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PMC:3320587 / 21970-22077 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T22523 94-106 NN denotes co-infection
T22522 90-93 NN denotes MTb
T22521 83-89 IN denotes during
T22520 71-82 NN denotes replication
T22519 65-70 NN denotes HIV-1
T22518 57-64 VB denotes impairs
T22517 51-56 NN denotes NFAT5
T22516 48-50 IN denotes of
T22515 38-47 NN denotes knockdown
T22514 34-37 CC denotes and
T22513 23-33 NN denotes expression
T22512 18-22 NN denotes gene
T22511 12-17 NN denotes NFAT5
T22510 4-11 VB denotes induces
T22509 0-3 NN denotes MTb
T15098 23-33 NN denotes expression
T15097 18-22 NN denotes gene
T15096 12-17 NN denotes NFAT5
T15095 4-11 VB denotes induces
T15094 0-3 NN denotes MTb
R10983 T15094 T15095 arg1Of MTb,induces
R10985 T15098 T15095 arg2Of expression,induces
R10986 T15098 T15096 arg1Of expression,NFAT5
R10987 T15098 T15097 arg1Of expression,gene
R16579 T22509 T22510 arg1Of MTb,induces
R16580 T22510 T22514 arg1Of induces,and
R16581 T22513 T22510 arg2Of expression,induces
R16582 T22513 T22511 arg1Of expression,NFAT5
R16583 T22513 T22512 arg1Of expression,gene
R16584 T22515 T22516 arg1Of knockdown,of
R16585 T22515 T22518 arg1Of knockdown,impairs
R16586 T22517 T22516 arg2Of NFAT5,of
R16587 T22518 T22514 arg2Of impairs,and
R16588 T22518 T22521 arg1Of impairs,during
R16589 T22520 T22518 arg2Of replication,impairs
R16590 T22520 T22519 arg1Of replication,HIV-1
R16591 T22523 T22521 arg2Of co-infection,during
R16592 T22523 T22522 arg1Of co-infection,MTb

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T22447 51-56 Protein denotes NFAT5
T22446 12-17 Protein denotes NFAT5
T14904 12-17 Protein denotes NFAT5

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15604 12-17 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T22880 51-56 http://www.uniprot.org/uniprot/O94916 denotes NFAT5
T22879 12-17 http://www.uniprot.org/uniprot/O94916 denotes NFAT5

GO-BP

Id Subject Object Predicate Lexical cue
T14959 18-33 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T22462 18-33 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

sentences

Id Subject Object Predicate Lexical cue
T22397 0-107 Sentence denotes MTb induces NFAT5 gene expression and knockdown of NFAT5 impairs HIV-1 replication during MTb co-infection.

simple1

Id Subject Object Predicate Lexical cue
T22478 51-56 Protein denotes NFAT5
T22477 12-17 Protein denotes NFAT5
T14984 12-17 Protein denotes NFAT5

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T23497 23-33 Gene_expression denotes expression
T23496 38-47 Negative_regulation denotes knockdown
T23495 4-11 Positive_regulation denotes induces
T23480 51-56 Protein denotes NFAT5
T23479 12-17 Protein denotes NFAT5
T16740 23-33 Gene_expression denotes expression
T16739 4-11 Positive_regulation denotes induces
T16684 12-17 Protein denotes NFAT5
R12363 T16684 T16740 themeOf NFAT5,expression
R12414 T16740 T16739 themeOf expression,induces
R17485 T23479 T23497 themeOf NFAT5,expression
R17486 T23480 T23496 themeOf NFAT5,knockdown
R17503 T23497 T23495 themeOf expression,induces

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T22976 23-33 Gene_expression denotes expression
T22975 57-64 Negative_regulation denotes impairs
T22974 4-11 Positive_regulation denotes induces
T22973 38-47 Negative_regulation denotes knockdown
T15823 23-33 Gene_expression denotes expression
T15822 4-11 Positive_regulation denotes induces
T15767 12-17 Protein denotes NFAT5
T22958 51-56 Protein denotes NFAT5
T22957 12-17 Protein denotes NFAT5
R11603 T15767 T15823 themeOf NFAT5,expression
R11645 T15823 T15822 themeOf expression,induces
R16994 T22957 T22976 themeOf NFAT5,expression
R16995 T22958 T22973 themeOf NFAT5,knockdown
R17010 T22973 T22974 causeOf knockdown,induces
R17011 T22973 T22974 causeOf knockdown,induces
R17012 T22973 T22975 causeOf knockdown,impairs
R17013 T22973 T22975 causeOf knockdown,impairs
R17014 T22976 T22974 themeOf expression,induces
R17015 T22976 T22974 themeOf expression,induces
R17016 T22976 T22973 themeOf expression,knockdown
R17017 T22976 T22975 themeOf expression,impairs
R17018 T22976 T22975 themeOf expression,impairs

DLUT931

Id Subject Object Predicate Lexical cue
T22913 4-11 Positive_regulation denotes induces
T22912 38-47 Negative_regulation denotes knockdown
T22911 23-33 Gene_expression denotes expression
T22896 51-56 Protein denotes NFAT5
T22895 12-17 Protein denotes NFAT5
T15708 4-11 Positive_regulation denotes induces
T15707 23-33 Gene_expression denotes expression
T15652 12-17 Protein denotes NFAT5
R11551 T15707 T15708 themeOf expression,induces
R16974 T22911 T22913 themeOf expression,induces
R11501 T15652 T15707 themeOf NFAT5,expression
R16960 T22895 T22911 themeOf NFAT5,expression
R16961 T22896 T22912 themeOf NFAT5,knockdown

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T23575 90-106 Regulation denotes MTb co-infection
T23572 12-33 Gene_expression denotes NFAT5 gene expression
T23562 0-3 Protein denotes MTb
T23552 90-93 Protein denotes MTb
T23548 12-17 Protein denotes NFAT5
T23544 48-56 Protein denotes of NFAT5
T16896 12-33 Gene_expression denotes NFAT5 gene expression
T16848 12-17 Protein denotes NFAT5
T16832 0-3 Protein denotes MTb
R12446 T16848 T16896 themeOf NFAT5,NFAT5 gene expression
R17517 T23548 T23572 themeOf NFAT5,NFAT5 gene expression
R17518 T23552 T23575 themeOf MTb,MTb co-infection

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T23093 106-107 . denotes .
T23092 94-106 NN denotes co-infection
T23091 90-93 NNP denotes MTb
T23090 83-89 IN denotes during
T23089 71-82 NN denotes replication
T23088 65-70 JJ denotes HIV-1
T23087 57-64 NNS denotes impairs
T23086 51-56 CD denotes NFAT5
T23085 48-50 IN denotes of
T23084 38-47 NN denotes knockdown
T23083 34-37 CC denotes and
T23082 23-33 NN denotes expression
T23081 18-22 NN denotes gene
T23080 12-17 NNP denotes NFAT5
T23079 4-11 VBZ denotes induces
T23078 0-3 NNP denotes MTb
T16157 23-33 NN denotes expression
T16156 18-22 NN denotes gene
T16155 12-17 NNP denotes NFAT5
T16154 4-11 VBZ denotes induces
T16153 0-3 NNP denotes MTb
R11832 T16153 T16154 nsubj MTb,induces
R11833 T16154 T16154 ROOT induces,induces
R11834 T16155 T16157 compound NFAT5,expression
R11835 T16156 T16157 compound gene,expression
R11836 T16157 T16154 dobj expression,induces
R17084 T23078 T23079 nsubj MTb,induces
R17085 T23079 T23079 ROOT induces,induces
R17086 T23080 T23082 compound NFAT5,expression
R17087 T23081 T23082 compound gene,expression
R17088 T23082 T23079 dobj expression,induces
R17089 T23083 T23082 cc and,expression
R17090 T23084 T23082 conj knockdown,expression
R17091 T23085 T23082 prep of,expression
R17092 T23086 T23087 nummod NFAT5,impairs
R17093 T23087 T23085 pobj impairs,of
R17094 T23088 T23089 compound HIV-1,replication
R17095 T23089 T23087 pobj replication,impairs
R17096 T23090 T23089 prep during,replication
R17097 T23091 T23092 compound MTb,co-infection
R17098 T23092 T23090 pobj co-infection,during
R17099 T23093 T23079 punct .,induces

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T22994 23-33 Gene_expression denotes expression
T22993 51-70 Protein denotes NFAT5 impairs HIV-1
T22992 12-22 Protein denotes NFAT5 gene
T15946 4-11 Positive_regulation denotes induces
T15945 23-33 Gene_expression denotes expression
T15943 12-22 Protein denotes NFAT5 gene
T22995 4-11 Positive_regulation denotes induces
R11696 T15943 T15945 themeOf NFAT5 gene,expression
R11697 T15945 T15946 themeOf expression,induces
R17030 T22992 T22994 themeOf NFAT5 gene,expression
R17031 T22994 T22995 themeOf expression,induces

testone

Id Subject Object Predicate Lexical cue
T22350 4-11 Positive_regulation denotes induces
T22335 51-56 Protein denotes NFAT5
T22334 12-17 Protein denotes NFAT5
T14596 4-11 Positive_regulation denotes induces
T14541 12-17 Protein denotes NFAT5

test3

Id Subject Object Predicate Lexical cue
T22377 51-56 Protein denotes NFAT5
T22376 12-17 Protein denotes NFAT5
T22361 51-56 Protein denotes NFAT5
T22360 12-17 Protein denotes NFAT5
T14685 12-17 Protein denotes NFAT5
T14630 12-17 Protein denotes NFAT5