PMC:3320587 / 16640-16794 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/3320587","sourcedb":"PMC","sourceid":"3320587","source_url":"http://www.ncbi.nlm.nih.gov/pmc/3320587","text":"HIV-1 LTRs (−208 to +64 nt relative to the transcription start site) from representative subtype B, C, and E viral isolates were cloned into plasmid pGL3.","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T21182","span":{"begin":149,"end":153},"obj":"NN"},{"id":"T21181","span":{"begin":141,"end":148},"obj":"NN"},{"id":"T21180","span":{"begin":136,"end":140},"obj":"IN"},{"id":"T21179","span":{"begin":129,"end":135},"obj":"VB"},{"id":"T21178","span":{"begin":124,"end":128},"obj":"VB"},{"id":"T21177","span":{"begin":115,"end":123},"obj":"NN"},{"id":"T21176","span":{"begin":109,"end":114},"obj":"JJ"},{"id":"T21175","span":{"begin":107,"end":108},"obj":"NN"},{"id":"T21174","span":{"begin":103,"end":106},"obj":"CC"},{"id":"T21173","span":{"begin":101,"end":102},"obj":"-COMMA-"},{"id":"T21172","span":{"begin":100,"end":101},"obj":"NN"},{"id":"T21171","span":{"begin":98,"end":99},"obj":"-COMMA-"},{"id":"T21170","span":{"begin":97,"end":98},"obj":"NN"},{"id":"T21169","span":{"begin":89,"end":96},"obj":"NN"},{"id":"T21168","span":{"begin":74,"end":88},"obj":"JJ"},{"id":"T21167","span":{"begin":69,"end":73},"obj":"IN"},{"id":"T21166","span":{"begin":67,"end":68},"obj":"-RRB-"},{"id":"T21165","span":{"begin":63,"end":67},"obj":"NN"},{"id":"T21164","span":{"begin":57,"end":62},"obj":"NN"},{"id":"T21163","span":{"begin":43,"end":56},"obj":"NN"},{"id":"T21162","span":{"begin":39,"end":42},"obj":"DT"},{"id":"T21161","span":{"begin":36,"end":38},"obj":"TO"},{"id":"T21160","span":{"begin":27,"end":35},"obj":"JJ"},{"id":"T21159","span":{"begin":24,"end":26},"obj":"NN"},{"id":"T21158","span":{"begin":20,"end":23},"obj":"CD"},{"id":"T21157","span":{"begin":17,"end":19},"obj":"TO"},{"id":"T21156","span":{"begin":12,"end":16},"obj":"CD"},{"id":"T21155","span":{"begin":11,"end":12},"obj":"-LRB-"},{"id":"T21154","span":{"begin":6,"end":10},"obj":"NN"},{"id":"T21153","span":{"begin":0,"end":5},"obj":"NN"}],"relations":[{"id":"R15502","pred":"arg1Of","subj":"T21154","obj":"T21153"},{"id":"R15503","pred":"arg1Of","subj":"T21154","obj":"T21155"},{"id":"R15504","pred":"arg1Of","subj":"T21154","obj":"T21167"},{"id":"R15505","pred":"arg1Of","subj":"T21156","obj":"T21157"},{"id":"R15506","pred":"arg2Of","subj":"T21158","obj":"T21157"},{"id":"R15507","pred":"arg2Of","subj":"T21159","obj":"T21155"},{"id":"R15508","pred":"arg1Of","subj":"T21159","obj":"T21156"},{"id":"R15509","pred":"arg1Of","subj":"T21159","obj":"T21160"},{"id":"R15510","pred":"arg1Of","subj":"T21160","obj":"T21161"},{"id":"R15511","pred":"arg2Of","subj":"T21165","obj":"T21161"},{"id":"R15512","pred":"arg1Of","subj":"T21165","obj":"T21162"},{"id":"R15513","pred":"arg1Of","subj":"T21165","obj":"T21163"},{"id":"R15514","pred":"arg1Of","subj":"T21165","obj":"T21164"},{"id":"R15515","pred":"arg3Of","subj":"T21166","obj":"T21155"},{"id":"R15516","pred":"arg2Of","subj":"T21170","obj":"T21167"},{"id":"R15517","pred":"arg1Of","subj":"T21170","obj":"T21168"},{"id":"R15518","pred":"arg1Of","subj":"T21170","obj":"T21169"},{"id":"R15520","pred":"arg2Of","subj":"T21172","obj":"T21171"},{"id":"R15521","pred":"arg1Of","subj":"T21174","obj":"T21173"},{"id":"R15522","pred":"arg1Of","subj":"T21177","obj":"T21175"},{"id":"R15523","pred":"arg1Of","subj":"T21177","obj":"T21176"},{"id":"R15524","pred":"arg1Of","subj":"T21177","obj":"T21178"},{"id":"R15525","pred":"arg2Of","subj":"T21177","obj":"T21179"},{"id":"R15526","pred":"arg2Of","subj":"T21179","obj":"T21174"},{"id":"R15527","pred":"arg2Of","subj":"T21179","obj":"T21178"},{"id":"R15528","pred":"arg1Of","subj":"T21179","obj":"T21180"},{"id":"R15529","pred":"arg2Of","subj":"T21182","obj":"T21180"},{"id":"R15530","pred":"arg1Of","subj":"T21182","obj":"T21181"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T21182","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21181","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21180","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21179","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21178","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21177","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21176","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21175","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21174","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21173","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21172","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21171","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21170","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21169","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21168","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21167","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21166","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21165","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21164","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21163","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21162","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21161","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21160","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21159","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21158","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21157","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21156","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21155","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21154","pred":"source","obj":"pmc-enju-pas"},{"subj":"T21153","pred":"source","obj":"pmc-enju-pas"}]},{"project":"sentences","denotations":[{"id":"T107","span":{"begin":0,"end":154},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T107","pred":"source","obj":"sentences"}]},{"project":"GO-BP","denotations":[{"id":"T21080","span":{"begin":43,"end":56},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T21080","pred":"source","obj":"GO-BP"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T21775","span":{"begin":153,"end":154},"obj":"."},{"id":"T21774","span":{"begin":149,"end":153},"obj":"NN"},{"id":"T21773","span":{"begin":141,"end":148},"obj":"JJ"},{"id":"T21772","span":{"begin":136,"end":140},"obj":"IN"},{"id":"T21771","span":{"begin":129,"end":135},"obj":"VBN"},{"id":"T21770","span":{"begin":124,"end":128},"obj":"VBD"},{"id":"T21769","span":{"begin":115,"end":123},"obj":"VBZ"},{"id":"T21768","span":{"begin":109,"end":114},"obj":"JJ"},{"id":"T21767","span":{"begin":107,"end":108},"obj":"NNP"},{"id":"T21766","span":{"begin":103,"end":106},"obj":"CC"},{"id":"T21765","span":{"begin":101,"end":102},"obj":","},{"id":"T21764","span":{"begin":100,"end":101},"obj":"NNP"},{"id":"T21763","span":{"begin":98,"end":99},"obj":","},{"id":"T21762","span":{"begin":97,"end":98},"obj":"NNP"},{"id":"T21761","span":{"begin":89,"end":96},"obj":"NN"},{"id":"T21760","span":{"begin":74,"end":88},"obj":"NN"},{"id":"T21759","span":{"begin":69,"end":73},"obj":"IN"},{"id":"T21758","span":{"begin":67,"end":68},"obj":"-RRB-"},{"id":"T21757","span":{"begin":63,"end":67},"obj":"NN"},{"id":"T21756","span":{"begin":57,"end":62},"obj":"VB"},{"id":"T21755","span":{"begin":43,"end":56},"obj":"NN"},{"id":"T21754","span":{"begin":39,"end":42},"obj":"DT"},{"id":"T21753","span":{"begin":36,"end":38},"obj":"TO"},{"id":"T21752","span":{"begin":27,"end":35},"obj":"JJ"},{"id":"T21751","span":{"begin":24,"end":26},"obj":"NN"},{"id":"T21750","span":{"begin":20,"end":23},"obj":"CD"},{"id":"T21749","span":{"begin":17,"end":19},"obj":"TO"},{"id":"T21748","span":{"begin":13,"end":16},"obj":"CD"},{"id":"T21747","span":{"begin":12,"end":13},"obj":"FW"},{"id":"T21746","span":{"begin":11,"end":12},"obj":"-LRB-"},{"id":"T21745","span":{"begin":6,"end":10},"obj":"NNP"},{"id":"T21744","span":{"begin":0,"end":5},"obj":"NNP"}],"relations":[{"id":"R16041","pred":"compound","subj":"T21744","obj":"T21745"},{"id":"R16043","pred":"punct","subj":"T21746","obj":"T21745"},{"id":"R16044","pred":"nmod","subj":"T21747","obj":"T21751"},{"id":"R16045","pred":"quantmod","subj":"T21748","obj":"T21750"},{"id":"R16046","pred":"quantmod","subj":"T21749","obj":"T21750"},{"id":"R16047","pred":"nummod","subj":"T21750","obj":"T21751"},{"id":"R16048","pred":"nsubjpass","subj":"T21751","obj":"T21771"},{"id":"R16049","pred":"amod","subj":"T21752","obj":"T21751"},{"id":"R16050","pred":"aux","subj":"T21753","obj":"T21756"},{"id":"R16051","pred":"det","subj":"T21754","obj":"T21755"},{"id":"R16052","pred":"nsubj","subj":"T21755","obj":"T21756"},{"id":"R16053","pred":"acl","subj":"T21756","obj":"T21751"},{"id":"R16054","pred":"dobj","subj":"T21757","obj":"T21756"},{"id":"R16055","pred":"punct","subj":"T21758","obj":"T21756"},{"id":"R16056","pred":"prep","subj":"T21759","obj":"T21756"},{"id":"R16057","pred":"compound","subj":"T21760","obj":"T21762"},{"id":"R16058","pred":"compound","subj":"T21761","obj":"T21762"},{"id":"R16059","pred":"pobj","subj":"T21762","obj":"T21759"},{"id":"R16060","pred":"punct","subj":"T21763","obj":"T21764"},{"id":"R16061","pred":"appos","subj":"T21764","obj":"T21762"},{"id":"R16062","pred":"punct","subj":"T21765","obj":"T21764"},{"id":"R16063","pred":"cc","subj":"T21766","obj":"T21764"},{"id":"R16064","pred":"compound","subj":"T21767","obj":"T21768"},{"id":"R16066","pred":"relcl","subj":"T21769","obj":"T21762"},{"id":"R16067","pred":"auxpass","subj":"T21770","obj":"T21771"},{"id":"R16068","pred":"ROOT","subj":"T21771","obj":"T21771"},{"id":"R16069","pred":"prep","subj":"T21772","obj":"T21771"},{"id":"R16070","pred":"amod","subj":"T21773","obj":"T21774"},{"id":"R16071","pred":"pobj","subj":"T21774","obj":"T21772"},{"id":"R16072","pred":"punct","subj":"T21775","obj":"T21771"},{"id":"R16065","pred":"compound","subj":"T21768","obj":"T21769"}],"attributes":[{"subj":"T21775","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21774","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21773","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21772","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21771","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21770","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21769","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21768","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21767","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21766","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21765","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21764","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21763","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21762","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21761","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21760","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21759","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21758","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21757","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21756","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21755","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21754","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21753","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21752","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21751","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21750","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21749","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21748","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21747","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21746","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21745","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T21744","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T22289","span":{"begin":141,"end":153},"obj":"Protein"},{"id":"T22263","span":{"begin":63,"end":67},"obj":"Entity"}],"attributes":[{"subj":"T22289","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T22263","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#93ecbc","default":true},{"id":"sentences","color":"#eca193"},{"id":"GO-BP","color":"#939eec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#b8ec93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#ec93d2"}]}]}}