> top > docs > PMC:3320587 > spans > 39509-39740 > annotations

PMC:3320587 / 39509-39740 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14053 218-230 NN denotes co-infection
T14052 214-217 NN denotes MTb
T14051 211-213 TO denotes to
T14050 202-210 NN denotes response
T14049 199-201 IN denotes in
T14048 187-198 NN denotes replication
T14047 181-186 NN denotes virus
T14046 173-180 VB denotes impairs
T14045 169-172 NN denotes LTR
T14044 165-168 DT denotes the
T14043 162-164 TO denotes to
T14042 154-161 NN denotes binding
T14041 148-153 NN denotes NFAT5
T14040 145-147 IN denotes of
T14039 134-144 NN denotes disruption
T14038 132-133 -COMMA- denotes ,
T14037 128-132 RB denotes here
T14036 120-127 VB denotes studied
T14035 114-119 NN denotes clone
T14034 103-113 JJ denotes infectious
T14033 101-102 NN denotes C
T14032 93-100 NN denotes subtype
T14031 87-92 NN denotes HIV-1
T14030 83-86 DT denotes the
T14029 80-82 IN denotes in
T14028 77-79 IN denotes as
T14027 75-76 -COMMA- denotes ,
T14026 72-75 NN denotes LTR
T14025 68-71 DT denotes the
T14024 65-67 IN denotes in
T14023 57-64 JJ denotes present
T14022 53-56 VB denotes are
T14021 47-52 NN denotes sites
T14020 39-46 NN denotes binding
T14019 33-38 NN denotes NF-κB
T14018 22-32 JJ denotes functional
T14017 16-21 CD denotes three
T14016 11-15 WRB denotes when
T14015 6-10 RB denotes even
T14014 4-5 -COMMA- denotes ,
T14013 0-4 RB denotes Thus
R10421 T14015 T14016 arg1Of even,when
R10422 T14021 T14017 arg1Of sites,three
R10423 T14021 T14018 arg1Of sites,functional
R10424 T14021 T14019 arg1Of sites,NF-κB
R10425 T14021 T14020 arg1Of sites,binding
R10426 T14021 T14022 arg1Of sites,are
R10427 T14021 T14023 arg1Of sites,present
R10428 T14022 T14015 arg2Of are,even
R10429 T14023 T14022 arg2Of present,are
R10430 T14023 T14024 arg1Of present,in
R10431 T14026 T14024 arg2Of LTR,in
R10432 T14026 T14025 arg1Of LTR,the
R10433 T14029 T14028 arg1Of in,as
R10434 T14035 T14029 arg2Of clone,in
R10435 T14035 T14030 arg1Of clone,the
R10436 T14035 T14031 arg1Of clone,HIV-1
R10437 T14035 T14032 arg1Of clone,subtype
R10438 T14035 T14033 arg1Of clone,C
R10439 T14035 T14034 arg1Of clone,infectious
R10440 T14035 T14036 arg2Of clone,studied
R10441 T14036 T14037 arg1Of studied,here
R10442 T14039 T14040 arg1Of disruption,of
R10443 T14039 T14046 arg1Of disruption,impairs
R10444 T14042 T14040 arg2Of binding,of
R10445 T14042 T14041 arg1Of binding,NFAT5
R10446 T14042 T14043 arg1Of binding,to
R10447 T14045 T14043 arg2Of LTR,to
R10448 T14045 T14044 arg1Of LTR,the
R10449 T14046 T14013 arg1Of impairs,Thus
R10450 T14046 T14014 arg1Of impairs,","
R10451 T14046 T14015 arg1Of impairs,even
R10452 T14046 T14027 arg1Of impairs,","
R10453 T14046 T14029 arg1Of impairs,in
R10454 T14046 T14038 arg1Of impairs,","
R10455 T14046 T14049 arg1Of impairs,in
R10456 T14048 T14046 arg2Of replication,impairs
R10457 T14048 T14047 arg1Of replication,virus
R10458 T14049 T14051 arg1Of in,to
R10459 T14050 T14049 arg2Of response,in
R10460 T14053 T14049 arg3Of co-infection,in
R10461 T14053 T14052 arg1Of co-infection,MTb

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T13722 148-153 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14061 148-153 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-MF

Id Subject Object Predicate Lexical cue
T13730 33-46 http://purl.obolibrary.org/obo/GO_0051059 denotes NF-κB binding
T13729 154-161 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T13728 39-46 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T13714 0-231 Sentence denotes Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection.
T227 0-231 Sentence denotes Thus, even when three functional NF-κB binding sites are present in the LTR, as in the HIV-1 subtype C infectious clone studied here, disruption of NFAT5 binding to the LTR impairs virus replication in response to MTb co-infection.

simple1

Id Subject Object Predicate Lexical cue
T13736 148-153 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14444 134-144 Negative_regulation denotes disruption
T14443 154-161 Binding denotes binding
T14442 148-153 Protein denotes NFAT5
R10801 T14442 T14443 themeOf NFAT5,binding
R10802 T14443 T14444 themeOf binding,disruption

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14074 154-161 Binding denotes binding
T14073 134-144 Negative_regulation denotes disruption
T14072 148-153 Protein denotes NFAT5
R10464 T14072 T14074 themeOf NFAT5,binding
R10465 T14074 T14073 themeOf binding,disruption

DLUT931

Id Subject Object Predicate Lexical cue
T14066 134-144 Negative_regulation denotes disruption
T14065 154-161 Binding denotes binding
T14064 148-153 Protein denotes NFAT5
R10462 T14064 T14065 themeOf NFAT5,binding
R10463 T14065 T14066 themeOf binding,disruption

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14482 214-230 Regulation denotes MTb co-infection
T14480 134-172 Negative_regulation denotes disruption of NFAT5 binding to the LTR
T14478 145-172 Binding denotes of NFAT5 binding to the LTR
T14458 214-217 Protein denotes MTb
T14455 22-52 Entity denotes functional NF-κB binding sites
T14453 148-153 Protein denotes NFAT5
R10804 T14453 T14478 themeOf NFAT5,of NFAT5 binding to the LTR
R10805 T14458 T14482 themeOf MTb,MTb co-infection
R10811 T14478 T14480 themeOf of NFAT5 binding to the LTR,disruption of NFAT5 binding to the LTR

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14434 199-201 IN denotes in
T14433 187-198 NN denotes replication
T14432 181-186 NN denotes virus
T14431 173-180 VBZ denotes impairs
T14430 169-172 NNP denotes LTR
T14429 165-168 DT denotes the
T14428 162-164 TO denotes to
T14427 154-161 JJ denotes binding
T14426 148-153 CD denotes NFAT5
T14425 145-147 IN denotes of
T14424 134-144 NN denotes disruption
T14423 132-133 , denotes ,
T14422 128-132 RB denotes here
T14421 120-127 VBN denotes studied
T14420 114-119 NN denotes clone
T14419 103-113 JJ denotes infectious
T14418 101-102 NNP denotes C
T14417 93-100 NN denotes subtype
T14416 87-92 NNP denotes HIV-1
T14415 83-86 DT denotes the
T14414 80-82 IN denotes in
T14413 77-79 IN denotes as
T14412 75-76 , denotes ,
T14411 72-75 NNP denotes LTR
T14410 68-71 DT denotes the
T14409 65-67 IN denotes in
T14408 57-64 JJ denotes present
T14407 53-56 VBP denotes are
T14406 47-52 NNS denotes sites
T14405 39-46 JJ denotes binding
T14404 33-38 NN denotes NF-κB
T14403 22-32 JJ denotes functional
T14402 16-21 CD denotes three
T14401 11-15 WRB denotes when
T14400 6-10 RB denotes even
T14399 4-5 , denotes ,
T14398 0-4 RB denotes Thus
T14439 230-231 . denotes .
T14438 218-230 NN denotes co-infection
T14437 214-217 NNP denotes MTb
T14436 211-213 TO denotes to
T14435 202-210 NN denotes response
R10759 T14398 T14431 advmod Thus,impairs
R10760 T14399 T14431 punct ",",impairs
R10761 T14400 T14401 advmod even,when
R10762 T14401 T14407 advmod when,are
R10763 T14402 T14406 nummod three,sites
R10764 T14403 T14406 amod functional,sites
R10765 T14404 T14405 npadvmod NF-κB,binding
R10766 T14405 T14406 amod binding,sites
R10767 T14406 T14407 nsubj sites,are
R10768 T14407 T14431 advcl are,impairs
R10769 T14408 T14407 acomp present,are
R10770 T14409 T14408 prep in,present
R10771 T14410 T14411 det the,LTR
R10772 T14411 T14409 pobj LTR,in
R10773 T14412 T14407 punct ",",are
R10774 T14413 T14407 prep as,are
R10775 T14414 T14413 prep in,as
R10776 T14415 T14420 det the,clone
R10777 T14416 T14418 nmod HIV-1,C
R10778 T14417 T14418 compound subtype,C
R10779 T14418 T14420 nmod C,clone
R10780 T14419 T14420 amod infectious,clone
R10781 T14420 T14414 pobj clone,in
R10782 T14421 T14420 acl studied,clone
R10783 T14422 T14421 advmod here,studied
R10784 T14423 T14420 punct ",",clone
R10785 T14424 T14413 pobj disruption,as
R10786 T14425 T14424 prep of,disruption
R10787 T14426 T14425 pobj NFAT5,of
R10788 T14427 T14413 amod binding,as
R10789 T14428 T14427 prep to,binding
R10790 T14429 T14431 det the,impairs
R10791 T14430 T14431 nsubj LTR,impairs
R10792 T14431 T14431 ROOT impairs,impairs
R10793 T14432 T14433 compound virus,replication
R10794 T14433 T14431 dobj replication,impairs
R10795 T14434 T14431 prep in,impairs
R10796 T14435 T14434 pobj response,in
R10797 T14436 T14435 prep to,response
R10798 T14437 T14438 compound MTb,co-infection
R10799 T14438 T14436 pobj co-infection,to
R10800 T14439 T14431 punct .,impairs

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T14093 154-161 Binding denotes binding
T14092 148-153 Protein denotes NFAT5
T14091 33-38 Protein denotes NF-κB
R10469 T14092 T14093 themeOf NFAT5,binding

testone

Id Subject Object Predicate Lexical cue
T13699 134-144 Negative_regulation denotes disruption
T13696 148-153 Protein denotes NFAT5

test3

Id Subject Object Predicate Lexical cue
T13705 148-153 Protein denotes NFAT5
T13702 148-153 Protein denotes NFAT5