> top > docs > PMC:3317373 > spans > 7271-7483 > annotations

PMC:3317373 / 7271-7483 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3157 203-211 NN denotes protocol
T3156 200-202 POS denotes 's
T3155 188-200 NN denotes manufacturer
T3154 184-187 DT denotes the
T3153 181-183 TO denotes to
T3152 171-180 VB denotes according
T3151 169-170 -RRB- denotes )
T3150 164-169 NNP denotes China
T3149 162-163 -COMMA- denotes ,
T3148 155-162 NNP denotes Jiangsu
T3147 153-154 -COMMA- denotes ,
T3146 145-153 NNP denotes Biunique
T3145 144-145 -LRB- denotes (
T3144 137-143 NN denotes RT-Kit
T3143 127-136 JJ denotes BU-Script
T3142 122-126 IN denotes with
T3141 118-121 NN denotes RNA
T3140 112-117 JJ denotes total
T3139 109-111 IN denotes of
T3138 106-108 NN denotes μg
T3137 104-105 CD denotes 2
T3136 99-103 IN denotes from
T3135 87-98 VB denotes synthesized
T3134 83-86 VB denotes was
T3133 78-82 NN denotes cDNA
T3132 62-77 JJ denotes single-stranded
T3131 58-61 CC denotes and
T3130 56-57 -COMMA- denotes ,
T3129 55-56 -RRB- denotes )
T3128 52-55 NNP denotes USA
T3127 50-51 -COMMA- denotes ,
T3126 48-50 NNP denotes CA
T3125 46-47 -COMMA- denotes ,
T3124 36-46 NN denotes Invitrogen
T3123 35-36 -LRB- denotes (
T3122 28-34 NN denotes Trizol
T3121 23-27 IN denotes with
T3120 14-22 VB denotes isolated
T3119 10-13 VB denotes was
T3118 6-9 NN denotes RNA
T3117 0-5 JJ denotes Total
R2677 T3118 T3117 arg1Of RNA,Total
R2678 T3118 T3119 arg1Of RNA,was
R2679 T3118 T3120 arg2Of RNA,isolated
R2680 T3120 T3119 arg2Of isolated,was
R2681 T3120 T3121 arg1Of isolated,with
R2682 T3120 T3131 arg1Of isolated,and
R2683 T3122 T3121 arg2Of Trizol,with
R2684 T3122 T3123 arg1Of Trizol,(
R2685 T3124 T3123 arg2Of Invitrogen,(
R2686 T3124 T3125 arg1Of Invitrogen,","
R2687 T3124 T3127 arg1Of Invitrogen,","
R2688 T3124 T3128 arg1Of Invitrogen,USA
R2689 T3126 T3125 arg2Of CA,","
R2690 T3129 T3123 arg3Of ),(
R2691 T3131 T3130 arg1Of and,","
R2692 T3131 T3145 arg1Of and,(
R2693 T3131 T3152 arg1Of and,according
R2694 T3133 T3132 arg1Of cDNA,single-stranded
R2695 T3133 T3134 arg1Of cDNA,was
R2696 T3133 T3135 arg2Of cDNA,synthesized
R2697 T3135 T3131 arg2Of synthesized,and
R2698 T3135 T3134 arg2Of synthesized,was
R2699 T3135 T3136 arg1Of synthesized,from
R2700 T3138 T3136 arg2Of μg,from
R2701 T3138 T3137 arg1Of μg,2
R2702 T3138 T3139 arg1Of μg,of
R2703 T3141 T3139 arg2Of RNA,of
R2704 T3141 T3140 arg1Of RNA,total
R2705 T3141 T3142 arg1Of RNA,with
R2706 T3144 T3142 arg2Of RT-Kit,with
R2707 T3144 T3143 arg1Of RT-Kit,BU-Script
R2708 T3146 T3147 arg1Of Biunique,","
R2709 T3147 T3145 arg2Of ",",(
R2710 T3147 T3149 arg1Of ",",","
R2711 T3148 T3147 arg2Of Jiangsu,","
R2712 T3150 T3149 arg2Of China,","
R2713 T3151 T3145 arg3Of ),(
R2714 T3153 T3152 arg2Of to,according
R2715 T3155 T3154 arg1Of manufacturer,the
R2716 T3155 T3156 arg2Of manufacturer,'s
R2717 T3157 T3153 arg2Of protocol,to
R2718 T3157 T3156 arg1Of protocol,'s

GO-BP

Id Subject Object Predicate Lexical cue
T3112 48-50 http://purl.obolibrary.org/obo/GO_0033968 denotes CA
T3111 137-139 http://purl.obolibrary.org/obo/GO_0003964 denotes RT

GO-MF

Id Subject Object Predicate Lexical cue
T3224 48-50 http://purl.obolibrary.org/obo/GO_0033968 denotes CA
T3223 137-139 http://purl.obolibrary.org/obo/GO_0003964 denotes RT

sentences

Id Subject Object Predicate Lexical cue
T3102 0-212 Sentence denotes Total RNA was isolated with Trizol (Invitrogen, CA, USA), and single-stranded cDNA was synthesized from 2 μg of total RNA with BU-Script RT-Kit (Biunique, Jiangsu, China) according to the manufacturer's protocol.
T76 0-212 Sentence denotes Total RNA was isolated with Trizol (Invitrogen, CA, USA), and single-stranded cDNA was synthesized from 2 μg of total RNA with BU-Script RT-Kit (Biunique, Jiangsu, China) according to the manufacturer's protocol.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T3366 0-9 Protein denotes Total RNA
T3364 62-82 Entity denotes single-stranded cDNA
T3362 109-121 Protein denotes of total RNA
T3361 28-47 Entity denotes Trizol (Invitrogen,
T3360 127-170 Protein denotes BU-Script RT-Kit (Biunique, Jiangsu, China)
T3359 104-121 Protein denotes 2 μg of total RNA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3277 211-212 . denotes .
T3276 203-211 NN denotes protocol
T3275 200-202 POS denotes 's
T3274 188-200 NN denotes manufacturer
T3273 184-187 DT denotes the
T3272 181-183 TO denotes to
T3271 171-180 VBG denotes according
T3270 169-170 -RRB- denotes )
T3269 164-169 NNP denotes China
T3268 162-163 , denotes ,
T3267 155-162 NNP denotes Jiangsu
T3266 153-154 , denotes ,
T3265 145-153 NNP denotes Biunique
T3264 144-145 -LRB- denotes (
T3263 137-143 NN denotes RT-Kit
T3262 127-136 JJ denotes BU-Script
T3261 122-126 IN denotes with
T3260 118-121 NNP denotes RNA
T3259 112-117 JJ denotes total
T3258 109-111 IN denotes of
T3257 106-108 NN denotes μg
T3256 104-105 CD denotes 2
T3255 99-103 IN denotes from
T3254 87-98 VBN denotes synthesized
T3253 83-86 VBD denotes was
T3252 78-82 NNP denotes cDNA
T3251 62-77 JJ denotes single-stranded
T3250 58-61 CC denotes and
T3249 56-57 , denotes ,
T3248 55-56 -RRB- denotes )
T3247 52-55 NNP denotes USA
T3246 50-51 , denotes ,
T3245 48-50 NNP denotes CA
T3244 46-47 , denotes ,
T3243 36-46 NNP denotes Invitrogen
T3242 35-36 -LRB- denotes (
T3241 28-34 NNP denotes Trizol
T3240 23-27 IN denotes with
T3239 14-22 VBN denotes isolated
T3238 10-13 VBD denotes was
T3237 6-9 NNP denotes RNA
T3236 0-5 NNP denotes Total
R2785 T3236 T3237 compound Total,RNA
R2786 T3237 T3238 nsubj RNA,was
R2787 T3238 T3238 ROOT was,was
R2788 T3239 T3238 acomp isolated,was
R2789 T3240 T3239 prep with,isolated
R2790 T3241 T3240 pobj Trizol,with
R2791 T3242 T3254 punct (,synthesized
R2792 T3243 T3252 nmod Invitrogen,cDNA
R2793 T3244 T3243 punct ",",Invitrogen
R2794 T3245 T3243 conj CA,Invitrogen
R2795 T3246 T3245 punct ",",CA
R2796 T3247 T3245 conj USA,CA
R2797 T3248 T3245 punct ),CA
R2798 T3249 T3245 punct ",",CA
R2799 T3250 T3245 cc and,CA
R2800 T3251 T3252 compound single-stranded,cDNA
R2801 T3252 T3254 nsubjpass cDNA,synthesized
R2802 T3253 T3254 auxpass was,synthesized
R2803 T3254 T3238 parataxis synthesized,was
R2804 T3255 T3254 prep from,synthesized
R2805 T3256 T3257 nummod 2,μg
R2806 T3257 T3255 pobj μg,from
R2807 T3258 T3257 prep of,μg
R2808 T3259 T3260 amod total,RNA
R2809 T3260 T3258 pobj RNA,of
R2810 T3261 T3257 prep with,μg
R2811 T3262 T3263 amod BU-Script,RT-Kit
R2812 T3263 T3261 pobj RT-Kit,with
R2813 T3264 T3265 punct (,Biunique
R2814 T3265 T3263 appos Biunique,RT-Kit
R2815 T3266 T3265 punct ",",Biunique
R2816 T3267 T3265 conj Jiangsu,Biunique
R2817 T3268 T3267 punct ",",Jiangsu
R2818 T3269 T3267 conj China,Jiangsu
R2819 T3270 T3254 punct ),synthesized
R2820 T3271 T3238 prep according,was
R2821 T3272 T3271 prep to,according
R2822 T3273 T3274 det the,manufacturer
R2823 T3274 T3276 poss manufacturer,protocol
R2824 T3275 T3274 case 's,manufacturer
R2825 T3276 T3272 pobj protocol,to
R2826 T3277 T3238 punct .,was