PMC:3320587 / 39509-39740 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T14053","span":{"begin":218,"end":230},"obj":"NN"},{"id":"T14052","span":{"begin":214,"end":217},"obj":"NN"},{"id":"T14051","span":{"begin":211,"end":213},"obj":"TO"},{"id":"T14050","span":{"begin":202,"end":210},"obj":"NN"},{"id":"T14049","span":{"begin":199,"end":201},"obj":"IN"},{"id":"T14048","span":{"begin":187,"end":198},"obj":"NN"},{"id":"T14047","span":{"begin":181,"end":186},"obj":"NN"},{"id":"T14046","span":{"begin":173,"end":180},"obj":"VB"},{"id":"T14045","span":{"begin":169,"end":172},"obj":"NN"},{"id":"T14044","span":{"begin":165,"end":168},"obj":"DT"},{"id":"T14043","span":{"begin":162,"end":164},"obj":"TO"},{"id":"T14042","span":{"begin":154,"end":161},"obj":"NN"},{"id":"T14041","span":{"begin":148,"end":153},"obj":"NN"},{"id":"T14040","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T14039","span":{"begin":134,"end":144},"obj":"NN"},{"id":"T14038","span":{"begin":132,"end":133},"obj":"-COMMA-"},{"id":"T14037","span":{"begin":128,"end":132},"obj":"RB"},{"id":"T14036","span":{"begin":120,"end":127},"obj":"VB"},{"id":"T14035","span":{"begin":114,"end":119},"obj":"NN"},{"id":"T14034","span":{"begin":103,"end":113},"obj":"JJ"},{"id":"T14033","span":{"begin":101,"end":102},"obj":"NN"},{"id":"T14032","span":{"begin":93,"end":100},"obj":"NN"},{"id":"T14031","span":{"begin":87,"end":92},"obj":"NN"},{"id":"T14030","span":{"begin":83,"end":86},"obj":"DT"},{"id":"T14029","span":{"begin":80,"end":82},"obj":"IN"},{"id":"T14028","span":{"begin":77,"end":79},"obj":"IN"},{"id":"T14027","span":{"begin":75,"end":76},"obj":"-COMMA-"},{"id":"T14026","span":{"begin":72,"end":75},"obj":"NN"},{"id":"T14025","span":{"begin":68,"end":71},"obj":"DT"},{"id":"T14024","span":{"begin":65,"end":67},"obj":"IN"},{"id":"T14023","span":{"begin":57,"end":64},"obj":"JJ"},{"id":"T14022","span":{"begin":53,"end":56},"obj":"VB"},{"id":"T14021","span":{"begin":47,"end":52},"obj":"NN"},{"id":"T14020","span":{"begin":39,"end":46},"obj":"NN"},{"id":"T14019","span":{"begin":33,"end":38},"obj":"NN"},{"id":"T14018","span":{"begin":22,"end":32},"obj":"JJ"},{"id":"T14017","span":{"begin":16,"end":21},"obj":"CD"},{"id":"T14016","span":{"begin":11,"end":15},"obj":"WRB"},{"id":"T14015","span":{"begin":6,"end":10},"obj":"RB"},{"id":"T14014","span":{"begin":4,"end":5},"obj":"-COMMA-"},{"id":"T14013","span":{"begin":0,"end":4},"obj":"RB"}],"relations":[{"id":"R10421","pred":"arg1Of","subj":"T14015","obj":"T14016"},{"id":"R10422","pred":"arg1Of","subj":"T14021","obj":"T14017"},{"id":"R10423","pred":"arg1Of","subj":"T14021","obj":"T14018"},{"id":"R10424","pred":"arg1Of","subj":"T14021","obj":"T14019"},{"id":"R10425","pred":"arg1Of","subj":"T14021","obj":"T14020"},{"id":"R10426","pred":"arg1Of","subj":"T14021","obj":"T14022"},{"id":"R10427","pred":"arg1Of","subj":"T14021","obj":"T14023"},{"id":"R10428","pred":"arg2Of","subj":"T14022","obj":"T14015"},{"id":"R10429","pred":"arg2Of","subj":"T14023","obj":"T14022"},{"id":"R10430","pred":"arg1Of","subj":"T14023","obj":"T14024"},{"id":"R10431","pred":"arg2Of","subj":"T14026","obj":"T14024"},{"id":"R10432","pred":"arg1Of","subj":"T14026","obj":"T14025"},{"id":"R10433","pred":"arg1Of","subj":"T14029","obj":"T14028"},{"id":"R10434","pred":"arg2Of","subj":"T14035","obj":"T14029"},{"id":"R10435","pred":"arg1Of","subj":"T14035","obj":"T14030"},{"id":"R10436","pred":"arg1Of","subj":"T14035","obj":"T14031"},{"id":"R10437","pred":"arg1Of","subj":"T14035","obj":"T14032"},{"id":"R10438","pred":"arg1Of","subj":"T14035","obj":"T14033"},{"id":"R10439","pred":"arg1Of","subj":"T14035","obj":"T14034"},{"id":"R10440","pred":"arg2Of","subj":"T14035","obj":"T14036"},{"id":"R10441","pred":"arg1Of","subj":"T14036","obj":"T14037"},{"id":"R10442","pred":"arg1Of","subj":"T14039","obj":"T14040"},{"id":"R10443","pred":"arg1Of","subj":"T14039","obj":"T14046"},{"id":"R10444","pred":"arg2Of","subj":"T14042","obj":"T14040"},{"id":"R10445","pred":"arg1Of","subj":"T14042","obj":"T14041"},{"id":"R10446","pred":"arg1Of","subj":"T14042","obj":"T14043"},{"id":"R10447","pred":"arg2Of","subj":"T14045","obj":"T14043"},{"id":"R10448","pred":"arg1Of","subj":"T14045","obj":"T14044"},{"id":"R10449","pred":"arg1Of","subj":"T14046","obj":"T14013"},{"id":"R10450","pred":"arg1Of","subj":"T14046","obj":"T14014"},{"id":"R10451","pred":"arg1Of","subj":"T14046","obj":"T14015"},{"id":"R10452","pred":"arg1Of","subj":"T14046","obj":"T14027"},{"id":"R10453","pred":"arg1Of","subj":"T14046","obj":"T14029"},{"id":"R10454","pred":"arg1Of","subj":"T14046","obj":"T14038"},{"id":"R10455","pred":"arg1Of","subj":"T14046","obj":"T14049"},{"id":"R10456","pred":"arg2Of","subj":"T14048","obj":"T14046"},{"id":"R10457","pred":"arg1Of","subj":"T14048","obj":"T14047"},{"id":"R10458","pred":"arg1Of","subj":"T14049","obj":"T14051"},{"id":"R10459","pred":"arg2Of","subj":"T14050","obj":"T14049"},{"id":"R10460","pred":"arg3Of","subj":"T14053","obj":"T14049"},{"id":"R10461","pred":"arg1Of","subj":"T14053","obj":"T14052"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T13722","span":{"begin":148,"end":153},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T14061","span":{"begin":148,"end":153},"obj":"http://www.uniprot.org/uniprot/O94916"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T13730","span":{"begin":33,"end":46},"obj":"http://purl.obolibrary.org/obo/GO_0051059"},{"id":"T13729","span":{"begin":154,"end":161},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T13728","span":{"begin":39,"end":46},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    sentences

    {"project":"sentences","denotations":[{"id":"T13714","span":{"begin":0,"end":231},"obj":"Sentence"},{"id":"T227","span":{"begin":0,"end":231},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    simple1

    {"project":"simple1","denotations":[{"id":"T13736","span":{"begin":148,"end":153},"obj":"Protein"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T14444","span":{"begin":134,"end":144},"obj":"Negative_regulation"},{"id":"T14443","span":{"begin":154,"end":161},"obj":"Binding"},{"id":"T14442","span":{"begin":148,"end":153},"obj":"Protein"}],"relations":[{"id":"R10801","pred":"themeOf","subj":"T14442","obj":"T14443"},{"id":"R10802","pred":"themeOf","subj":"T14443","obj":"T14444"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T14074","span":{"begin":154,"end":161},"obj":"Binding"},{"id":"T14073","span":{"begin":134,"end":144},"obj":"Negative_regulation"},{"id":"T14072","span":{"begin":148,"end":153},"obj":"Protein"}],"relations":[{"id":"R10464","pred":"themeOf","subj":"T14072","obj":"T14074"},{"id":"R10465","pred":"themeOf","subj":"T14074","obj":"T14073"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T14066","span":{"begin":134,"end":144},"obj":"Negative_regulation"},{"id":"T14065","span":{"begin":154,"end":161},"obj":"Binding"},{"id":"T14064","span":{"begin":148,"end":153},"obj":"Protein"}],"relations":[{"id":"R10462","pred":"themeOf","subj":"T14064","obj":"T14065"},{"id":"R10463","pred":"themeOf","subj":"T14065","obj":"T14066"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T14482","span":{"begin":214,"end":230},"obj":"Regulation"},{"id":"T14480","span":{"begin":134,"end":172},"obj":"Negative_regulation"},{"id":"T14478","span":{"begin":145,"end":172},"obj":"Binding"},{"id":"T14458","span":{"begin":214,"end":217},"obj":"Protein"},{"id":"T14455","span":{"begin":22,"end":52},"obj":"Entity"},{"id":"T14453","span":{"begin":148,"end":153},"obj":"Protein"}],"relations":[{"id":"R10804","pred":"themeOf","subj":"T14453","obj":"T14478"},{"id":"R10805","pred":"themeOf","subj":"T14458","obj":"T14482"},{"id":"R10811","pred":"themeOf","subj":"T14478","obj":"T14480"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T14434","span":{"begin":199,"end":201},"obj":"IN"},{"id":"T14433","span":{"begin":187,"end":198},"obj":"NN"},{"id":"T14432","span":{"begin":181,"end":186},"obj":"NN"},{"id":"T14431","span":{"begin":173,"end":180},"obj":"VBZ"},{"id":"T14430","span":{"begin":169,"end":172},"obj":"NNP"},{"id":"T14429","span":{"begin":165,"end":168},"obj":"DT"},{"id":"T14428","span":{"begin":162,"end":164},"obj":"TO"},{"id":"T14427","span":{"begin":154,"end":161},"obj":"JJ"},{"id":"T14426","span":{"begin":148,"end":153},"obj":"CD"},{"id":"T14425","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T14424","span":{"begin":134,"end":144},"obj":"NN"},{"id":"T14423","span":{"begin":132,"end":133},"obj":","},{"id":"T14422","span":{"begin":128,"end":132},"obj":"RB"},{"id":"T14421","span":{"begin":120,"end":127},"obj":"VBN"},{"id":"T14420","span":{"begin":114,"end":119},"obj":"NN"},{"id":"T14419","span":{"begin":103,"end":113},"obj":"JJ"},{"id":"T14418","span":{"begin":101,"end":102},"obj":"NNP"},{"id":"T14417","span":{"begin":93,"end":100},"obj":"NN"},{"id":"T14416","span":{"begin":87,"end":92},"obj":"NNP"},{"id":"T14415","span":{"begin":83,"end":86},"obj":"DT"},{"id":"T14414","span":{"begin":80,"end":82},"obj":"IN"},{"id":"T14413","span":{"begin":77,"end":79},"obj":"IN"},{"id":"T14412","span":{"begin":75,"end":76},"obj":","},{"id":"T14411","span":{"begin":72,"end":75},"obj":"NNP"},{"id":"T14410","span":{"begin":68,"end":71},"obj":"DT"},{"id":"T14409","span":{"begin":65,"end":67},"obj":"IN"},{"id":"T14408","span":{"begin":57,"end":64},"obj":"JJ"},{"id":"T14407","span":{"begin":53,"end":56},"obj":"VBP"},{"id":"T14406","span":{"begin":47,"end":52},"obj":"NNS"},{"id":"T14405","span":{"begin":39,"end":46},"obj":"JJ"},{"id":"T14404","span":{"begin":33,"end":38},"obj":"NN"},{"id":"T14403","span":{"begin":22,"end":32},"obj":"JJ"},{"id":"T14402","span":{"begin":16,"end":21},"obj":"CD"},{"id":"T14401","span":{"begin":11,"end":15},"obj":"WRB"},{"id":"T14400","span":{"begin":6,"end":10},"obj":"RB"},{"id":"T14399","span":{"begin":4,"end":5},"obj":","},{"id":"T14398","span":{"begin":0,"end":4},"obj":"RB"},{"id":"T14439","span":{"begin":230,"end":231},"obj":"."},{"id":"T14438","span":{"begin":218,"end":230},"obj":"NN"},{"id":"T14437","span":{"begin":214,"end":217},"obj":"NNP"},{"id":"T14436","span":{"begin":211,"end":213},"obj":"TO"},{"id":"T14435","span":{"begin":202,"end":210},"obj":"NN"}],"relations":[{"id":"R10759","pred":"advmod","subj":"T14398","obj":"T14431"},{"id":"R10760","pred":"punct","subj":"T14399","obj":"T14431"},{"id":"R10761","pred":"advmod","subj":"T14400","obj":"T14401"},{"id":"R10762","pred":"advmod","subj":"T14401","obj":"T14407"},{"id":"R10763","pred":"nummod","subj":"T14402","obj":"T14406"},{"id":"R10764","pred":"amod","subj":"T14403","obj":"T14406"},{"id":"R10765","pred":"npadvmod","subj":"T14404","obj":"T14405"},{"id":"R10766","pred":"amod","subj":"T14405","obj":"T14406"},{"id":"R10767","pred":"nsubj","subj":"T14406","obj":"T14407"},{"id":"R10768","pred":"advcl","subj":"T14407","obj":"T14431"},{"id":"R10769","pred":"acomp","subj":"T14408","obj":"T14407"},{"id":"R10770","pred":"prep","subj":"T14409","obj":"T14408"},{"id":"R10771","pred":"det","subj":"T14410","obj":"T14411"},{"id":"R10772","pred":"pobj","subj":"T14411","obj":"T14409"},{"id":"R10773","pred":"punct","subj":"T14412","obj":"T14407"},{"id":"R10774","pred":"prep","subj":"T14413","obj":"T14407"},{"id":"R10775","pred":"prep","subj":"T14414","obj":"T14413"},{"id":"R10776","pred":"det","subj":"T14415","obj":"T14420"},{"id":"R10777","pred":"nmod","subj":"T14416","obj":"T14418"},{"id":"R10778","pred":"compound","subj":"T14417","obj":"T14418"},{"id":"R10779","pred":"nmod","subj":"T14418","obj":"T14420"},{"id":"R10780","pred":"amod","subj":"T14419","obj":"T14420"},{"id":"R10781","pred":"pobj","subj":"T14420","obj":"T14414"},{"id":"R10782","pred":"acl","subj":"T14421","obj":"T14420"},{"id":"R10783","pred":"advmod","subj":"T14422","obj":"T14421"},{"id":"R10784","pred":"punct","subj":"T14423","obj":"T14420"},{"id":"R10785","pred":"pobj","subj":"T14424","obj":"T14413"},{"id":"R10786","pred":"prep","subj":"T14425","obj":"T14424"},{"id":"R10787","pred":"pobj","subj":"T14426","obj":"T14425"},{"id":"R10788","pred":"amod","subj":"T14427","obj":"T14413"},{"id":"R10789","pred":"prep","subj":"T14428","obj":"T14427"},{"id":"R10790","pred":"det","subj":"T14429","obj":"T14431"},{"id":"R10791","pred":"nsubj","subj":"T14430","obj":"T14431"},{"id":"R10792","pred":"ROOT","subj":"T14431","obj":"T14431"},{"id":"R10793","pred":"compound","subj":"T14432","obj":"T14433"},{"id":"R10794","pred":"dobj","subj":"T14433","obj":"T14431"},{"id":"R10795","pred":"prep","subj":"T14434","obj":"T14431"},{"id":"R10796","pred":"pobj","subj":"T14435","obj":"T14434"},{"id":"R10797","pred":"prep","subj":"T14436","obj":"T14435"},{"id":"R10798","pred":"compound","subj":"T14437","obj":"T14438"},{"id":"R10799","pred":"pobj","subj":"T14438","obj":"T14436"}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even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T14093","span":{"begin":154,"end":161},"obj":"Binding"},{"id":"T14092","span":{"begin":148,"end":153},"obj":"Protein"},{"id":"T14091","span":{"begin":33,"end":38},"obj":"Protein"}],"relations":[{"id":"R10469","pred":"themeOf","subj":"T14092","obj":"T14093"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    testone

    {"project":"testone","denotations":[{"id":"T13699","span":{"begin":134,"end":144},"obj":"Negative_regulation"},{"id":"T13696","span":{"begin":148,"end":153},"obj":"Protein"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}

    test3

    {"project":"test3","denotations":[{"id":"T13705","span":{"begin":148,"end":153},"obj":"Protein"},{"id":"T13702","span":{"begin":148,"end":153},"obj":"Protein"}],"text":"Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection."}