PMC:3333881 / 32436-32715 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T27474","span":{"begin":0,"end":9},"obj":"JJ"},{"id":"T27475","span":{"begin":10,"end":13},"obj":"NN"},{"id":"T27476","span":{"begin":14,"end":17},"obj":"VB"},{"id":"T27477","span":{"begin":18,"end":27},"obj":"VB"},{"id":"T27478","span":{"begin":28,"end":32},"obj":"IN"},{"id":"T27479","span":{"begin":33,"end":40},"obj":"NN"},{"id":"T27480","span":{"begin":41,"end":49},"obj":"JJ"},{"id":"T27481","span":{"begin":50,"end":53},"obj":"IN"},{"id":"T27482","span":{"begin":54,"end":57},"obj":"DT"},{"id":"T27483","span":{"begin":58,"end":67},"obj":"VB"},{"id":"T27484","span":{"begin":68,"end":78},"obj":"NN"},{"id":"T27485","span":{"begin":79,"end":80},"obj":"-LRB-"},{"id":"T27486","span":{"begin":80,"end":81},"obj":"NN"},{"id":"T27487","span":{"begin":81,"end":82},"obj":"-RRB-"},{"id":"T27488","span":{"begin":83,"end":87},"obj":"NN"},{"id":"T27489","span":{"begin":88,"end":93},"obj":"NN"},{"id":"T27490","span":{"begin":94,"end":95},"obj":"-LRB-"},{"id":"T27491","span":{"begin":95,"end":102},"obj":"CD"},{"id":"T27492","span":{"begin":102,"end":103},"obj":"-RRB-"},{"id":"T27493","span":{"begin":104,"end":108},"obj":"VB"},{"id":"T27494","span":{"begin":109,"end":120},"obj":"VB"},{"id":"T27495","span":{"begin":121,"end":125},"obj":"IN"},{"id":"T27496","span":{"begin":126,"end":131},"obj":"JJ"},{"id":"T27497","span":{"begin":132,"end":138},"obj":"NN"},{"id":"T27498","span":{"begin":138,"end":139},"obj":"-COMMA-"},{"id":"T27499","span":{"begin":140,"end":151},"obj":"NN"},{"id":"T27500","span":{"begin":152,"end":153},"obj":"-LRB-"},{"id":"T27501","span":{"begin":153,"end":158},"obj":"NN"},{"id":"T27502","span":{"begin":158,"end":159},"obj":"-RRB-"},{"id":"T27503","span":{"begin":159,"end":160},"obj":"-COMMA-"},{"id":"T27504","span":{"begin":161,"end":163},"obj":"CC"},{"id":"T27505","span":{"begin":164,"end":169},"obj":"JJ"},{"id":"T27506","span":{"begin":170,"end":176},"obj":"NN"},{"id":"T27507","span":{"begin":177,"end":181},"obj":"CC"},{"id":"T27508","span":{"begin":182,"end":187},"obj":"NN"},{"id":"T27509","span":{"begin":188,"end":193},"obj":"NN"},{"id":"T27510","span":{"begin":194,"end":196},"obj":"CC"},{"id":"T27511","span":{"begin":197,"end":202},"obj":"NN"},{"id":"T27512","span":{"begin":203,"end":210},"obj":"NN"},{"id":"T27513","span":{"begin":211,"end":212},"obj":"-LRB-"},{"id":"T27514","span":{"begin":212,"end":220},"obj":"NN"},{"id":"T27515","span":{"begin":220,"end":221},"obj":"-RRB-"},{"id":"T27516","span":{"begin":221,"end":222},"obj":"-COLON-"},{"id":"T27517","span":{"begin":223,"end":227},"obj":"NN"},{"id":"T27518","span":{"begin":228,"end":233},"obj":"RB"},{"id":"T27519","span":{"begin":233,"end":234},"obj":"-COMMA-"},{"id":"T27520","span":{"begin":235,"end":239},"obj":"NN"},{"id":"T27521","span":{"begin":240,"end":243},"obj":"VB"},{"id":"T27522","span":{"begin":244,"end":253},"obj":"VB"},{"id":"T27523","span":{"begin":254,"end":258},"obj":"IN"},{"id":"T27524","span":{"begin":259,"end":269},"obj":"JJ"},{"id":"T27525","span":{"begin":270,"end":278},"obj":"NN"}],"relations":[{"id":"R21575","pred":"arg1Of","subj":"T27475","obj":"T27474"},{"id":"R21576","pred":"arg1Of","subj":"T27475","obj":"T27476"},{"id":"R21577","pred":"arg2Of","subj":"T27475","obj":"T27477"},{"id":"R21578","pred":"arg2Of","subj":"T27477","obj":"T27476"},{"id":"R21579","pred":"arg1Of","subj":"T27477","obj":"T27478"},{"id":"R21580","pred":"arg2Of","subj":"T27479","obj":"T27478"},{"id":"R21581","pred":"arg1Of","subj":"T27479","obj":"T27480"},{"id":"R21582","pred":"arg1Of","subj":"T27480","obj":"T27481"},{"id":"R21583","pred":"arg2Of","subj":"T27484","obj":"T27481"},{"id":"R21584","pred":"arg1Of","subj":"T27484","obj":"T27482"},{"id":"R21585","pred":"arg2Of","subj":"T27484","obj":"T27483"},{"id":"R21586","pred":"arg1Of","subj":"T27484","obj":"T27485"},{"id":"R21587","pred":"arg2Of","subj":"T27486","obj":"T27485"},{"id":"R21588","pred":"arg3Of","subj":"T27487","obj":"T27485"},{"id":"R21589","pred":"arg1Of","subj":"T27489","obj":"T27488"},{"id":"R21590","pred":"arg1Of","subj":"T27489","obj":"T27490"},{"id":"R21591","pred":"arg1Of","subj":"T27489","obj":"T27493"},{"id":"R21592","pred":"arg2Of","subj":"T27489","obj":"T27494"},{"id":"R21593","pred":"arg2Of","subj":"T27491","obj":"T27490"},{"id":"R21594","pred":"arg3Of","subj":"T27492","obj":"T27490"},{"id":"R21595","pred":"modOf","subj":"T27494","obj":"T27476"},{"id":"R21596","pred":"arg2Of","subj":"T27494","obj":"T27493"},{"id":"R21597","pred":"arg1Of","subj":"T27494","obj":"T27495"},{"id":"R21598","pred":"arg1Of","subj":"T27494","obj":"T27516"},{"id":"R21599","pred":"arg1Of","subj":"T27497","obj":"T27496"},{"id":"R21600","pred":"arg1Of","subj":"T27497","obj":"T27498"},{"id":"R21601","pred":"arg1Of","subj":"T27498","obj":"T27504"},{"id":"R21602","pred":"arg2Of","subj":"T27499","obj":"T27498"},{"id":"R21603","pred":"arg1Of","subj":"T27499","obj":"T27500"},{"id":"R21604","pred":"arg2Of","subj":"T27501","obj":"T27500"},{"id":"R21605","pred":"arg3Of","subj":"T27502","obj":"T27500"},{"id":"R21606","pred":"arg1Of","subj":"T27504","obj":"T27503"},{"id":"R21607","pred":"arg1Of","subj":"T27504","obj":"T27510"},{"id":"R21608","pred":"arg1Of","subj":"T27506","obj":"T27505"},{"id":"R21609","pred":"arg1Of","subj":"T27506","obj":"T27507"},{"id":"R21610","pred":"arg2Of","subj":"T27507","obj":"T27504"},{"id":"R21611","pred":"arg2Of","subj":"T27509","obj":"T27507"},{"id":"R21612","pred":"arg1Of","subj":"T27509","obj":"T27508"},{"id":"R21613","pred":"arg2Of","subj":"T27510","obj":"T27495"},{"id":"R21614","pred":"arg2Of","subj":"T27512","obj":"T27510"},{"id":"R21615","pred":"arg1Of","subj":"T27512","obj":"T27511"},{"id":"R21616","pred":"arg1Of","subj":"T27512","obj":"T27513"},{"id":"R21617","pred":"arg2Of","subj":"T27514","obj":"T27513"},{"id":"R21618","pred":"arg3Of","subj":"T27515","obj":"T27513"},{"id":"R21619","pred":"arg1Of","subj":"T27518","obj":"T27517"},{"id":"R21620","pred":"arg1Of","subj":"T27520","obj":"T27521"},{"id":"R21621","pred":"arg2Of","subj":"T27520","obj":"T27522"},{"id":"R21622","pred":"arg2Of","subj":"T27522","obj":"T27516"},{"id":"R21623","pred":"arg1Of","subj":"T27522","obj":"T27518"},{"id":"R21624","pred":"arg1Of","subj":"T27522","obj":"T27519"},{"id":"R21625","pred":"arg2Of","subj":"T27522","obj":"T27521"},{"id":"R21626","pred":"arg1Of","subj":"T27522","obj":"T27523"},{"id":"R21627","pred":"arg2Of","subj":"T27525","obj":"T27523"},{"id":"R21628","pred":"arg1Of","subj":"T27525","obj":"T27524"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T27860","span":{"begin":0,"end":9},"obj":"JJ"},{"id":"T27861","span":{"begin":10,"end":13},"obj":"NNP"},{"id":"T27862","span":{"begin":14,"end":17},"obj":"VBD"},{"id":"T27863","span":{"begin":18,"end":27},"obj":"VBN"},{"id":"T27864","span":{"begin":28,"end":32},"obj":"IN"},{"id":"T27865","span":{"begin":33,"end":40},"obj":"NNS"},{"id":"T27866","span":{"begin":41,"end":49},"obj":"JJ"},{"id":"T27867","span":{"begin":50,"end":53},"obj":"IN"},{"id":"T27868","span":{"begin":54,"end":57},"obj":"DT"},{"id":"T27869","span":{"begin":58,"end":67},"obj":"VBN"},{"id":"T27870","span":{"begin":68,"end":77},"obj":"NNS"},{"id":"T27871","span":{"begin":77,"end":78},"obj":"."},{"id":"T27872","span":{"begin":79,"end":80},"obj":"-LRB-"},{"id":"T27873","span":{"begin":80,"end":81},"obj":"NNP"},{"id":"T27874","span":{"begin":81,"end":82},"obj":"-RRB-"},{"id":"T27875","span":{"begin":83,"end":87},"obj":"NNP"},{"id":"T27876","span":{"begin":88,"end":93},"obj":"NNS"},{"id":"T27877","span":{"begin":94,"end":95},"obj":"-LRB-"},{"id":"T27878","span":{"begin":95,"end":96},"obj":"CD"},{"id":"T27879","span":{"begin":97,"end":98},"obj":"CD"},{"id":"T27880","span":{"begin":99,"end":102},"obj":"CD"},{"id":"T27881","span":{"begin":102,"end":103},"obj":"-RRB-"},{"id":"T27882","span":{"begin":104,"end":108},"obj":"VBD"},{"id":"T27883","span":{"begin":109,"end":120},"obj":"VBN"},{"id":"T27884","span":{"begin":121,"end":125},"obj":"IN"},{"id":"T27885","span":{"begin":126,"end":131},"obj":"JJ"},{"id":"T27886","span":{"begin":132,"end":138},"obj":"NN"},{"id":"T27887","span":{"begin":138,"end":139},"obj":","},{"id":"T27888","span":{"begin":140,"end":151},"obj":"NN"},{"id":"T27889","span":{"begin":152,"end":153},"obj":"-LRB-"},{"id":"T27890","span":{"begin":153,"end":155},"obj":"CD"},{"id":"T27891","span":{"begin":156,"end":158},"obj":"NN"},{"id":"T27892","span":{"begin":158,"end":159},"obj":"-RRB-"},{"id":"T27893","span":{"begin":159,"end":160},"obj":","},{"id":"T27894","span":{"begin":161,"end":163},"obj":"CC"},{"id":"T27895","span":{"begin":164,"end":169},"obj":"JJ"},{"id":"T27896","span":{"begin":170,"end":176},"obj":"NN"},{"id":"T27897","span":{"begin":177,"end":181},"obj":"CC"},{"id":"T27898","span":{"begin":182,"end":187},"obj":"NNP"},{"id":"T27899","span":{"begin":188,"end":193},"obj":"NNP"},{"id":"T27900","span":{"begin":194,"end":196},"obj":"CC"},{"id":"T27901","span":{"begin":197,"end":202},"obj":"NNP"},{"id":"T27902","span":{"begin":203,"end":210},"obj":"NN"},{"id":"T27903","span":{"begin":211,"end":212},"obj":"-LRB-"},{"id":"T27904","span":{"begin":212,"end":215},"obj":"CD"},{"id":"T27905","span":{"begin":216,"end":220},"obj":"NN"},{"id":"T27906","span":{"begin":220,"end":221},"obj":"-RRB-"},{"id":"T27907","span":{"begin":221,"end":222},"obj":":"},{"id":"T27908","span":{"begin":223,"end":225},"obj":"CD"},{"id":"T27909","span":{"begin":226,"end":227},"obj":"NN"},{"id":"T27910","span":{"begin":228,"end":233},"obj":"RB"},{"id":"T27911","span":{"begin":233,"end":234},"obj":","},{"id":"T27912","span":{"begin":235,"end":239},"obj":"NNP"},{"id":"T27913","span":{"begin":240,"end":243},"obj":"VBD"},{"id":"T27914","span":{"begin":244,"end":253},"obj":"VBN"},{"id":"T27915","span":{"begin":254,"end":258},"obj":"IN"},{"id":"T27916","span":{"begin":259,"end":269},"obj":"JJ"},{"id":"T27917","span":{"begin":270,"end":278},"obj":"NN"},{"id":"T27918","span":{"begin":278,"end":279},"obj":"."}],"relations":[{"id":"R21903","pred":"compound","subj":"T27860","obj":"T27861"},{"id":"R21904","pred":"nsubjpass","subj":"T27861","obj":"T27863"},{"id":"R21905","pred":"auxpass","subj":"T27862","obj":"T27863"},{"id":"R21906","pred":"ROOT","subj":"T27863","obj":"T27863"},{"id":"R21907","pred":"prep","subj":"T27864","obj":"T27863"},{"id":"R21908","pred":"pobj","subj":"T27865","obj":"T27864"},{"id":"R21909","pred":"amod","subj":"T27866","obj":"T27865"},{"id":"R21910","pred":"prep","subj":"T27867","obj":"T27866"},{"id":"R21911","pred":"det","subj":"T27868","obj":"T27870"},{"id":"R21912","pred":"amod","subj":"T27869","obj":"T27870"},{"id":"R21913","pred":"pobj","subj":"T27870","obj":"T27867"},{"id":"R21914","pred":"punct","subj":"T27871","obj":"T27863"},{"id":"R21915","pred":"punct","subj":"T27872","obj":"T27883"},{"id":"R21916","pred":"compound","subj":"T27873","obj":"T27876"},{"id":"R21917","pred":"punct","subj":"T27874","obj":"T27875"},{"id":"R21918","pred":"compound","subj":"T27875","obj":"T27876"},{"id":"R21919","pred":"nsubjpass","subj":"T27876","obj":"T27883"},{"id":"R21920","pred":"punct","subj":"T27877","obj":"T27876"},{"id":"R21921","pred":"nummod","subj":"T27878","obj":"T27880"},{"id":"R21922","pred":"nummod","subj":"T27879","obj":"T27880"},{"id":"R21923","pred":"appos","subj":"T27880","obj":"T27876"},{"id":"R21924","pred":"punct","subj":"T27881","obj":"T27876"},{"id":"R21925","pred":"auxpass","subj":"T27882","obj":"T27883"},{"id":"R21926","pred":"advcl","subj":"T27883","obj":"T27914"},{"id":"R21927","pred":"prep","subj":"T27884","obj":"T27883"},{"id":"R21928","pred":"amod","subj":"T27885","obj":"T27886"},{"id":"R21929","pred":"pobj","subj":"T27886","obj":"T27884"},{"id":"R21930","pred":"punct","subj":"T27887","obj":"T27886"},{"id":"R21931","pred":"conj","subj":"T27888","obj":"T27886"},{"id":"R21932","pred":"punct","subj":"T27889","obj":"T27888"},{"id":"R21933","pred":"nummod","subj":"T27890","obj":"T27891"},{"id":"R21934","pred":"appos","subj":"T27891","obj":"T27888"},{"id":"R21935","pred":"punct","subj":"T27892","obj":"T27888"},{"id":"R21936","pred":"punct","subj":"T27893","obj":"T27888"},{"id":"R21937","pred":"cc","subj":"T27894","obj":"T27888"},{"id":"R21938","pred":"amod","subj":"T27895","obj":"T27896"},{"id":"R21939","pred":"conj","subj":"T27896","obj":"T27888"},{"id":"R21940","pred":"cc","subj":"T27897","obj":"T27896"},{"id":"R21941","pred":"compound","subj":"T27898","obj":"T27899"},{"id":"R21942","pred":"conj","subj":"T27899","obj":"T27896"},{"id":"R21943","pred":"cc","subj":"T27900","obj":"T27899"},{"id":"R21944","pred":"compound","subj":"T27901","obj":"T27902"},{"id":"R21945","pred":"conj","subj":"T27902","obj":"T27899"},{"id":"R21946","pred":"punct","subj":"T27903","obj":"T27902"},{"id":"R21947","pred":"nummod","subj":"T27904","obj":"T27905"},{"id":"R21948","pred":"appos","subj":"T27905","obj":"T27902"},{"id":"R21949","pred":"punct","subj":"T27906","obj":"T27902"},{"id":"R21950","pred":"punct","subj":"T27907","obj":"T27899"},{"id":"R21951","pred":"nummod","subj":"T27908","obj":"T27909"},{"id":"R21952","pred":"npadvmod","subj":"T27909","obj":"T27910"},{"id":"R21953","pred":"conj","subj":"T27910","obj":"T27899"},{"id":"R21954","pred":"punct","subj":"T27911","obj":"T27914"},{"id":"R21955","pred":"nsubjpass","subj":"T27912","obj":"T27914"},{"id":"R21956","pred":"auxpass","subj":"T27913","obj":"T27914"},{"id":"R21957","pred":"ROOT","subj":"T27914","obj":"T27914"},{"id":"R21958","pred":"prep","subj":"T27915","obj":"T27914"},{"id":"R21959","pred":"amod","subj":"T27916","obj":"T27917"},{"id":"R21960","pred":"pobj","subj":"T27917","obj":"T27915"},{"id":"R21961","pred":"punct","subj":"T27918","obj":"T27914"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T27984","span":{"begin":270,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0003823"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T27974","span":{"begin":88,"end":93},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T27977","span":{"begin":270,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0019815"},{"id":"T27980","span":{"begin":270,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0042571"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    sentences

    {"project":"sentences","denotations":[{"id":"T27262","span":{"begin":0,"end":279},"obj":"Sentence"},{"id":"T194","span":{"begin":0,"end":279},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T28177","span":{"begin":148,"end":151},"obj":"Protein"},{"id":"T28178","span":{"begin":182,"end":193},"obj":"Protein"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T28205","span":{"begin":188,"end":193},"obj":"Protein"},{"id":"T28206","span":{"begin":259,"end":278},"obj":"Protein"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    test2

    {"project":"test2","denotations":[{"id":"T27221","span":{"begin":148,"end":151},"obj":"Protein"},{"id":"T27222","span":{"begin":182,"end":193},"obj":"Protein"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T27256","span":{"begin":148,"end":151},"obj":"Protein"},{"id":"T27257","span":{"begin":182,"end":193},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T27617","span":{"begin":148,"end":151},"obj":"P04610"},{"id":"T27618","span":{"begin":148,"end":151},"obj":"Q8UMQ1"},{"id":"T27619","span":{"begin":148,"end":151},"obj":"P04608"},{"id":"T27620","span":{"begin":148,"end":151},"obj":"P04605"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Real-time PCR was performed with primers specific for the indicated promoters. (J) HeLa cells (5 × 106) were transfected with empty vector, p3xFLAG-Tat (10 µg), or empty vector plus siRNA IκB-α or siRNA control (200 pmol); 48 h later, ChIP was performed with anti-IκB-α antibody."}