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PMC:3320587 / 16640-16794 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T21182 149-153 NN denotes pGL3
T21181 141-148 NN denotes plasmid
T21180 136-140 IN denotes into
T21179 129-135 VB denotes cloned
T21178 124-128 VB denotes were
T21177 115-123 NN denotes isolates
T21176 109-114 JJ denotes viral
T21175 107-108 NN denotes E
T21174 103-106 CC denotes and
T21173 101-102 -COMMA- denotes ,
T21172 100-101 NN denotes C
T21171 98-99 -COMMA- denotes ,
T21170 97-98 NN denotes B
T21169 89-96 NN denotes subtype
T21168 74-88 JJ denotes representative
T21167 69-73 IN denotes from
T21166 67-68 -RRB- denotes )
T21165 63-67 NN denotes site
T21164 57-62 NN denotes start
T21163 43-56 NN denotes transcription
T21162 39-42 DT denotes the
T21161 36-38 TO denotes to
T21160 27-35 JJ denotes relative
T21159 24-26 NN denotes nt
T21158 20-23 CD denotes +64
T21157 17-19 TO denotes to
T21156 12-16 CD denotes −208
T21155 11-12 -LRB- denotes (
T21154 6-10 NN denotes LTRs
T21153 0-5 NN denotes HIV-1
R15502 T21154 T21153 arg1Of LTRs,HIV-1
R15503 T21154 T21155 arg1Of LTRs,(
R15504 T21154 T21167 arg1Of LTRs,from
R15505 T21156 T21157 arg1Of −208,to
R15506 T21158 T21157 arg2Of +64,to
R15507 T21159 T21155 arg2Of nt,(
R15508 T21159 T21156 arg1Of nt,−208
R15509 T21159 T21160 arg1Of nt,relative
R15510 T21160 T21161 arg1Of relative,to
R15511 T21165 T21161 arg2Of site,to
R15512 T21165 T21162 arg1Of site,the
R15513 T21165 T21163 arg1Of site,transcription
R15514 T21165 T21164 arg1Of site,start
R15515 T21166 T21155 arg3Of ),(
R15516 T21170 T21167 arg2Of B,from
R15517 T21170 T21168 arg1Of B,representative
R15518 T21170 T21169 arg1Of B,subtype
R15520 T21172 T21171 arg2Of C,","
R15521 T21174 T21173 arg1Of and,","
R15522 T21177 T21175 arg1Of isolates,E
R15523 T21177 T21176 arg1Of isolates,viral
R15524 T21177 T21178 arg1Of isolates,were
R15525 T21177 T21179 arg2Of isolates,cloned
R15526 T21179 T21174 arg2Of cloned,and
R15527 T21179 T21178 arg2Of cloned,were
R15528 T21179 T21180 arg1Of cloned,into
R15529 T21182 T21180 arg2Of pGL3,into
R15530 T21182 T21181 arg1Of pGL3,plasmid

GO-BP

Id Subject Object Predicate Lexical cue
T21080 43-56 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

sentences

Id Subject Object Predicate Lexical cue
T107 0-154 Sentence denotes HIV-1 LTRs (−208 to +64 nt relative to the transcription start site) from representative subtype B, C, and E viral isolates were cloned into plasmid pGL3.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T22289 141-153 Protein denotes plasmid pGL3
T22263 63-67 Entity denotes site

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21775 153-154 . denotes .
T21774 149-153 NN denotes pGL3
T21773 141-148 JJ denotes plasmid
T21772 136-140 IN denotes into
T21771 129-135 VBN denotes cloned
T21770 124-128 VBD denotes were
T21769 115-123 VBZ denotes isolates
T21768 109-114 JJ denotes viral
T21767 107-108 NNP denotes E
T21766 103-106 CC denotes and
T21765 101-102 , denotes ,
T21764 100-101 NNP denotes C
T21763 98-99 , denotes ,
T21762 97-98 NNP denotes B
T21761 89-96 NN denotes subtype
T21760 74-88 NN denotes representative
T21759 69-73 IN denotes from
T21758 67-68 -RRB- denotes )
T21757 63-67 NN denotes site
T21756 57-62 VB denotes start
T21755 43-56 NN denotes transcription
T21754 39-42 DT denotes the
T21753 36-38 TO denotes to
T21752 27-35 JJ denotes relative
T21751 24-26 NN denotes nt
T21750 20-23 CD denotes +64
T21749 17-19 TO denotes to
T21748 13-16 CD denotes 208
T21747 12-13 FW denotes −
T21746 11-12 -LRB- denotes (
T21745 6-10 NNP denotes LTRs
T21744 0-5 NNP denotes HIV-1
R16041 T21744 T21745 compound HIV-1,LTRs
R16043 T21746 T21745 punct (,LTRs
R16044 T21747 T21751 nmod −,nt
R16045 T21748 T21750 quantmod 208,+64
R16046 T21749 T21750 quantmod to,+64
R16047 T21750 T21751 nummod +64,nt
R16048 T21751 T21771 nsubjpass nt,cloned
R16049 T21752 T21751 amod relative,nt
R16050 T21753 T21756 aux to,start
R16051 T21754 T21755 det the,transcription
R16052 T21755 T21756 nsubj transcription,start
R16053 T21756 T21751 acl start,nt
R16054 T21757 T21756 dobj site,start
R16055 T21758 T21756 punct ),start
R16056 T21759 T21756 prep from,start
R16057 T21760 T21762 compound representative,B
R16058 T21761 T21762 compound subtype,B
R16059 T21762 T21759 pobj B,from
R16060 T21763 T21764 punct ",",C
R16061 T21764 T21762 appos C,B
R16062 T21765 T21764 punct ",",C
R16063 T21766 T21764 cc and,C
R16064 T21767 T21768 compound E,viral
R16066 T21769 T21762 relcl isolates,B
R16067 T21770 T21771 auxpass were,cloned
R16068 T21771 T21771 ROOT cloned,cloned
R16069 T21772 T21771 prep into,cloned
R16070 T21773 T21774 amod plasmid,pGL3
R16071 T21774 T21772 pobj pGL3,into
R16072 T21775 T21771 punct .,cloned
R16065 T21768 T21769 compound viral,isolates