PMC:3320587 / 3751-3855 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T1350","span":{"begin":99,"end":104},"obj":"NN"},{"id":"T1349","span":{"begin":92,"end":98},"obj":"NN"},{"id":"T1348","span":{"begin":82,"end":91},"obj":"NN"},{"id":"T1347","span":{"begin":78,"end":81},"obj":"DT"},{"id":"T1346","span":{"begin":74,"end":77},"obj":"CC"},{"id":"T1345","span":{"begin":72,"end":73},"obj":"-COMMA-"},{"id":"T1344","span":{"begin":67,"end":72},"obj":"NN"},{"id":"T1343","span":{"begin":63,"end":66},"obj":"CC"},{"id":"T1342","span":{"begin":57,"end":62},"obj":"NN"},{"id":"T1341","span":{"begin":47,"end":56},"obj":"VB"},{"id":"T1340","span":{"begin":45,"end":46},"obj":"-COMMA-"},{"id":"T1339","span":{"begin":38,"end":45},"obj":"NN"},{"id":"T1338","span":{"begin":30,"end":37},"obj":"JJ"},{"id":"T1337","span":{"begin":27,"end":29},"obj":"IN"},{"id":"T1336","span":{"begin":15,"end":26},"obj":"NN"},{"id":"T1335","span":{"begin":4,"end":14},"obj":"JJ"},{"id":"T1334","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R900","pred":"arg1Of","subj":"T1336","obj":"T1334"},{"id":"R901","pred":"arg1Of","subj":"T1336","obj":"T1335"},{"id":"R902","pred":"arg1Of","subj":"T1336","obj":"T1337"},{"id":"R903","pred":"arg2Of","subj":"T1339","obj":"T1337"},{"id":"R904","pred":"arg1Of","subj":"T1339","obj":"T1338"},{"id":"R905","pred":"arg1Of","subj":"T1339","obj":"T1340"},{"id":"R906","pred":"arg1Of","subj":"T1339","obj":"T1341"},{"id":"R907","pred":"arg1Of","subj":"T1342","obj":"T1343"},{"id":"R908","pred":"arg1Of","subj":"T1343","obj":"T1346"},{"id":"R909","pred":"arg2Of","subj":"T1344","obj":"T1343"},{"id":"R910","pred":"arg2Of","subj":"T1346","obj":"T1341"},{"id":"R911","pred":"arg1Of","subj":"T1346","obj":"T1345"},{"id":"R912","pred":"arg2Of","subj":"T1350","obj":"T1346"},{"id":"R913","pred":"arg1Of","subj":"T1350","obj":"T1347"},{"id":"R914","pred":"arg1Of","subj":"T1350","obj":"T1348"},{"id":"R915","pred":"arg1Of","subj":"T1350","obj":"T1349"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T986","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T985","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T984","span":{"begin":57,"end":62},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1778","span":{"begin":99,"end":104},"obj":"http://www.uniprot.org/uniprot/Q9Y4K3"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T1038","span":{"begin":82,"end":91},"obj":"http://purl.obolibrary.org/obo/GO_0031386"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    simple1

    {"project":"simple1","denotations":[{"id":"T1080","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T1079","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T1078","span":{"begin":57,"end":62},"obj":"Protein"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T2686","span":{"begin":15,"end":26},"obj":"Binding"},{"id":"T2674","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T2673","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T2672","span":{"begin":57,"end":62},"obj":"Protein"}],"relations":[{"id":"R2057","pred":"themeOf","subj":"T2672","obj":"T2686"},{"id":"R2064","pred":"themeOf","subj":"T2673","obj":"T2686"},{"id":"R2075","pred":"themeOf","subj":"T2674","obj":"T2686"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T1865","span":{"begin":15,"end":26},"obj":"Binding"},{"id":"T1853","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T1852","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T1851","span":{"begin":57,"end":62},"obj":"Protein"}],"relations":[{"id":"R1380","pred":"themeOf","subj":"T1851","obj":"T1865"},{"id":"R1381","pred":"themeOf","subj":"T1852","obj":"T1865"},{"id":"R1382","pred":"themeOf","subj":"T1853","obj":"T1865"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T1816","span":{"begin":15,"end":26},"obj":"Binding"},{"id":"T1802","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T1801","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T1800","span":{"begin":57,"end":62},"obj":"Protein"}],"relations":[{"id":"R1357","pred":"themeOf","subj":"T1800","obj":"T1816"},{"id":"R1358","pred":"themeOf","subj":"T1801","obj":"T1816"},{"id":"R1359","pred":"themeOf","subj":"T1802","obj":"T1816"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T2784","span":{"begin":0,"end":104},"obj":"Binding"},{"id":"T2764","span":{"begin":78,"end":104},"obj":"Protein"},{"id":"T2738","span":{"begin":82,"end":91},"obj":"Protein"},{"id":"T2730","span":{"begin":30,"end":73},"obj":"Protein"},{"id":"T2728","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T2710","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T2708","span":{"begin":78,"end":104},"obj":"Protein"}],"relations":[{"id":"R2148","pred":"themeOf","subj":"T2730","obj":"T2784"},{"id":"R2155","pred":"themeOf","subj":"T2764","obj":"T2784"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2187","span":{"begin":99,"end":104},"obj":"NNP"},{"id":"T2186","span":{"begin":92,"end":98},"obj":"NN"},{"id":"T2185","span":{"begin":82,"end":91},"obj":"NN"},{"id":"T2184","span":{"begin":78,"end":81},"obj":"DT"},{"id":"T2183","span":{"begin":74,"end":77},"obj":"CC"},{"id":"T2182","span":{"begin":72,"end":73},"obj":","},{"id":"T2181","span":{"begin":67,"end":72},"obj":"NNP"},{"id":"T2180","span":{"begin":63,"end":66},"obj":"CC"},{"id":"T2179","span":{"begin":57,"end":62},"obj":"NNP"},{"id":"T2178","span":{"begin":47,"end":56},"obj":"VBG"},{"id":"T2177","span":{"begin":45,"end":46},"obj":","},{"id":"T2176","span":{"begin":38,"end":45},"obj":"NNS"},{"id":"T2175","span":{"begin":30,"end":37},"obj":"JJ"},{"id":"T2174","span":{"begin":27,"end":29},"obj":"IN"},{"id":"T2173","span":{"begin":15,"end":26},"obj":"NN"},{"id":"T2172","span":{"begin":4,"end":14},"obj":"JJ"},{"id":"T2171","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R1671","pred":"det","subj":"T2171","obj":"T2173"},{"id":"R1672","pred":"amod","subj":"T2172","obj":"T2173"},{"id":"R1674","pred":"prep","subj":"T2174","obj":"T2173"},{"id":"R1676","pred":"amod","subj":"T2175","obj":"T2176"},{"id":"R1677","pred":"pobj","subj":"T2176","obj":"T2174"},{"id":"R1679","pred":"punct","subj":"T2177","obj":"T2176"},{"id":"R1680","pred":"prep","subj":"T2178","obj":"T2176"},{"id":"R1682","pred":"pobj","subj":"T2179","obj":"T2178"},{"id":"R1683","pred":"cc","subj":"T2180","obj":"T2179"},{"id":"R1684","pred":"conj","subj":"T2181","obj":"T2179"},{"id":"R1686","pred":"punct","subj":"T2182","obj":"T2181"},{"id":"R1687","pred":"cc","subj":"T2183","obj":"T2181"},{"id":"R1691","pred":"compound","subj":"T2186","obj":"T2187"},{"id":"R1692","pred":"appos","subj":"T2187","obj":"T2185"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1889","span":{"begin":15,"end":26},"obj":"Binding"},{"id":"T1886","span":{"begin":82,"end":98},"obj":"Protein"},{"id":"T1885","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T1884","span":{"begin":57,"end":62},"obj":"Protein"}],"relations":[{"id":"R1395","pred":"themeOf","subj":"T1886","obj":"T1889"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    testone

    {"project":"testone","denotations":[{"id":"T875","span":{"begin":15,"end":26},"obj":"Binding"},{"id":"T861","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T860","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T859","span":{"begin":57,"end":62},"obj":"Protein"}],"relations":[{"id":"R610","pred":"themeOf","subj":"T859","obj":"T875"},{"id":"R611","pred":"themeOf","subj":"T860","obj":"T875"},{"id":"R612","pred":"themeOf","subj":"T861","obj":"T875"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}

    test3

    {"project":"test3","denotations":[{"id":"T909","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T908","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T907","span":{"begin":57,"end":62},"obj":"Protein"},{"id":"T906","span":{"begin":15,"end":26},"obj":"Binding"},{"id":"T887","span":{"begin":99,"end":104},"obj":"Protein"},{"id":"T886","span":{"begin":67,"end":72},"obj":"Protein"},{"id":"T885","span":{"begin":57,"end":62},"obj":"Protein"}],"relations":[{"id":"R620","pred":"themeOf","subj":"T907","obj":"T906"},{"id":"R621","pred":"themeOf","subj":"T908","obj":"T906"},{"id":"R622","pred":"themeOf","subj":"T909","obj":"T906"}],"text":"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"}