PMC:3317373 / 15541-15610 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T7396","span":{"begin":59,"end":69},"obj":"NN"},{"id":"T7395","span":{"begin":50,"end":58},"obj":"VB"},{"id":"T7394","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T7393","span":{"begin":42,"end":46},"obj":"NN"},{"id":"T7392","span":{"begin":38,"end":41},"obj":"CC"},{"id":"T7391","span":{"begin":36,"end":37},"obj":"-COMMA-"},{"id":"T7390","span":{"begin":32,"end":36},"obj":"NN"},{"id":"T7389","span":{"begin":30,"end":31},"obj":"-COMMA-"},{"id":"T7388","span":{"begin":25,"end":30},"obj":"NN"},{"id":"T7387","span":{"begin":23,"end":24},"obj":"-COMMA-"},{"id":"T7386","span":{"begin":18,"end":23},"obj":"NN"},{"id":"T7385","span":{"begin":15,"end":17},"obj":"IN"},{"id":"T7384","span":{"begin":0,"end":14},"obj":"NN"}],"relations":[{"id":"R5925","pred":"arg1Of","subj":"T7384","obj":"T7385"},{"id":"R5926","pred":"arg1Of","subj":"T7386","obj":"T7387"},{"id":"R5927","pred":"arg1Of","subj":"T7387","obj":"T7389"},{"id":"R5928","pred":"arg2Of","subj":"T7388","obj":"T7387"},{"id":"R5929","pred":"arg1Of","subj":"T7389","obj":"T7392"},{"id":"R5930","pred":"arg2Of","subj":"T7390","obj":"T7389"},{"id":"R5931","pred":"arg2Of","subj":"T7392","obj":"T7385"},{"id":"R5932","pred":"arg1Of","subj":"T7392","obj":"T7391"},{"id":"R5933","pred":"arg1Of","subj":"T7392","obj":"T7394"},{"id":"R5934","pred":"arg2Of","subj":"T7393","obj":"T7392"},{"id":"R5935","pred":"arg2Of","subj":"T7396","obj":"T7394"},{"id":"R5936","pred":"arg2Of","subj":"T7396","obj":"T7395"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T7316","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T7315","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T7314","span":{"begin":25,"end":30},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T8372","span":{"begin":25,"end":30},"obj":"http://www.uniprot.org/uniprot/P01584"},{"id":"T8364","span":{"begin":18,"end":23},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T8357","span":{"begin":18,"end":21},"obj":"http://www.uniprot.org/uniprot/P01375"},{"id":"T8380","span":{"begin":32,"end":36},"obj":"http://www.uniprot.org/uniprot/P05231"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    GO-MF

    {"project":"GO-MF","denotations":[{"id":"T8282","span":{"begin":32,"end":36},"obj":"http://purl.obolibrary.org/obo/GO_0005138"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    simple1

    {"project":"simple1","denotations":[{"id":"T8331","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T8330","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T8329","span":{"begin":25,"end":30},"obj":"Protein"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T9918","span":{"begin":0,"end":14},"obj":"Gene_expression"},{"id":"T9916","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T9890","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T9889","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T9888","span":{"begin":25,"end":30},"obj":"Protein"}],"relations":[{"id":"R8146","pred":"themeOf","subj":"T9888","obj":"T9918"},{"id":"R8150","pred":"themeOf","subj":"T9889","obj":"T9918"},{"id":"R8152","pred":"themeOf","subj":"T9890","obj":"T9918"},{"id":"R8173","pred":"themeOf","subj":"T9918","obj":"T9916"},{"id":"R8174","pred":"themeOf","subj":"T9918","obj":"T9916"},{"id":"R8175","pred":"themeOf","subj":"T9918","obj":"T9916"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T8473","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T8446","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T8445","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T8444","span":{"begin":25,"end":30},"obj":"Protein"}],"relations":[{"id":"R6868","pred":"themeOf","subj":"T8444","obj":"T8473"},{"id":"R6869","pred":"themeOf","subj":"T8445","obj":"T8473"},{"id":"R6871","pred":"themeOf","subj":"T8446","obj":"T8473"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T8421","span":{"begin":0,"end":14},"obj":"Gene_expression"},{"id":"T8395","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T8394","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T8393","span":{"begin":25,"end":30},"obj":"Protein"}],"relations":[{"id":"R6818","pred":"themeOf","subj":"T8393","obj":"T8421"},{"id":"R6819","pred":"themeOf","subj":"T8394","obj":"T8421"},{"id":"R6820","pred":"themeOf","subj":"T8395","obj":"T8421"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T10073","span":{"begin":0,"end":69},"obj":"Gene_expression"},{"id":"T10072","span":{"begin":0,"end":69},"obj":"Gene_expression"},{"id":"T10071","span":{"begin":0,"end":69},"obj":"Positive_regulation"},{"id":"T10009","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T10008","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T9990","span":{"begin":50,"end":69},"obj":"Entity"},{"id":"T9974","span":{"begin":18,"end":23},"obj":"Protein"},{"id":"T9965","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T10070","span":{"begin":0,"end":69},"obj":"Positive_regulation"},{"id":"T10069","span":{"begin":0,"end":69},"obj":"Positive_regulation"},{"id":"T10068","span":{"begin":0,"end":69},"obj":"Positive_regulation"},{"id":"T10067","span":{"begin":0,"end":69},"obj":"Gene_expression"},{"id":"T10066","span":{"begin":0,"end":69},"obj":"Gene_expression"}],"relations":[{"id":"R8196","pred":"themeOf","subj":"T9965","obj":"T10066"},{"id":"R8197","pred":"themeOf","subj":"T9965","obj":"T10071"},{"id":"R8203","pred":"themeOf","subj":"T9974","obj":"T10070"},{"id":"R8204","pred":"themeOf","subj":"T9974","obj":"T10073"},{"id":"R8223","pred":"themeOf","subj":"T10008","obj":"T10067"},{"id":"R8224","pred":"themeOf","subj":"T10008","obj":"T10069"},{"id":"R8225","pred":"themeOf","subj":"T10009","obj":"T10068"},{"id":"R8226","pred":"themeOf","subj":"T10009","obj":"T10072"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T8771","span":{"begin":59,"end":69},"obj":"NNS"},{"id":"T8770","span":{"begin":50,"end":58},"obj":"JJ"},{"id":"T8769","span":{"begin":47,"end":49},"obj":"IN"},{"id":"T8768","span":{"begin":42,"end":46},"obj":"NNP"},{"id":"T8767","span":{"begin":38,"end":41},"obj":"CC"},{"id":"T8766","span":{"begin":36,"end":37},"obj":","},{"id":"T8765","span":{"begin":32,"end":36},"obj":"NNP"},{"id":"T8764","span":{"begin":30,"end":31},"obj":","},{"id":"T8763","span":{"begin":25,"end":30},"obj":"NNP"},{"id":"T8762","span":{"begin":23,"end":24},"obj":","},{"id":"T8761","span":{"begin":18,"end":23},"obj":"NNP"},{"id":"T8760","span":{"begin":15,"end":17},"obj":"IN"},{"id":"T8759","span":{"begin":0,"end":14},"obj":"NN"}],"relations":[{"id":"R7091","pred":"conj","subj":"T8763","obj":"T8761"},{"id":"R7092","pred":"punct","subj":"T8764","obj":"T8763"},{"id":"R7093","pred":"conj","subj":"T8765","obj":"T8763"},{"id":"R7094","pred":"punct","subj":"T8766","obj":"T8765"},{"id":"R7095","pred":"cc","subj":"T8767","obj":"T8765"},{"id":"R7096","pred":"conj","subj":"T8768","obj":"T8765"},{"id":"R7098","pred":"amod","subj":"T8770","obj":"T8771"},{"id":"R7099","pred":"pobj","subj":"T8771","obj":"T8769"},{"id":"R7088","pred":"prep","subj":"T8760","obj":"T8759"},{"id":"R7089","pred":"pobj","subj":"T8761","obj":"T8760"},{"id":"R7090","pred":"punct","subj":"T8762","obj":"T8761"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T8545","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T8544","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T8543","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T8542","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T8541","span":{"begin":0,"end":14},"obj":"Gene_expression"},{"id":"T8540","span":{"begin":0,"end":14},"obj":"Gene_expression"},{"id":"T8539","span":{"begin":0,"end":14},"obj":"Gene_expression"},{"id":"T8538","span":{"begin":0,"end":14},"obj":"Gene_expression"},{"id":"T8537","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T8536","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T8535","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T8534","span":{"begin":18,"end":23},"obj":"Protein"}],"relations":[{"id":"R6932","pred":"themeOf","subj":"T8534","obj":"T8538"},{"id":"R6933","pred":"themeOf","subj":"T8535","obj":"T8539"},{"id":"R6934","pred":"themeOf","subj":"T8536","obj":"T8540"},{"id":"R6935","pred":"themeOf","subj":"T8537","obj":"T8541"},{"id":"R6936","pred":"themeOf","subj":"T8538","obj":"T8542"},{"id":"R6939","pred":"themeOf","subj":"T8539","obj":"T8543"},{"id":"R6942","pred":"themeOf","subj":"T8540","obj":"T8544"},{"id":"R6945","pred":"themeOf","subj":"T8541","obj":"T8545"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    testone

    {"project":"testone","denotations":[{"id":"T7082","span":{"begin":0,"end":14},"obj":"Positive_regulation"},{"id":"T7054","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T7053","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T7052","span":{"begin":25,"end":30},"obj":"Protein"}],"relations":[{"id":"R5810","pred":"themeOf","subj":"T7052","obj":"T7082"},{"id":"R5811","pred":"themeOf","subj":"T7053","obj":"T7082"},{"id":"R5812","pred":"themeOf","subj":"T7054","obj":"T7082"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}

    test3

    {"project":"test3","denotations":[{"id":"T7110","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T7109","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T7108","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T7140","span":{"begin":42,"end":46},"obj":"Protein"},{"id":"T7139","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T7138","span":{"begin":25,"end":30},"obj":"Protein"},{"id":"T7137","span":{"begin":0,"end":14},"obj":"Positive_regulation"}],"relations":[{"id":"R5834","pred":"themeOf","subj":"T7138","obj":"T7137"},{"id":"R5836","pred":"themeOf","subj":"T7139","obj":"T7137"},{"id":"R5839","pred":"themeOf","subj":"T7140","obj":"T7137"}],"text":"overexpression of TNF-α, IL-1β, IL-6, and MMP9 in cultured astrocytes"}