PMC:3320587 / 31245-31442 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T11022","span":{"begin":195,"end":196},"obj":"-RRB-"},{"id":"T11021","span":{"begin":193,"end":195},"obj":"NN"},{"id":"T11020","span":{"begin":186,"end":192},"obj":"NN"},{"id":"T11019","span":{"begin":183,"end":185},"obj":"IN"},{"id":"T11018","span":{"begin":177,"end":182},"obj":"CD"},{"id":"T11017","span":{"begin":171,"end":176},"obj":"NN"},{"id":"T11016","span":{"begin":167,"end":170},"obj":"CC"},{"id":"T11015","span":{"begin":162,"end":166},"obj":"CD"},{"id":"T11014","span":{"begin":156,"end":161},"obj":"NN"},{"id":"T11013","span":{"begin":151,"end":155},"obj":"IN"},{"id":"T11012","span":{"begin":147,"end":150},"obj":"CD"},{"id":"T11011","span":{"begin":141,"end":146},"obj":"NN"},{"id":"T11010","span":{"begin":133,"end":140},"obj":"NN"},{"id":"T11009","span":{"begin":132,"end":133},"obj":"-LRB-"},{"id":"T11008","span":{"begin":127,"end":131},"obj":"NN"},{"id":"T11007","span":{"begin":122,"end":126},"obj":"DT"},{"id":"T11006","span":{"begin":119,"end":121},"obj":"IN"},{"id":"T11005","span":{"begin":111,"end":118},"obj":"NN"},{"id":"T11004","span":{"begin":103,"end":110},"obj":"NN"},{"id":"T11003","span":{"begin":93,"end":102},"obj":"VB"},{"id":"T11002","span":{"begin":91,"end":92},"obj":"-COMMA-"},{"id":"T11001","span":{"begin":82,"end":91},"obj":"VB"},{"id":"T11000","span":{"begin":79,"end":81},"obj":"IN"},{"id":"T10999","span":{"begin":77,"end":78},"obj":"-COMMA-"},{"id":"T10998","span":{"begin":72,"end":77},"obj":"NN"},{"id":"T10997","span":{"begin":64,"end":71},"obj":"NN"},{"id":"T10996","span":{"begin":58,"end":63},"obj":"NN"},{"id":"T10995","span":{"begin":51,"end":57},"obj":"CC"},{"id":"T10994","span":{"begin":48,"end":50},"obj":"IN"},{"id":"T10993","span":{"begin":45,"end":47},"obj":"NN"},{"id":"T10992","span":{"begin":42,"end":44},"obj":"TO"},{"id":"T10991","span":{"begin":29,"end":41},"obj":"NN"},{"id":"T10990","span":{"begin":26,"end":28},"obj":"NN"},{"id":"T10989","span":{"begin":22,"end":25},"obj":"DT"},{"id":"T10988","span":{"begin":13,"end":21},"obj":"VB"},{"id":"T10987","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T10986","span":{"begin":3,"end":11},"obj":"NN"},{"id":"T10985","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R8503","pred":"arg2Of","subj":"T10986","obj":"T10985"},{"id":"R8504","pred":"arg2Of","subj":"T10991","obj":"T10988"},{"id":"R8505","pred":"arg1Of","subj":"T10991","obj":"T10989"},{"id":"R8506","pred":"arg1Of","subj":"T10991","obj":"T10990"},{"id":"R8507","pred":"arg1Of","subj":"T10993","obj":"T10988"},{"id":"R8508","pred":"arg1Of","subj":"T10993","obj":"T10992"},{"id":"R8509","pred":"arg1Of","subj":"T10993","obj":"T10994"},{"id":"R8510","pred":"arg2Of","subj":"T10993","obj":"T11001"},{"id":"R8511","pred":"arg1Of","subj":"T10993","obj":"T11003"},{"id":"R8512","pred":"arg2Of","subj":"T10998","obj":"T10994"},{"id":"R8513","pred":"arg1Of","subj":"T10998","obj":"T10995"},{"id":"R8514","pred":"arg1Of","subj":"T10998","obj":"T10996"},{"id":"R8515","pred":"arg1Of","subj":"T10998","obj":"T10997"},{"id":"R8516","pred":"arg2Of","subj":"T11001","obj":"T11000"},{"id":"R8517","pred":"arg1Of","subj":"T11003","obj":"T10985"},{"id":"R8518","pred":"arg1Of","subj":"T11003","obj":"T10987"},{"id":"R8519","pred":"modOf","subj":"T11003","obj":"T10988"},{"id":"R8520","pred":"arg1Of","subj":"T11003","obj":"T10999"},{"id":"R8521","pred":"arg1Of","subj":"T11003","obj":"T11000"},{"id":"R8522","pred":"arg1Of","subj":"T11003","obj":"T11002"},{"id":"R8523","pred":"arg2Of","subj":"T11005","obj":"T11003"},{"id":"R8524","pred":"arg1Of","subj":"T11005","obj":"T11004"},{"id":"R8525","pred":"arg1Of","subj":"T11005","obj":"T11006"},{"id":"R8526","pred":"arg1Of","subj":"T11005","obj":"T11009"},{"id":"R8527","pred":"arg2Of","subj":"T11008","obj":"T11006"},{"id":"R8528","pred":"arg1Of","subj":"T11008","obj":"T11007"},{"id":"R8529","pred":"arg2Of","subj":"T11011","obj":"T11009"},{"id":"R8530","pred":"arg1Of","subj":"T11011","obj":"T11010"},{"id":"R8531","pred":"arg1Of","subj":"T11011","obj":"T11012"},{"id":"R8532","pred":"arg1Of","subj":"T11011","obj":"T11013"},{"id":"R8533","pred":"arg1Of","subj":"T11014","obj":"T11015"},{"id":"R8534","pred":"arg1Of","subj":"T11014","obj":"T11016"},{"id":"R8535","pred":"arg2Of","subj":"T11017","obj":"T11016"},{"id":"R8536","pred":"arg2Of","subj":"T11018","obj":"T11013"},{"id":"R8537","pred":"arg1Of","subj":"T11018","obj":"T11014"},{"id":"R8538","pred":"arg1Of","subj":"T11018","obj":"T11017"},{"id":"R8539","pred":"arg1Of","subj":"T11018","obj":"T11019"},{"id":"R8540","pred":"arg2Of","subj":"T11021","obj":"T11019"},{"id":"R8541","pred":"arg1Of","subj":"T11021","obj":"T11020"},{"id":"R8542","pred":"arg3Of","subj":"T11022","obj":"T11009"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T10539","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T10538","span":{"begin":103,"end":106},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T11136","span":{"begin":107,"end":110},"obj":"http://www.uniprot.org/uniprot/P21579"},{"id":"T11130","span":{"begin":107,"end":110},"obj":"http://www.uniprot.org/uniprot/Q04206"},{"id":"T11124","span":{"begin":103,"end":106},"obj":"http://www.uniprot.org/uniprot/P19838"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T10572","span":{"begin":58,"end":71},"obj":"http://purl.obolibrary.org/obo/GO_0051059"},{"id":"T10563","span":{"begin":111,"end":118},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T10562","span":{"begin":64,"end":71},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    sentences

    {"project":"sentences","denotations":[{"id":"T10455","span":{"begin":0,"end":197},"obj":"Sentence"},{"id":"T185","span":{"begin":0,"end":197},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    simple1

    {"project":"simple1","denotations":[{"id":"T10629","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T10628","span":{"begin":103,"end":106},"obj":"Protein"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T12033","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T12032","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T12011","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T12010","span":{"begin":103,"end":106},"obj":"Protein"}],"relations":[{"id":"R9318","pred":"themeOf","subj":"T12010","obj":"T12032"},{"id":"R9319","pred":"themeOf","subj":"T12011","obj":"T12032"},{"id":"R9333","pred":"themeOf","subj":"T12032","obj":"T12033"},{"id":"R9334","pred":"themeOf","subj":"T12032","obj":"T12033"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T11280","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T11279","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T11258","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T11257","span":{"begin":103,"end":106},"obj":"Protein"}],"relations":[{"id":"R8693","pred":"themeOf","subj":"T11257","obj":"T11279"},{"id":"R8694","pred":"themeOf","subj":"T11258","obj":"T11279"},{"id":"R8708","pred":"themeOf","subj":"T11279","obj":"T11280"},{"id":"R8709","pred":"themeOf","subj":"T11279","obj":"T11280"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T11189","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T11188","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T11163","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T11162","span":{"begin":103,"end":106},"obj":"Protein"}],"relations":[{"id":"R8638","pred":"themeOf","subj":"T11162","obj":"T11188"},{"id":"R8639","pred":"themeOf","subj":"T11162","obj":"T11188"},{"id":"R8640","pred":"themeOf","subj":"T11163","obj":"T11188"},{"id":"R8659","pred":"themeOf","subj":"T11188","obj":"T11189"},{"id":"R8660","pred":"themeOf","subj":"T11188","obj":"T11189"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T12116","span":{"begin":103,"end":118},"obj":"Binding"},{"id":"T12111","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T12106","span":{"begin":45,"end":47},"obj":"Protein"},{"id":"T12094","span":{"begin":103,"end":110},"obj":"Protein"},{"id":"T12078","span":{"begin":22,"end":41},"obj":"Entity"},{"id":"T12066","span":{"begin":103,"end":110},"obj":"Protein"},{"id":"T12056","span":{"begin":122,"end":131},"obj":"Entity"}],"relations":[{"id":"R9353","pred":"themeOf","subj":"T12094","obj":"T12116"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T11903","span":{"begin":196,"end":197},"obj":"."},{"id":"T11902","span":{"begin":195,"end":196},"obj":"-RRB-"},{"id":"T11901","span":{"begin":193,"end":195},"obj":"NN"},{"id":"T11900","span":{"begin":186,"end":192},"obj":"NN"},{"id":"T11899","span":{"begin":183,"end":185},"obj":"IN"},{"id":"T11898","span":{"begin":180,"end":182},"obj":"CD"},{"id":"T11897","span":{"begin":177,"end":179},"obj":"CD"},{"id":"T11896","span":{"begin":171,"end":176},"obj":"NNS"},{"id":"T11895","span":{"begin":167,"end":170},"obj":"CC"},{"id":"T11894","span":{"begin":164,"end":166},"obj":"CD"},{"id":"T11893","span":{"begin":162,"end":163},"obj":"CD"},{"id":"T11892","span":{"begin":156,"end":161},"obj":"NNS"},{"id":"T11891","span":{"begin":151,"end":155},"obj":"IN"},{"id":"T11890","span":{"begin":149,"end":150},"obj":"CD"},{"id":"T11889","span":{"begin":147,"end":148},"obj":"CD"},{"id":"T11888","span":{"begin":141,"end":146},"obj":"NNS"},{"id":"T11887","span":{"begin":133,"end":140},"obj":"VB"},{"id":"T11886","span":{"begin":132,"end":133},"obj":"-LRB-"},{"id":"T11885","span":{"begin":127,"end":131},"obj":"NN"},{"id":"T11884","span":{"begin":122,"end":126},"obj":"DT"},{"id":"T11883","span":{"begin":119,"end":121},"obj":"IN"},{"id":"T11882","span":{"begin":111,"end":118},"obj":"JJ"},{"id":"T11881","span":{"begin":103,"end":110},"obj":"CD"},{"id":"T11880","span":{"begin":93,"end":102},"obj":"VBN"},{"id":"T11879","span":{"begin":91,"end":92},"obj":","},{"id":"T11878","span":{"begin":82,"end":91},"obj":"VBN"},{"id":"T11877","span":{"begin":79,"end":81},"obj":"IN"},{"id":"T11876","span":{"begin":77,"end":78},"obj":","},{"id":"T11875","span":{"begin":72,"end":77},"obj":"NN"},{"id":"T11874","span":{"begin":64,"end":71},"obj":"JJ"},{"id":"T11873","span":{"begin":58,"end":63},"obj":"JJ"},{"id":"T11872","span":{"begin":51,"end":57},"obj":"DT"},{"id":"T11871","span":{"begin":48,"end":50},"obj":"IN"},{"id":"T11870","span":{"begin":45,"end":47},"obj":"NNP"},{"id":"T11869","span":{"begin":42,"end":44},"obj":"TO"},{"id":"T11868","span":{"begin":29,"end":41},"obj":"NN"},{"id":"T11867","span":{"begin":26,"end":28},"obj":"NNP"},{"id":"T11866","span":{"begin":22,"end":25},"obj":"DT"},{"id":"T11865","span":{"begin":13,"end":21},"obj":"VBG"},{"id":"T11864","span":{"begin":11,"end":12},"obj":","},{"id":"T11863","span":{"begin":3,"end":11},"obj":"NN"},{"id":"T11862","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R9177","pred":"prep","subj":"T11862","obj":"T11880"},{"id":"R9178","pred":"pobj","subj":"T11863","obj":"T11862"},{"id":"R9179","pred":"punct","subj":"T11864","obj":"T11880"},{"id":"R9180","pred":"advcl","subj":"T11865","obj":"T11880"},{"id":"R9181","pred":"det","subj":"T11866","obj":"T11868"},{"id":"R9182","pred":"compound","subj":"T11867","obj":"T11868"},{"id":"R9183","pred":"dobj","subj":"T11868","obj":"T11865"},{"id":"R9184","pred":"prep","subj":"T11869","obj":"T11865"},{"id":"R9185","pred":"pobj","subj":"T11870","obj":"T11869"},{"id":"R9186","pred":"prep","subj":"T11871","obj":"T11865"},{"id":"R9187","pred":"det","subj":"T11872","obj":"T11875"},{"id":"R9188","pred":"amod","subj":"T11873","obj":"T11875"},{"id":"R9189","pred":"amod","subj":"T11874","obj":"T11875"},{"id":"R9190","pred":"pobj","subj":"T11875","obj":"T11871"},{"id":"R9191","pred":"punct","subj":"T11876","obj":"T11880"},{"id":"R9192","pred":"mark","subj":"T11877","obj":"T11878"},{"id":"R9193","pred":"advcl","subj":"T11878","obj":"T11880"},{"id":"R9194","pred":"punct","subj":"T11879","obj":"T11880"},{"id":"R9195","pred":"ROOT","subj":"T11880","obj":"T11880"},{"id":"R9196","pred":"nummod","subj":"T11881","obj":"T11882"},{"id":"R9197","pred":"dobj","subj":"T11882","obj":"T11880"},{"id":"R9198","pred":"prep","subj":"T11883","obj":"T11880"},{"id":"R9199","pred":"det","subj":"T11884","obj":"T11885"},{"id":"R9200","pred":"pobj","subj":"T11885","obj":"T11883"},{"id":"R9201","pred":"punct","subj":"T11886","obj":"T11887"},{"id":"R9202","pred":"advcl","subj":"T11887","obj":"T11880"},{"id":"R9203","pred":"dobj","subj":"T11888","obj":"T11887"},{"id":"R9204","pred":"nummod","subj":"T11889","obj":"T11888"},{"id":"R9205","pred":"nummod","subj":"T11890","obj":"T11887"},{"id":"R9206","pred":"prep","subj":"T11891","obj":"T11887"},{"id":"R9207","pred":"pobj","subj":"T11892","obj":"T11891"},{"id":"R9208","pred":"dobj","subj":"T11893","obj":"T11887"},{"id":"R9209","pred":"nummod","subj":"T11894","obj":"T11896"},{"id":"R9210","pred":"cc","subj":"T11895","obj":"T11894"},{"id":"R9211","pred":"appos","subj":"T11896","obj":"T11893"},{"id":"R9212","pred":"appos","subj":"T11897","obj":"T11896"},{"id":"R9213","pred":"appos","subj":"T11898","obj":"T11896"},{"id":"R9214","pred":"prep","subj":"T11899","obj":"T11898"},{"id":"R9215","pred":"compound","subj":"T11900","obj":"T11901"},{"id":"R9216","pred":"pobj","subj":"T11901","obj":"T11899"},{"id":"R9217","pred":"punct","subj":"T11902","obj":"T11896"},{"id":"R9218","pred":"punct","subj":"T11903","obj":"T11887"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T11360","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T11359","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T11358","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T11357","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T11356","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T11355","span":{"begin":103,"end":106},"obj":"Protein"},{"id":"T11354","span":{"begin":58,"end":63},"obj":"Protein"}],"relations":[{"id":"R8739","pred":"themeOf","subj":"T11355","obj":"T11357"},{"id":"R8740","pred":"themeOf","subj":"T11356","obj":"T11358"},{"id":"R8741","pred":"themeOf","subj":"T11357","obj":"T11359"},{"id":"R8742","pred":"themeOf","subj":"T11358","obj":"T11360"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    testone

    {"project":"testone","denotations":[{"id":"T10360","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T10359","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T10358","span":{"begin":62,"end":77},"obj":"Entity"},{"id":"T10357","span":{"begin":58,"end":61},"obj":"Entity"},{"id":"T10335","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T10334","span":{"begin":103,"end":106},"obj":"Protein"}],"relations":[{"id":"R8071","pred":"themeOf","subj":"T10334","obj":"T10360"},{"id":"R8072","pred":"themeOf","subj":"T10335","obj":"T10360"},{"id":"R8084","pred":"themeOf","subj":"T10360","obj":"T10359"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}

    test3

    {"project":"test3","denotations":[{"id":"T10434","span":{"begin":111,"end":118},"obj":"Binding"},{"id":"T10433","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T10432","span":{"begin":103,"end":106},"obj":"Protein"},{"id":"T10431","span":{"begin":93,"end":102},"obj":"Negative_regulation"},{"id":"T10430","span":{"begin":64,"end":71},"obj":"Binding"},{"id":"T10393","span":{"begin":107,"end":110},"obj":"Protein"},{"id":"T10392","span":{"begin":103,"end":106},"obj":"Protein"}],"relations":[{"id":"R8100","pred":"themeOf","subj":"T10432","obj":"T10434"},{"id":"R8101","pred":"themeOf","subj":"T10433","obj":"T10434"},{"id":"R8102","pred":"themeOf","subj":"T10434","obj":"T10431"}],"text":"By contrast, changing the GG dinucleotide to TA in either NF-κB binding motif, as predicted, inhibited p50/p65 binding at each site (compare lanes 2–5 with lanes 7–10 and lanes 12–15 of Figure 3C)."}