PMC:3333881 / 0-138
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T142 | 0-5 | JJ | denotes | Human |
T143 | 6-22 | NN | denotes | immunodeficiency |
T144 | 23-30 | NN | denotes | virus-1 |
T145 | 31-34 | NN | denotes | Tat |
T146 | 35-44 | VB | denotes | activates |
T147 | 45-50 | NN | denotes | NF-κB |
T148 | 51-54 | IN | denotes | via |
T149 | 55-63 | JJ | denotes | physical |
T150 | 64-75 | NN | denotes | interaction |
T151 | 76-80 | IN | denotes | with |
T152 | 81-86 | NN | denotes | IκB-α |
T153 | 87-90 | CC | denotes | and |
T154 | 91-94 | NN | denotes | p65 |
T155 | 106-113 | JJ | denotes | Nuclear |
T156 | 114-120 | NN | denotes | factor |
T157 | 121-122 | -LRB- | denotes | ( |
T158 | 122-124 | NN | denotes | NF |
T159 | 124-125 | -RRB- | denotes | ) |
T160 | 125-128 | NN | denotes | -κB |
T161 | 129-131 | VB | denotes | is |
T162 | 132-133 | DT | denotes | a |
R74 | T145 | T142 | arg1Of | Tat,Human |
R75 | T145 | T143 | arg1Of | Tat,immunodeficiency |
R76 | T145 | T144 | arg1Of | Tat,virus-1 |
R77 | T145 | T146 | arg1Of | Tat,activates |
R78 | T146 | T148 | arg1Of | activates,via |
R79 | T147 | T146 | arg2Of | NF-κB,activates |
R80 | T150 | T148 | arg2Of | interaction,via |
R81 | T150 | T149 | arg1Of | interaction,physical |
R82 | T150 | T151 | arg1Of | interaction,with |
R83 | T152 | T153 | arg1Of | IκB-α,and |
R84 | T153 | T151 | arg2Of | and,with |
R85 | T154 | T153 | arg2Of | p65,and |
R86 | T156 | T155 | arg1Of | factor,Nuclear |
R87 | T156 | T157 | arg1Of | factor,( |
R88 | T158 | T157 | arg2Of | NF,( |
R89 | T159 | T157 | arg3Of | ),( |
R90 | T160 | T156 | arg1Of | -κB,factor |
R91 | T160 | T161 | arg1Of | -κB,is |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T402 | 0-5 | JJ | denotes | Human |
T403 | 6-22 | NN | denotes | immunodeficiency |
T404 | 23-30 | JJ | denotes | virus-1 |
T405 | 31-34 | NNP | denotes | Tat |
T406 | 35-44 | VBZ | denotes | activates |
T407 | 45-50 | NNP | denotes | NF-κB |
T408 | 51-54 | IN | denotes | via |
T409 | 55-63 | JJ | denotes | physical |
T410 | 64-75 | NN | denotes | interaction |
T411 | 76-80 | IN | denotes | with |
T412 | 81-86 | NNP | denotes | IκB-α |
T413 | 87-90 | CC | denotes | and |
T414 | 91-94 | CD | denotes | p65 |
T415 | 106-113 | JJ | denotes | Nuclear |
T416 | 114-120 | NN | denotes | factor |
T417 | 121-122 | -LRB- | denotes | ( |
T418 | 122-124 | NNP | denotes | NF |
T419 | 124-125 | -RRB- | denotes | ) |
T420 | 125-126 | : | denotes | - |
T421 | 126-128 | NN | denotes | κB |
T422 | 129-131 | VBZ | denotes | is |
T423 | 132-133 | DT | denotes | a |
R293 | T402 | T403 | amod | Human,immunodeficiency |
R294 | T403 | T405 | compound | immunodeficiency,Tat |
R295 | T404 | T405 | compound | virus-1,Tat |
R296 | T405 | T406 | nsubj | Tat,activates |
R297 | T406 | T422 | ccomp | activates,is |
R298 | T407 | T406 | dobj | NF-κB,activates |
R299 | T408 | T406 | prep | via,activates |
R300 | T409 | T410 | amod | physical,interaction |
R301 | T410 | T408 | pobj | interaction,via |
R302 | T411 | T410 | prep | with,interaction |
R303 | T412 | T411 | pobj | IκB-α,with |
R304 | T413 | T412 | cc | and,IκB-α |
R305 | T414 | T416 | nummod | p65,factor |
R306 | T415 | T416 | amod | Nuclear,factor |
R307 | T416 | T410 | conj | factor,interaction |
R308 | T417 | T410 | punct | (,interaction |
R309 | T418 | T406 | npadvmod | NF,activates |
R310 | T419 | T418 | punct | ),NF |
R311 | T420 | T422 | punct | -,is |
R312 | T421 | T422 | nsubj | κB,is |
R313 | T422 | T422 | ROOT | is,is |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T633 | 35-50 | http://purl.obolibrary.org/obo/GO_0051092 | denotes | activates NF-κB |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T89 | 0-94 | Sentence | denotes | Human immunodeficiency virus-1 Tat activates NF-κB via physical interaction with IκB-α and p65 |
T1 | 0-94 | Sentence | denotes | Human immunodeficiency virus-1 Tat activates NF-κB via physical interaction with IκB-α and p65 |
T2 | 97-105 | Sentence | denotes | Abstract |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T638 | 6-22 | http://purl.bioontology.org/ontology/ICD10/D84.9 | denotes | immunodeficiency |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T858 | 31-34 | Protein | denotes | Tat |
T859 | 64-75 | Binding | denotes | interaction |
T860 | 81-86 | Protein | denotes | IκB-α |
T861 | 91-94 | Protein | denotes | p65 |
R741 | T858 | T859 | themeOf | Tat,interaction |
R742 | T860 | T859 | themeOf | IκB-α,interaction |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T903 | 31-34 | Protein | denotes | Tat |
T904 | 45-50 | Protein | denotes | NF-κB |
T905 | 81-86 | Protein | denotes | IκB-α |
T906 | 35-44 | Positive_regulation | denotes | activates |
T907 | 64-75 | Binding | denotes | interaction |
T908 | 35-44 | Positive_regulation | denotes | activates |
T909 | 126-128 | Protein | denotes | κB |
R631 | T903 | T906 | causeOf | Tat,activates |
R632 | T903 | T908 | causeOf | Tat,activates |
R633 | T904 | T906 | themeOf | NF-κB,activates |
R634 | T905 | T907 | themeOf | IκB-α,interaction |
R635 | T907 | T908 | themeOf | interaction,activates |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T46 | 31-34 | Protein | denotes | Tat |
T47 | 64-75 | Binding | denotes | interaction |
T48 | 81-86 | Protein | denotes | IκB-α |
T49 | 91-94 | Protein | denotes | p65 |
R654 | T46 | T47 | themeOf | Tat,interaction |
R655 | T48 | T47 | themeOf | IκB-α,interaction |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T97 | 64-75 | Binding | denotes | interaction |
T117 | 31-34 | Protein | denotes | Tat |
T127 | 81-86 | Protein | denotes | IκB-α |
T133 | 91-94 | Protein | denotes | p65 |
R51 | T117 | T97 | themeOf | Tat,interaction |
R61 | T127 | T97 | themeOf | IκB-α,interaction |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T358 | 31-34 | P04608 | denotes | Tat |
T359 | 31-34 | P04605 | denotes | Tat |
T360 | 31-34 | P04610 | denotes | Tat |
T361 | 31-34 | Q8UMQ1 | denotes | Tat |
T362 | 91-94 | P21579 | denotes | p65 |
T363 | 91-94 | Q04206 | denotes | p65 |