PMC:3320587 / 3761-4076 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"22496647-10588727-98010775","span":{"begin":97,"end":99},"obj":"10588727"},{"id":"22496647-9430229-98010776","span":{"begin":102,"end":104},"obj":"9430229"},{"id":"22496647-21852682-98010777","span":{"begin":120,"end":122},"obj":"21852682"},{"id":"22496647-14751757-98010778","span":{"begin":126,"end":128},"obj":"14751757"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    pmc-enju-pas

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recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T987","span":{"begin":132,"end":137},"obj":"Protein"},{"id":"T986","span":{"begin":89,"end":94},"obj":"Protein"},{"id":"T985","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T984","span":{"begin":47,"end":52},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1781","span":{"begin":148,"end":158},"obj":"http://www.uniprot.org/uniprot/Q60680-2"},{"id":"T1780","span":{"begin":148,"end":158},"obj":"http://www.uniprot.org/uniprot/O15111"},{"id":"T1779","span":{"begin":132,"end":137},"obj":"http://www.uniprot.org/uniprot/Q9Y4K3"},{"id":"T1778","span":{"begin":89,"end":94},"obj":"http://www.uniprot.org/uniprot/Q9Y4K3"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1008","span":{"begin":265,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T1023","span":{"begin":242,"end":278},"obj":"http://purl.obolibrary.org/obo/GO_0045893"},{"id":"T1022","span":{"begin":160,"end":163},"obj":"http://purl.obolibrary.org/obo/GO_0008384"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T1039","span":{"begin":160,"end":163},"obj":"http://purl.obolibrary.org/obo/GO_0008384"},{"id":"T1038","span":{"begin":72,"end":81},"obj":"http://purl.obolibrary.org/obo/GO_0031386"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    simple1

    {"project":"simple1","denotations":[{"id":"T1081","span":{"begin":132,"end":137},"obj":"Protein"},{"id":"T1080","span":{"begin":89,"end":94},"obj":"Protein"},{"id":"T1079","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T1078","span":{"begin":47,"end":52},"obj":"Protein"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T2686","span":{"begin":5,"end":16},"obj":"Binding"},{"id":"T2675","span":{"begin":132,"end":137},"obj":"Protein"},{"id":"T2674","span":{"begin":89,"end":94},"obj":"Protein"},{"id":"T2673","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T2672","span":{"begin":47,"end":52},"obj":"Protein"}],"relations":[{"id":"R2057","pred":"themeOf","subj":"T2672","obj":"T2686"},{"id":"R2064","pred":"themeOf","subj":"T2673","obj":"T2686"},{"id":"R2075","pred":"themeOf","subj":"T2674","obj":"T2686"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T1865","span":{"begin":5,"end":16},"obj":"Binding"},{"id":"T1853","span":{"begin":89,"end":94},"obj":"Protein"},{"id":"T1854","span":{"begin":132,"end":137},"obj":"Protein"},{"id":"T1852","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T1851","span":{"begin":47,"end":52},"obj":"Protein"}],"relations":[{"id":"R1380","pred":"themeOf","subj":"T1851","obj":"T1865"},{"id":"R1381","pred":"themeOf","subj":"T1852","obj":"T1865"},{"id":"R1382","pred":"themeOf","subj":"T1853","obj":"T1865"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T1816","span":{"begin":5,"end":16},"obj":"Binding"},{"id":"T1803","span":{"begin":132,"end":137},"obj":"Protein"},{"id":"T1802","span":{"begin":89,"end":94},"obj":"Protein"},{"id":"T1801","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T1800","span":{"begin":47,"end":52},"obj":"Protein"}],"relations":[{"id":"R1357","pred":"themeOf","subj":"T1800","obj":"T1816"},{"id":"R1358","pred":"themeOf","subj":"T1801","obj":"T1816"},{"id":"R1359","pred":"themeOf","subj":"T1802","obj":"T1816"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T2787","span":{"begin":169,"end":200},"obj":"Positive_regulation"},{"id":"T2782","span":{"begin":132,"end":208},"obj":"Positive_regulation"},{"id":"T2776","span":{"begin":242,"end":285},"obj":"Positive_regulation"},{"id":"T2764","span":{"begin":68,"end":94},"obj":"Protein"},{"id":"T2753","span":{"begin":169,"end":200},"obj":"Protein"},{"id":"T2747","span":{"begin":310,"end":315},"obj":"Protein"},{"id":"T2739","span":{"begin":132,"end":137},"obj":"Protein"},{"id":"T2738","span":{"begin":72,"end":81},"obj":"Protein"},{"id":"T2730","span":{"begin":20,"end":63},"obj":"Protein"},{"id":"T2729","span":{"begin":253,"end":285},"obj":"Protein"},{"id":"T2728","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T2715","span":{"begin":148,"end":164},"obj":"Protein"},{"id":"T2710","span":{"begin":47,"end":52},"obj":"Protein"},{"id":"T2708","span":{"begin":68,"end":94},"obj":"Protein"},{"id":"T2707","span":{"begin":169,"end":186},"obj":"Entity"},{"id":"T2703","span":{"begin":148,"end":208},"obj":"Protein"},{"id":"T2702","span":{"begin":196,"end":199},"obj":"Protein"}],"relations":[{"id":"R2120","pred":"themeOf","subj":"T2703","obj":"T2782"},{"id":"R2134","pred":"causeOf","subj":"T2707","obj":"T2787"},{"id":"R2147","pred":"themeOf","subj":"T2729","obj":"T2776"},{"id":"R2149","pred":"causeOf","subj":"T2739","obj":"T2782"},{"id":"R2151","pred":"themeOf","subj":"T2753","obj":"T2787"}],"text":"uent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6 ([21]–[23], reviewed in [10], [24]). TRAF6 activates IκB kinase (IKK) and mitogen-activated protein (MAP) kinases that, in turn, ultimately induce activation of specific transcription factor families, including the NF-κB"}

    bionlp-st-ge-2016-spacy-parsed

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