PMC:3320587 / 779-994
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T325 | 205-206 | -COMMA- | denotes | , |
| T324 | 194-205 | RB | denotes | Furthermore |
| T323 | 189-192 | NN | denotes | MTb |
| T322 | 186-188 | IN | denotes | by |
| T321 | 174-185 | NN | denotes | replication |
| T320 | 168-173 | NN | denotes | HIV-1 |
| T319 | 165-167 | IN | denotes | of |
| T318 | 155-164 | NN | denotes | induction |
| T317 | 146-154 | JJ | denotes | efficent |
| T316 | 142-145 | IN | denotes | for |
| T315 | 133-141 | VB | denotes | required |
| T314 | 130-132 | VB | denotes | is |
| T313 | 123-129 | NN | denotes | clones |
| T312 | 113-122 | JJ | denotes | molecular |
| T311 | 111-112 | NN | denotes | C |
| T310 | 103-110 | NN | denotes | subtype |
| T309 | 99-102 | CC | denotes | and |
| T308 | 97-98 | NN | denotes | B |
| T307 | 89-96 | NN | denotes | subtype |
| T306 | 83-88 | NN | denotes | HIV-1 |
| T305 | 73-82 | JJ | denotes | R5-tropic |
| T304 | 70-72 | IN | denotes | of |
| T303 | 61-69 | NN | denotes | promoter |
| T302 | 55-60 | JJ | denotes | viral |
| T301 | 51-54 | DT | denotes | the |
| T300 | 48-50 | IN | denotes | in |
| T299 | 43-47 | NN | denotes | site |
| T298 | 35-42 | NN | denotes | binding |
| T297 | 29-34 | NN | denotes | NFAT5 |
| T296 | 22-28 | JJ | denotes | intact |
| T295 | 19-21 | DT | denotes | an |
| T294 | 14-18 | IN | denotes | that |
| T293 | 10-13 | CC | denotes | and |
| T292 | 8-9 | -COMMA- | denotes | , |
| T291 | 2-8 | NN | denotes | ligand |
| T290 | 0-1 | -RRB- | denotes | ) |
| R122 | T293 | T292 | arg1Of | and,"," |
| R123 | T294 | T293 | arg2Of | that,and |
| R124 | T299 | T295 | arg1Of | site,an |
| R125 | T299 | T296 | arg1Of | site,intact |
| R126 | T299 | T297 | arg1Of | site,NFAT5 |
| R127 | T299 | T298 | arg1Of | site,binding |
| R128 | T299 | T300 | arg1Of | site,in |
| R129 | T299 | T314 | arg1Of | site,is |
| R130 | T299 | T315 | arg2Of | site,required |
| R131 | T303 | T300 | arg2Of | promoter,in |
| R132 | T303 | T301 | arg1Of | promoter,the |
| R133 | T303 | T302 | arg1Of | promoter,viral |
| R134 | T303 | T304 | arg1Of | promoter,of |
| R135 | T308 | T309 | arg1Of | B,and |
| R136 | T310 | T309 | arg2Of | subtype,and |
| R137 | T313 | T304 | arg2Of | clones,of |
| R138 | T313 | T305 | arg1Of | clones,R5-tropic |
| R139 | T313 | T306 | arg1Of | clones,HIV-1 |
| R140 | T313 | T307 | arg1Of | clones,subtype |
| R141 | T313 | T308 | arg1Of | clones,B |
| R142 | T313 | T310 | arg1Of | clones,subtype |
| R143 | T313 | T311 | arg1Of | clones,C |
| R144 | T313 | T312 | arg1Of | clones,molecular |
| R145 | T315 | T294 | arg2Of | required,that |
| R146 | T315 | T314 | arg2Of | required,is |
| R147 | T315 | T316 | arg1Of | required,for |
| R148 | T318 | T316 | arg2Of | induction,for |
| R149 | T318 | T317 | arg1Of | induction,efficent |
| R150 | T318 | T319 | arg1Of | induction,of |
| R151 | T318 | T322 | arg1Of | induction,by |
| R152 | T321 | T319 | arg2Of | replication,of |
| R153 | T321 | T320 | arg1Of | replication,HIV-1 |
| R154 | T323 | T322 | arg2Of | MTb,by |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T414 | 29-34 | http://www.uniprot.org/uniprot/O94916 | denotes | NFAT5 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T117 | 2-8 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligand |
| T118 | 35-42 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T456 | 133-141 | Positive_regulation | denotes | required |
| T457 | 155-164 | Positive_regulation | denotes | induction |
| R519 | T457 | T456 | themeOf | induction,required |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T823 | 19-47 | Binding | denotes | an intact NFAT5 binding site |
| T782 | 51-96 | Entity | denotes | the viral promoter of R5-tropic HIV-1 subtype |
| T787 | 186-192 | Protein | denotes | by MTb |
| T788 | 29-34 | Protein | denotes | NFAT5 |
| T790 | 19-47 | Entity | denotes | an intact NFAT5 binding site |
| R600 | T790 | T823 | themeOf | an intact NFAT5 binding site,an intact NFAT5 binding site |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T647 | 97-98 | NNP | denotes | B |
| T646 | 89-96 | NN | denotes | subtype |
| T645 | 83-88 | NN | denotes | HIV-1 |
| T644 | 73-82 | JJ | denotes | R5-tropic |
| T643 | 70-72 | IN | denotes | of |
| T642 | 61-69 | NN | denotes | promoter |
| T641 | 55-60 | JJ | denotes | viral |
| T640 | 51-54 | DT | denotes | the |
| T639 | 48-50 | IN | denotes | in |
| T638 | 43-47 | NN | denotes | site |
| T637 | 35-42 | JJ | denotes | binding |
| T636 | 29-34 | NNP | denotes | NFAT5 |
| T635 | 22-28 | JJ | denotes | intact |
| T634 | 19-21 | DT | denotes | an |
| T633 | 14-18 | IN | denotes | that |
| T632 | 10-13 | CC | denotes | and |
| T631 | 8-9 | , | denotes | , |
| T630 | 2-8 | NN | denotes | ligand |
| T629 | 0-1 | -RRB- | denotes | ) |
| T648 | 99-102 | CC | denotes | and |
| T649 | 103-110 | JJ | denotes | subtype |
| T650 | 111-112 | NNP | denotes | C |
| T651 | 113-122 | JJ | denotes | molecular |
| T652 | 123-129 | NNS | denotes | clones |
| T653 | 130-132 | VBZ | denotes | is |
| T654 | 133-141 | VBN | denotes | required |
| T655 | 142-145 | IN | denotes | for |
| T656 | 146-154 | JJ | denotes | efficent |
| T657 | 155-164 | NN | denotes | induction |
| T658 | 165-167 | IN | denotes | of |
| T659 | 168-173 | JJ | denotes | HIV-1 |
| T660 | 174-185 | NN | denotes | replication |
| T661 | 186-188 | IN | denotes | by |
| T662 | 189-192 | NNP | denotes | MTb |
| T663 | 192-193 | . | denotes | . |
| T664 | 194-205 | RB | denotes | Furthermore |
| T665 | 205-206 | , | denotes | , |
| R365 | T631 | T630 | punct | ",",ligand |
| R367 | T633 | T654 | mark | that,required |
| R368 | T634 | T638 | det | an,site |
| R369 | T635 | T638 | amod | intact,site |
| R370 | T636 | T638 | nmod | NFAT5,site |
| R371 | T637 | T638 | amod | binding,site |
| R372 | T638 | T654 | nsubjpass | site,required |
| R373 | T639 | T638 | prep | in,site |
| R374 | T640 | T642 | det | the,promoter |
| R375 | T641 | T642 | amod | viral,promoter |
| R376 | T642 | T639 | pobj | promoter,in |
| R377 | T643 | T642 | prep | of,promoter |
| R378 | T644 | T647 | nmod | R5-tropic,B |
| R379 | T645 | T647 | nmod | HIV-1,B |
| R380 | T646 | T647 | compound | subtype,B |
| R381 | T647 | T652 | nmod | B,clones |
| R546 | T648 | T647 | cc | and,B |
| R547 | T649 | T652 | amod | subtype,clones |
| R548 | T650 | T652 | nmod | C,clones |
| R549 | T651 | T652 | amod | molecular,clones |
| R550 | T652 | T643 | pobj | clones,of |
| R551 | T653 | T654 | auxpass | is,required |
| R553 | T655 | T654 | prep | for,required |
| R554 | T656 | T657 | amod | efficent,induction |
| R555 | T657 | T655 | pobj | induction,for |
| R556 | T658 | T657 | prep | of,induction |
| R557 | T659 | T660 | compound | HIV-1,replication |
| R558 | T660 | T658 | pobj | replication,of |
| R559 | T661 | T657 | prep | by,induction |
| R560 | T662 | T661 | pobj | MTb,by |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T132 | 29-47 | Protein | denotes | NFAT5 binding site |