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PMC:3320587 / 3751-3855 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1350 99-104 NN denotes TRAF6
T1349 92-98 NN denotes ligase
T1348 82-91 NN denotes ubiquitin
T1347 78-81 DT denotes the
T1346 74-77 CC denotes and
T1345 72-73 -COMMA- denotes ,
T1344 67-72 NN denotes IRAK4
T1343 63-66 CC denotes and
T1342 57-62 NN denotes IRAK1
T1341 47-56 VB denotes including
T1340 45-46 -COMMA- denotes ,
T1339 38-45 NN denotes kinases
T1338 30-37 JJ denotes several
T1337 27-29 IN denotes of
T1336 15-26 NN denotes recruitment
T1335 4-14 JJ denotes subsequent
T1334 0-3 DT denotes the
R900 T1336 T1334 arg1Of recruitment,the
R901 T1336 T1335 arg1Of recruitment,subsequent
R902 T1336 T1337 arg1Of recruitment,of
R903 T1339 T1337 arg2Of kinases,of
R904 T1339 T1338 arg1Of kinases,several
R905 T1339 T1340 arg1Of kinases,","
R906 T1339 T1341 arg1Of kinases,including
R907 T1342 T1343 arg1Of IRAK1,and
R908 T1343 T1346 arg1Of and,and
R909 T1344 T1343 arg2Of IRAK4,and
R910 T1346 T1341 arg2Of and,including
R911 T1346 T1345 arg1Of and,","
R912 T1350 T1346 arg2Of TRAF6,and
R913 T1350 T1347 arg1Of TRAF6,the
R914 T1350 T1348 arg1Of TRAF6,ubiquitin
R915 T1350 T1349 arg1Of TRAF6,ligase

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T986 99-104 Protein denotes TRAF6
T985 67-72 Protein denotes IRAK4
T984 57-62 Protein denotes IRAK1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1778 99-104 http://www.uniprot.org/uniprot/Q9Y4K3 denotes TRAF6

GO-MF

Id Subject Object Predicate Lexical cue
T1038 82-91 http://purl.obolibrary.org/obo/GO_0031386 denotes ubiquitin

simple1

Id Subject Object Predicate Lexical cue
T1080 99-104 Protein denotes TRAF6
T1079 67-72 Protein denotes IRAK4
T1078 57-62 Protein denotes IRAK1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2686 15-26 Binding denotes recruitment
T2674 99-104 Protein denotes TRAF6
T2673 67-72 Protein denotes IRAK4
T2672 57-62 Protein denotes IRAK1
R2057 T2672 T2686 themeOf IRAK1,recruitment
R2064 T2673 T2686 themeOf IRAK4,recruitment
R2075 T2674 T2686 themeOf TRAF6,recruitment

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1865 15-26 Binding denotes recruitment
T1853 99-104 Protein denotes TRAF6
T1852 67-72 Protein denotes IRAK4
T1851 57-62 Protein denotes IRAK1
R1380 T1851 T1865 themeOf IRAK1,recruitment
R1381 T1852 T1865 themeOf IRAK4,recruitment
R1382 T1853 T1865 themeOf TRAF6,recruitment

DLUT931

Id Subject Object Predicate Lexical cue
T1816 15-26 Binding denotes recruitment
T1802 99-104 Protein denotes TRAF6
T1801 67-72 Protein denotes IRAK4
T1800 57-62 Protein denotes IRAK1
R1357 T1800 T1816 themeOf IRAK1,recruitment
R1358 T1801 T1816 themeOf IRAK4,recruitment
R1359 T1802 T1816 themeOf TRAF6,recruitment

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2784 0-104 Binding denotes the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6
T2764 78-104 Protein denotes the ubiquitin ligase TRAF6
T2738 82-91 Protein denotes ubiquitin
T2730 30-73 Protein denotes several kinases, including IRAK1 and IRAK4,
T2728 67-72 Protein denotes IRAK4
T2710 57-62 Protein denotes IRAK1
T2708 78-104 Protein denotes the ubiquitin ligase TRAF6
R2148 T2730 T2784 themeOf "several kinases, including IRAK1 and IRAK4,","the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"
R2155 T2764 T2784 themeOf the ubiquitin ligase TRAF6,"the subsequent recruitment of several kinases, including IRAK1 and IRAK4, and the ubiquitin ligase TRAF6"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2187 99-104 NNP denotes TRAF6
T2186 92-98 NN denotes ligase
T2185 82-91 NN denotes ubiquitin
T2184 78-81 DT denotes the
T2183 74-77 CC denotes and
T2182 72-73 , denotes ,
T2181 67-72 NNP denotes IRAK4
T2180 63-66 CC denotes and
T2179 57-62 NNP denotes IRAK1
T2178 47-56 VBG denotes including
T2177 45-46 , denotes ,
T2176 38-45 NNS denotes kinases
T2175 30-37 JJ denotes several
T2174 27-29 IN denotes of
T2173 15-26 NN denotes recruitment
T2172 4-14 JJ denotes subsequent
T2171 0-3 DT denotes the
R1671 T2171 T2173 det the,recruitment
R1672 T2172 T2173 amod subsequent,recruitment
R1674 T2174 T2173 prep of,recruitment
R1676 T2175 T2176 amod several,kinases
R1677 T2176 T2174 pobj kinases,of
R1679 T2177 T2176 punct ",",kinases
R1680 T2178 T2176 prep including,kinases
R1682 T2179 T2178 pobj IRAK1,including
R1683 T2180 T2179 cc and,IRAK1
R1684 T2181 T2179 conj IRAK4,IRAK1
R1686 T2182 T2181 punct ",",IRAK4
R1687 T2183 T2181 cc and,IRAK4
R1691 T2186 T2187 compound ligase,TRAF6
R1692 T2187 T2185 appos TRAF6,ubiquitin

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1889 15-26 Binding denotes recruitment
T1886 82-98 Protein denotes ubiquitin ligase
T1885 67-72 Protein denotes IRAK4
T1884 57-62 Protein denotes IRAK1
R1395 T1886 T1889 themeOf ubiquitin ligase,recruitment

testone

Id Subject Object Predicate Lexical cue
T875 15-26 Binding denotes recruitment
T861 99-104 Protein denotes TRAF6
T860 67-72 Protein denotes IRAK4
T859 57-62 Protein denotes IRAK1
R610 T859 T875 themeOf IRAK1,recruitment
R611 T860 T875 themeOf IRAK4,recruitment
R612 T861 T875 themeOf TRAF6,recruitment

test3

Id Subject Object Predicate Lexical cue
T909 99-104 Protein denotes TRAF6
T908 67-72 Protein denotes IRAK4
T907 57-62 Protein denotes IRAK1
T906 15-26 Binding denotes recruitment
T887 99-104 Protein denotes TRAF6
T886 67-72 Protein denotes IRAK4
T885 57-62 Protein denotes IRAK1
R620 T907 T906 themeOf IRAK1,recruitment
R621 T908 T906 themeOf IRAK4,recruitment
R622 T909 T906 themeOf TRAF6,recruitment