_expression | denotes | expression |
| T29041 | 1746-1764 | Protein | denotes | siRNA Tat or siRNA |
| T29042 | 2051-2057 | Protein | denotes | MIP-1α |
| T29043 | 2062-2067 | Protein | denotes | GAPDH |
| R22640 | T29012 | T29015 | themeOf | MIP-1α,expression |
| R22641 | T29013 | T29016 | themeOf | IκB-α,interaction |
| R22642 | T29015 | T29017 | themeOf | expression,enhances |
| R22643 | T29016 | T29017 | causeOf | interaction,enhances |
| R22644 | T29020 | T29022 | themeOf | Tat,expression |
| R22645 | T29023 | T29027 | themeOf | p65,binding |
| R22646 | T29024 | T29027 | themeOf | NF-κB,binding |
| R22647 | T29024 | T29026 | partOf | NF-κB,oligonucleotide |
| R22648 | T29026 | T29027 | Site | oligonucleotide,binding |
| R22649 | T29029 | T29030 | themeOf | anti-IκB-α antibody,using |
| R22650 | T29039 | T29040 | themeOf | MIP-1α,expression |
test2
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T28234 | 29-32 | Protein | denotes | Tat | |
| T28235 | 65-73 | Positive_regulation | denotes | enhances | |
| T28236 | 78-84 | Protein | denotes | MIP-1α | |
| T28237 | 85-95 | Gene_expression | denotes | expression | true |
| T28238 | 100-111 | Binding | denotes | interaction | true |
| T28239 | 117-122 | Protein | denotes | IκB-α | true |
| T28240 | 127-130 | Protein | denotes | p65 | |
| T28241 | 175-184 | Protein | denotes | siRNA Tat | |
| T28242 | 292-300 | Protein | denotes | FLAG-Tat | |
| T28243 | 325-328 | Protein | denotes | p24 | |
| T28244 | 411-414 | Protein | denotes | Tat | |
| T28245 | 415-425 | Gene_expression | denotes | expression | |
| T28246 | 456-459 | Protein | denotes | p24 | |
| T28247 | 492-499 | Binding | denotes | binding | |
| T28248 | 503-506 | Protein | denotes | p65 | |
| T28249 | 664-669 | Protein | denotes | IκB-α | |
| T28250 | 1072-1080 | Protein | denotes | FLAG-Tat | |
| T28251 | 1198-1207 | Protein | denotes | protein G | |
| T28252 | 1425-1434 | Protein | denotes | siRNA Tat | |
| T28253 | 1436-1445 | Protein | denotes | siRNA p65 | |
| T28254 | 1554-1562 | Protein | denotes | FLAG-Tat | |
| T28255 | 1657-1663 | Protein | denotes | MIP-1α | |
| T28256 | 1664-1674 | Gene_expression | denotes | expression | |
| T28257 | 1746-1755 | Protein | denotes | siRNA Tat | |
| T28258 | 1866-1874 | Protein | denotes | FLAG-Tat | |
| T28259 | 2051-2057 | Protein | denotes | MIP-1α | |
| T28260 | 2062-2067 | Protein | denotes | GAPDH | |
| T28261 | 2068-2077 | Entity | denotes | promoters | |
| R22120 | T28234 | T28235 | causeOf | Tat,enhances | |
| R22121 | T28234 | T28238 | themeOf | Tat,interaction | |
| R22122 | T28236 | T28237 | themeOf | MIP-1α,expression | |
| R22123 | T28237 | T28235 | themeOf | expression,enhances | |
| R22124 | T28238 | T28235 | causeOf | interaction,enhances | |
| R22125 | T28239 | T28238 | themeOf | IκB-α,interaction | |
| R22126 | T28244 | T28245 | themeOf | Tat,expression | |
| R22127 | T28248 | T28247 | themeOf | p65,binding | |
| R22128 | T28255 | T28256 | themeOf | MIP-1α,expression |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T28262 | 29-32 | Protein | denotes | Tat | |
| T28263 | 65-73 | Positive_regulation | denotes | enhances | |
| T28264 | 78-84 | Protein | denotes | MIP-1α | |
| T28265 | 85-95 | Gene_expression | denotes | expression | |
| T28266 | 100-111 | Binding | denotes | interaction | |
| T28267 | 117-122 | Protein | denotes | IκB-α | |
| T28268 | 127-130 | Protein | denotes | p65 | |
| T28269 | 175-184 | Protein | denotes | siRNA Tat | |
| T28270 | 292-300 | Protein | denotes | FLAG-Tat | |
| T28271 | 325-328 | Protein | denotes | p24 | |
| T28272 | 411-414 | Protein | denotes | Tat | |
| T28273 | 415-425 | Gene_expression | denotes | expression | true |
| T28274 | 456-459 | Protein | denotes | p24 | |
| T28275 | 492-499 | Binding | denotes | binding | true |
| T28276 | 503-506 | Protein | denotes | p65 | |
| T28277 | 664-669 | Protein | denotes | IκB-α | |
| T28278 | 1072-1080 | Protein | denotes | FLAG-Tat | |
| T28279 | 1198-1207 | Protein | denotes | protein G | |
| T28280 | 1425-1434 | Protein | denotes | siRNA Tat | |
| T28281 | 1436-1445 | Protein | denotes | siRNA p65 | |
| T28282 | 1554-1562 | Protein | denotes | FLAG-Tat | |
| T28283 | 1657-1663 | Protein | denotes | MIP-1α | |
| T28284 | 1664-1674 | Gene_expression | denotes | expression | true |
| T28285 | 1746-1755 | Protein | denotes | siRNA Tat | |
| T28286 | 1866-1874 | Protein | denotes | FLAG-Tat | |
| T28287 | 2051-2057 | Protein | denotes | MIP-1α | |
| T28288 | 2062-2067 | Protein | denotes | GAPDH | |
| R22129 | T28262 | T28266 | themeOf | Tat,interaction | |
| R22130 | T28264 | T28265 | themeOf | MIP-1α,expression | |
| R22131 | T28265 | T28263 | themeOf | expression,enhances | |
| R22132 | T28266 | T28263 | causeOf | interaction,enhances | |
| R22133 | T28267 | T28266 | themeOf | IκB-α,interaction | |
| R22134 | T28272 | T28273 | themeOf | Tat,expression | |
| R22135 | T28276 | T28275 | themeOf | p65,binding | |
| R22136 | T28283 | T28284 | themeOf | MIP-1α,expression |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28299 | 29-32 | Q8UMQ1 | denotes | Tat |
| T28300 | 29-32 | P04608 | denotes | Tat |
| T28301 | 29-32 | P04610 | denotes | Tat |
| T28302 | 29-32 | P04605 | denotes | Tat |
| T28303 | 78-84 | P10147 | denotes | MIP-1α |
| T28304 | 127-130 | P21579 | denotes | p65 |
| T28305 | 127-130 | Q04206 | denotes | p65 |
| T28306 | 181-184 | P04608 | denotes | Tat |
| T28307 | 181-184 | P04605 | denotes | Tat |
| T28308 | 181-184 | P04610 | denotes | Tat |
| T28309 | 181-184 | Q8UMQ1 | denotes | Tat |
| T28310 | 297-300 | P04608 | denotes | Tat |
| T28311 | 297-300 | P04610 | denotes | Tat |
| T28312 | 297-300 | Q8UMQ1 | denotes | Tat |
| T28313 | 297-300 | P04605 | denotes | Tat |
| T28314 | 325-328 | P04591 | denotes | p24 |
| T28315 | 325-328 | P12497 | denotes | p24 |
| T28316 | 325-328 | P03366 | denotes | p24 |
| T28317 | 325-328 | P04585 | denotes | p24 |
| T28318 | 411-414 | P04605 | denotes | Tat |
| T28319 | 411-414 | Q8UMQ1 | denotes | Tat |
| T28320 | 411-414 | P04610 | denotes | Tat |
| T28321 | 411-414 | P04608 | denotes | Tat |
| T28322 | 456-459 | P03366 | denotes | p24 |
| T28323 | 456-459 | P12497 | denotes | p24 |
| T28324 | 456-459 | P04591 | denotes | p24 |
| T28325 | 456-459 | P04585 | denotes | p24 |
| T28326 | 503-506 | Q04206 | denotes | p65 |
| T28327 | 503-506 | P21579 | denotes | p65 |
| T28328 | 1077-1080 | Q8UMQ1 | denotes | Tat |
| T28329 | 1077-1080 | P04610 | denotes | Tat |
| T28330 | 1077-1080 | P04608 | denotes | Tat |
| T28331 | 1077-1080 | P04605 | denotes | Tat |
| T28332 | 1336-1339 | Q04206 | denotes | p65 |
| T28333 | 1336-1339 | P21579 | denotes | p65 |
| T28334 | 1431-1434 | P04605 | denotes | Tat |
| T28335 | 1431-1434 | P04608 | denotes | Tat |
| T28336 | 1431-1434 | Q8UMQ1 | denotes | Tat |
| T28337 | 1431-1434 | P04610 | denotes | Tat |
| T28338 | 1442-1445 | Q04206 | denotes | p65 |
| T28339 | 1442-1445 | P21579 | denotes | p65 |
| T28340 | 1559-1562 | Q8UMQ1 | denotes | Tat |
| T28341 | 1559-1562 | P04610 | denotes | Tat |
| T28342 | 1559-1562 | P04605 | denotes | Tat |
| T28343 | 1559-1562 | P04608 | denotes | Tat |
| T28344 | 1657-1663 | P10147 | denotes | MIP-1α |
| T28345 | 1752-1755 | P04608 | denotes | Tat |
| T28346 | 1752-1755 | P04610 | denotes | Tat |
| T28347 | 1752-1755 | P04605 | denotes | Tat |
| T28348 | 1752-1755 | Q8UMQ1 | denotes | Tat |
| T28349 | 1871-1874 | P04608 | denotes | Tat |
| T28350 | 1871-1874 | P04610 | denotes | Tat |
| T28351 | 1871-1874 | Q8UMQ1 | denotes | Tat |
| T28352 | 1871-1874 | P04605 | denotes | Tat |
| T28353 | 1971-1974 | P21579 | denotes | p65 |
| T28354 | 1971-1974 | Q04206 | denotes | p65 |
| T28355 | 2051-2057 | P10147 | denotes | MIP-1α |
| T28356 | 2062-2067 | P04406 | denotes | GAPDH |