PMC:3320587 / 2905-3157 JSONTXT

Annnotations TAB JSON ListView MergeView

    2_test

    {"project":"2_test","denotations":[{"id":"22496647-1906500-98010767","span":{"begin":245,"end":246},"obj":"1906500"},{"id":"22496647-11854362-98010768","span":{"begin":249,"end":250},"obj":"11854362"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T1210","span":{"begin":250,"end":251},"obj":"-RRB-"},{"id":"T1209","span":{"begin":249,"end":250},"obj":"CD"},{"id":"T1208","span":{"begin":248,"end":249},"obj":"-LRB-"},{"id":"T1207","span":{"begin":247,"end":248},"obj":"NN"},{"id":"T1206","span":{"begin":246,"end":247},"obj":"-RRB-"},{"id":"T1205","span":{"begin":245,"end":246},"obj":"CD"},{"id":"T1204","span":{"begin":244,"end":245},"obj":"-LRB-"},{"id":"T1203","span":{"begin":240,"end":243},"obj":"NN"},{"id":"T1202","span":{"begin":234,"end":239},"obj":"NN"},{"id":"T1201","span":{"begin":230,"end":233},"obj":"DT"},{"id":"T1200","span":{"begin":227,"end":229},"obj":"IN"},{"id":"T1199","span":{"begin":216,"end":226},"obj":"NN"},{"id":"T1198","span":{"begin":200,"end":215},"obj":"JJ"},{"id":"T1197","span":{"begin":197,"end":199},"obj":"IN"},{"id":"T1196","span":{"begin":190,"end":196},"obj":"VB"},{"id":"T1195","span":{"begin":185,"end":189},"obj":"RB"},{"id":"T1194","span":{"begin":180,"end":184},"obj":"WDT"},{"id":"T1193","span":{"begin":174,"end":179},"obj":"NN"},{"id":"T1192","span":{"begin":164,"end":173},"obj":"JJ"},{"id":"T1191","span":{"begin":160,"end":163},"obj":"CC"},{"id":"T1190","span":{"begin":154,"end":159},"obj":"NN"},{"id":"T1189","span":{"begin":152,"end":153},"obj":"NN"},{"id":"T1188","span":{"begin":148,"end":151},"obj":"NN"},{"id":"T1187","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T1186","span":{"begin":136,"end":144},"obj":"NN"},{"id":"T1185","span":{"begin":123,"end":135},"obj":"NN"},{"id":"T1184","span":{"begin":116,"end":122},"obj":"NN"},{"id":"T1183","span":{"begin":107,"end":115},"obj":"VB"},{"id":"T1182","span":{"begin":97,"end":106},"obj":"NN"},{"id":"T1181","span":{"begin":93,"end":96},"obj":"NN"},{"id":"T1180","span":{"begin":90,"end":92},"obj":"TO"},{"id":"T1179","span":{"begin":81,"end":89},"obj":"NN"},{"id":"T1178","span":{"begin":78,"end":80},"obj":"IN"},{"id":"T1177","span":{"begin":73,"end":77},"obj":"NN"},{"id":"T1176","span":{"begin":67,"end":72},"obj":"JJ"},{"id":"T1175","span":{"begin":63,"end":66},"obj":"DT"},{"id":"T1174","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T1173","span":{"begin":51,"end":59},"obj":"VB"},{"id":"T1172","span":{"begin":40,"end":50},"obj":"NN"},{"id":"T1171","span":{"begin":36,"end":39},"obj":"CC"},{"id":"T1170","span":{"begin":26,"end":35},"obj":"NN"},{"id":"T1169","span":{"begin":13,"end":25},"obj":"JJ"},{"id":"T1168","span":{"begin":11,"end":12},"obj":"-COMMA-"},{"id":"T1167","span":{"begin":0,"end":11},"obj":"RB"}],"relations":[{"id":"R736","pred":"arg1Of","subj":"T1170","obj":"T1171"},{"id":"R737","pred":"arg1Of","subj":"T1171","obj":"T1169"},{"id":"R738","pred":"arg2Of","subj":"T1171","obj":"T1173"},{"id":"R739","pred":"arg1Of","subj":"T1171","obj":"T1183"},{"id":"R740","pred":"arg2Of","subj":"T1172","obj":"T1171"},{"id":"R741","pred":"arg1Of","subj":"T1173","obj":"T1178"},{"id":"R742","pred":"arg1Of","subj":"T1177","obj":"T1173"},{"id":"R743","pred":"arg2Of","subj":"T1177","obj":"T1174"},{"id":"R744","pred":"arg1Of","subj":"T1177","obj":"T1175"},{"id":"R745","pred":"arg1Of","subj":"T1177","obj":"T1176"},{"id":"R746","pred":"arg1Of","subj":"T1178","obj":"T1180"},{"id":"R747","pred":"arg2Of","subj":"T1179","obj":"T1178"},{"id":"R748","pred":"arg3Of","subj":"T1182","obj":"T1178"},{"id":"R749","pred":"arg1Of","subj":"T1182","obj":"T1181"},{"id":"R750","pred":"arg1Of","subj":"T1183","obj":"T1167"},{"id":"R751","pred":"arg1Of","subj":"T1183","obj":"T1168"},{"id":"R752","pred":"arg2Of","subj":"T1186","obj":"T1183"},{"id":"R753","pred":"arg1Of","subj":"T1186","obj":"T1184"},{"id":"R754","pred":"arg1Of","subj":"T1186","obj":"T1185"},{"id":"R755","pred":"arg1Of","subj":"T1186","obj":"T1187"},{"id":"R756","pred":"arg1Of","subj":"T1186","obj":"T1194"},{"id":"R757","pred":"arg1Of","subj":"T1186","obj":"T1196"},{"id":"R758","pred":"arg1Of","subj":"T1190","obj":"T1188"},{"id":"R759","pred":"arg1Of","subj":"T1190","obj":"T1189"},{"id":"R760","pred":"arg1Of","subj":"T1190","obj":"T1191"},{"id":"R761","pred":"arg2Of","subj":"T1191","obj":"T1187"},{"id":"R762","pred":"arg2Of","subj":"T1193","obj":"T1191"},{"id":"R763","pred":"arg1Of","subj":"T1193","obj":"T1192"},{"id":"R764","pred":"arg1Of","subj":"T1196","obj":"T1195"},{"id":"R765","pred":"arg1Of","subj":"T1196","obj":"T1197"},{"id":"R766","pred":"arg1Of","subj":"T1196","obj":"T1208"},{"id":"R767","pred":"arg2Of","subj":"T1199","obj":"T1197"},{"id":"R768","pred":"arg1Of","subj":"T1199","obj":"T1198"},{"id":"R769","pred":"arg1Of","subj":"T1199","obj":"T1200"},{"id":"R770","pred":"arg2Of","subj":"T1205","obj":"T1204"},{"id":"R771","pred":"arg3Of","subj":"T1206","obj":"T1204"},{"id":"R772","pred":"arg2Of","subj":"T1207","obj":"T1200"},{"id":"R773","pred":"arg1Of","subj":"T1207","obj":"T1201"},{"id":"R774","pred":"arg1Of","subj":"T1207","obj":"T1202"},{"id":"R775","pred":"arg1Of","subj":"T1207","obj":"T1203"},{"id":"R776","pred":"arg1Of","subj":"T1207","obj":"T1204"},{"id":"R777","pred":"arg2Of","subj":"T1209","obj":"T1208"},{"id":"R778","pred":"arg3Of","subj":"T1210","obj":"T1208"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T979","span":{"begin":148,"end":151},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1772","span":{"begin":148,"end":151},"obj":"http://www.uniprot.org/uniprot/P01730"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1012","span":{"begin":107,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_1904515"},{"id":"T1011","span":{"begin":73,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0075136"},{"id":"T1006","span":{"begin":116,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_0007165"},{"id":"T1002","span":{"begin":107,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_1903572"},{"id":"T1000","span":{"begin":107,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_1902533"},{"id":"T1016","span":{"begin":107,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0038007"},{"id":"T1015","span":{"begin":107,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_1902849"},{"id":"T1014","span":{"begin":107,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_0009967"},{"id":"T1013","span":{"begin":107,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_1904263"},{"id":"T1021","span":{"begin":123,"end":135},"obj":"http://purl.obolibrary.org/obo/GO_0009293"},{"id":"T1020","span":{"begin":116,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0035556"},{"id":"T1019","span":{"begin":116,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0036499"},{"id":"T1018","span":{"begin":116,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0036500"},{"id":"T1017","span":{"begin":116,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0036498"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T1049","span":{"begin":174,"end":179},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T1048","span":{"begin":154,"end":159},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T1047","span":{"begin":73,"end":77},"obj":"http://purl.obolibrary.org/obo/GO_0018995"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    sentences

    {"project":"sentences","denotations":[{"id":"T927","span":{"begin":0,"end":252},"obj":"Sentence"},{"id":"T19","span":{"begin":0,"end":252},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    simple1

    {"project":"simple1","denotations":[{"id":"T1073","span":{"begin":148,"end":151},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T2667","span":{"begin":148,"end":151},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T1846","span":{"begin":148,"end":151},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T1795","span":{"begin":148,"end":151},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T2786","span":{"begin":93,"end":106},"obj":"Regulation"},{"id":"T2765","span":{"begin":26,"end":35},"obj":"Protein"},{"id":"T2759","span":{"begin":93,"end":96},"obj":"Protein"},{"id":"T2754","span":{"begin":148,"end":151},"obj":"Protein"},{"id":"T2748","span":{"begin":148,"end":159},"obj":"Entity"},{"id":"T2716","span":{"begin":174,"end":179},"obj":"Entity"},{"id":"T2705","span":{"begin":40,"end":59},"obj":"Protein"}],"relations":[{"id":"R2152","pred":"themeOf","subj":"T2759","obj":"T2786"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2047","span":{"begin":251,"end":252},"obj":"."},{"id":"T2046","span":{"begin":250,"end":251},"obj":"NNP"},{"id":"T2045","span":{"begin":249,"end":250},"obj":"CD"},{"id":"T2044","span":{"begin":248,"end":249},"obj":"NN"},{"id":"T2043","span":{"begin":246,"end":247},"obj":"NNP"},{"id":"T2042","span":{"begin":245,"end":246},"obj":"CD"},{"id":"T2041","span":{"begin":244,"end":245},"obj":"NNP"},{"id":"T2040","span":{"begin":240,"end":243},"obj":"NNP"},{"id":"T2039","span":{"begin":234,"end":239},"obj":"NNP"},{"id":"T2038","span":{"begin":230,"end":233},"obj":"DT"},{"id":"T2037","span":{"begin":227,"end":229},"obj":"IN"},{"id":"T2036","span":{"begin":216,"end":226},"obj":"NN"},{"id":"T2035","span":{"begin":200,"end":215},"obj":"JJ"},{"id":"T2034","span":{"begin":197,"end":199},"obj":"IN"},{"id":"T2033","span":{"begin":190,"end":196},"obj":"VBP"},{"id":"T2032","span":{"begin":185,"end":189},"obj":"RB"},{"id":"T2031","span":{"begin":180,"end":184},"obj":"WDT"},{"id":"T2030","span":{"begin":174,"end":179},"obj":"NNS"},{"id":"T2028","span":{"begin":160,"end":163},"obj":"CC"},{"id":"T2027","span":{"begin":154,"end":159},"obj":"NNS"},{"id":"T2026","span":{"begin":152,"end":153},"obj":"NNP"},{"id":"T2025","span":{"begin":148,"end":151},"obj":"NNP"},{"id":"T2024","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T2023","span":{"begin":136,"end":144},"obj":"NNS"},{"id":"T2022","span":{"begin":123,"end":135},"obj":"NN"},{"id":"T2021","span":{"begin":116,"end":122},"obj":"NN"},{"id":"T2020","span":{"begin":107,"end":115},"obj":"VBP"},{"id":"T2019","span":{"begin":97,"end":106},"obj":"NN"},{"id":"T2018","span":{"begin":93,"end":96},"obj":"NNP"},{"id":"T2017","span":{"begin":90,"end":92},"obj":"TO"},{"id":"T2016","span":{"begin":81,"end":89},"obj":"NN"},{"id":"T2015","span":{"begin":78,"end":80},"obj":"IN"},{"id":"T2014","span":{"begin":73,"end":77},"obj":"NN"},{"id":"T2013","span":{"begin":67,"end":72},"obj":"JJ"},{"id":"T2012","span":{"begin":63,"end":66},"obj":"DT"},{"id":"T2011","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T2010","span":{"begin":51,"end":59},"obj":"VBN"},{"id":"T2009","span":{"begin":40,"end":50},"obj":"NNS"},{"id":"T2008","span":{"begin":36,"end":39},"obj":"CC"},{"id":"T2007","span":{"begin":26,"end":35},"obj":"NNS"},{"id":"T2006","span":{"begin":13,"end":25},"obj":"JJ"},{"id":"T2005","span":{"begin":11,"end":12},"obj":","},{"id":"T2004","span":{"begin":0,"end":11},"obj":"RB"},{"id":"T2029","span":{"begin":164,"end":173},"obj":"JJ"}],"relations":[{"id":"R1452","pred":"acl","subj":"T2010","obj":"T2009"},{"id":"R1454","pred":"agent","subj":"T2011","obj":"T2010"},{"id":"R1455","pred":"det","subj":"T2012","obj":"T2014"},{"id":"R1457","pred":"amod","subj":"T2013","obj":"T2014"},{"id":"R1458","pred":"pobj","subj":"T2014","obj":"T2011"},{"id":"R1459","pred":"prep","subj":"T2015","obj":"T2010"},{"id":"R1461","pred":"pobj","subj":"T2016","obj":"T2015"},{"id":"R1462","pred":"prep","subj":"T2017","obj":"T2016"},{"id":"R1463","pred":"dep","subj":"T2018","obj":"T2020"},{"id":"R1465","pred":"compound","subj":"T2019","obj":"T2020"},{"id":"R1466","pred":"ROOT","subj":"T2020","obj":"T2020"},{"id":"R1467","pred":"nmod","subj":"T2021","obj":"T2023"},{"id":"R1468","pred":"compound","subj":"T2022","obj":"T2023"},{"id":"R1469","pred":"dobj","subj":"T2023","obj":"T2020"},{"id":"R1470","pred":"prep","subj":"T2024","obj":"T2023"},{"id":"R1472","pred":"compound","subj":"T2025","obj":"T2026"},{"id":"R1473","pred":"compound","subj":"T2026","obj":"T2027"},{"id":"R1474","pred":"pobj","subj":"T2027","obj":"T2024"},{"id":"R1476","pred":"cc","subj":"T2028","obj":"T2027"},{"id":"R1477","pred":"amod","subj":"T2029","obj":"T2030"},{"id":"R1478","pred":"conj","subj":"T2030","obj":"T2027"},{"id":"R1480","pred":"nsubj","subj":"T2031","obj":"T2033"},{"id":"R1481","pred":"advmod","subj":"T2032","obj":"T2033"},{"id":"R1482","pred":"relcl","subj":"T2033","obj":"T2023"},{"id":"R1483","pred":"prep","subj":"T2034","obj":"T2033"},{"id":"R1485","pred":"amod","subj":"T2035","obj":"T2036"},{"id":"R1486","pred":"pobj","subj":"T2036","obj":"T2034"},{"id":"R1488","pred":"prep","subj":"T2037","obj":"T2036"},{"id":"R1489","pred":"det","subj":"T2038","obj":"T2046"},{"id":"R1490","pred":"compound","subj":"T2039","obj":"T2041"},{"id":"R1491","pred":"compound","subj":"T2040","obj":"T2041"},{"id":"R1493","pred":"compound","subj":"T2041","obj":"T2046"},{"id":"R1494","pred":"nummod","subj":"T2042","obj":"T2043"},{"id":"R1495","pred":"nmod","subj":"T2043","obj":"T2044"},{"id":"R1497","pred":"nmod","subj":"T2044","obj":"T2046"},{"id":"R1498","pred":"nummod","subj":"T2045","obj":"T2044"},{"id":"R1499","pred":"pobj","subj":"T2046","obj":"T2037"},{"id":"R1501","pred":"punct","subj":"T2047","obj":"T2020"},{"id":"R1443","pred":"advmod","subj":"T2004","obj":"T2020"},{"id":"R1444","pred":"punct","subj":"T2005","obj":"T2020"},{"id":"R1446","pred":"amod","subj":"T2006","obj":"T2007"},{"id":"R1447","pred":"nsubj","subj":"T2007","obj":"T2020"},{"id":"R1448","pred":"cc","subj":"T2008","obj":"T2007"},{"id":"R1450","pred":"conj","subj":"T2009","obj":"T2007"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1881","span":{"begin":148,"end":153},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    testone

    {"project":"testone","denotations":[{"id":"T854","span":{"begin":148,"end":151},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}

    test3

    {"project":"test3","denotations":[{"id":"T899","span":{"begin":148,"end":151},"obj":"Protein"},{"id":"T880","span":{"begin":148,"end":151},"obj":"Protein"}],"text":"Furthermore, inflammatory cytokines and chemokines produced by the human host in response to MTb infection activate signal transduction pathways in CD4 T cells and monocytic cells that also result in transcriptional activation of the HIV-1 LTR [4]–[6]."}