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PMC:3312845 / 713-934 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T337 205-212 NN denotes Results
T336 194-202 NN denotes subunits
T335 188-193 NN denotes NF-κB
T334 184-187 CC denotes and
T333 178-183 NN denotes TNF-α
T332 174-177 IN denotes for
T331 166-173 NN denotes studies
T330 146-165 JJ denotes immunohistochemical
T329 142-145 CC denotes and
T328 133-141 NN denotes staining
T327 131-132 NN denotes B
T326 119-130 JJ denotes Fluoro-Jade
T325 109-118 VB denotes performed
T324 106-108 PRP denotes we
T323 104-105 -COMMA- denotes ,
T322 94-104 RB denotes Thereafter
T321 83-92 NN denotes induction
T320 80-82 NN denotes SE
T319 77-79 TO denotes to
T318 71-76 JJ denotes prior
T317 69-70 -RRB- denotes )
T316 61-69 NN denotes sTNFp55R
T315 60-61 -LRB- denotes (
T314 51-59 NN denotes receptor
T313 47-50 NN denotes p55
T312 43-46 NN denotes TNF
T311 35-42 JJ denotes soluble
T310 31-34 CC denotes and
T309 29-30 -COMMA- denotes ,
T308 22-29 NN denotes saline-
T307 17-21 IN denotes with
T306 9-16 VB denotes infused
R138 T306 T307 arg1Of infused,with
R139 T308 T307 arg2Of saline-,with
R142 T310 T309 arg1Of and,","
R143 T314 T310 arg2Of receptor,and
R144 T314 T311 arg1Of receptor,soluble
R145 T314 T312 arg1Of receptor,TNF
R146 T314 T313 arg1Of receptor,p55
R147 T314 T315 arg1Of receptor,(
R148 T314 T318 arg1Of receptor,prior
R149 T316 T315 arg2Of sTNFp55R,(
R150 T317 T315 arg3Of ),(
R151 T318 T319 arg1Of prior,to
R152 T321 T319 arg2Of induction,to
R153 T321 T320 arg1Of induction,SE
R154 T324 T325 arg1Of we,performed
R155 T325 T322 arg1Of performed,Thereafter
R156 T325 T323 arg1Of performed,","
R157 T328 T326 arg1Of staining,Fluoro-Jade
R158 T328 T327 arg1Of staining,B
R159 T328 T329 arg1Of staining,and
R160 T329 T325 arg2Of and,performed
R161 T329 T332 arg1Of and,for
R162 T331 T329 arg2Of studies,and
R163 T331 T330 arg1Of studies,immunohistochemical
R164 T333 T334 arg1Of TNF-α,and
R165 T335 T334 arg2Of NF-κB,and
R166 T336 T332 arg2Of subunits,for
R167 T336 T333 arg1Of subunits,TNF-α
R168 T336 T335 arg1Of subunits,NF-κB

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T148 43-59 Protein denotes TNF p55 receptor
T149 62-69 Protein denotes TNFp55R
T150 178-183 Protein denotes TNF-α

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T478 47-50 http://www.uniprot.org/uniprot/P01589 denotes p55
T467 43-46 http://www.uniprot.org/uniprot/P01375 denotes TNF
T468 178-181 http://www.uniprot.org/uniprot/P01375 denotes TNF
T474 178-183 http://www.uniprot.org/uniprot/P01375 denotes TNF-α

sentences

Id Subject Object Predicate Lexical cue
T109 205-212 Sentence denotes Results
T108 94-203 Sentence denotes Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits.
T8 94-203 Sentence denotes Thereafter, we performed Fluoro-Jade B staining and immunohistochemical studies for TNF-α and NF-κB subunits.
T9 205-212 Sentence denotes Results

simple1

Id Subject Object Predicate Lexical cue
T190 178-183 Protein denotes TNF-α
T189 62-69 Protein denotes TNFp55R
T188 43-59 Protein denotes TNF p55 receptor

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T912 43-59 Protein denotes TNF p55 receptor
T913 62-69 Protein denotes TNFp55R
T914 178-183 Protein denotes TNF-α

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T755 178-183 Protein denotes TNF-α
T754 62-69 Protein denotes TNFp55R
T753 43-59 Protein denotes TNF p55 receptor

DLUT931

Id Subject Object Predicate Lexical cue
T795 43-59 Protein denotes TNF p55 receptor
T796 62-69 Protein denotes TNFp55R
T797 178-183 Protein denotes TNF-α

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T979 119-130 Entity denotes Fluoro-Jade
T977 126-130 Protein denotes Jade
T971 35-70 Protein denotes soluble TNF p55 receptor (sTNFp55R)
T965 62-65 Protein denotes TNF
T942 61-69 Entity denotes sTNFp55R
T944 119-130 Entity denotes Fluoro-Jade
T950 80-82 Entity denotes SE
T954 178-183 Protein denotes TNF-α
T957 188-193 Protein denotes NF-κB

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T622 205-212 NNS denotes Results
T621 202-203 . denotes .
T620 194-202 NNS denotes subunits
T619 188-193 NNP denotes NF-κB
T618 184-187 CC denotes and
T617 178-183 NNP denotes TNF-α
T616 174-177 IN denotes for
T615 166-173 NNS denotes studies
T614 146-165 JJ denotes immunohistochemical
T613 142-145 CC denotes and
T612 133-141 VBG denotes staining
T611 131-132 NNP denotes B
T610 119-130 NNP denotes Fluoro-Jade
T609 109-118 VBD denotes performed
T608 106-108 PRP denotes we
T607 104-105 , denotes ,
T606 94-104 RB denotes Thereafter
T605 92-93 . denotes .
T604 83-92 NN denotes induction
T603 80-82 VB denotes SE
T602 77-79 TO denotes to
T601 71-76 RB denotes prior
T600 69-70 -RRB- denotes )
T599 61-69 JJ denotes sTNFp55R
T598 60-61 -LRB- denotes (
T597 51-59 NN denotes receptor
T596 47-50 NN denotes p55
T595 43-46 NNP denotes TNF
T594 35-42 JJ denotes soluble
T593 31-34 CC denotes and
T592 29-30 , denotes ,
T591 28-29 : denotes -
T590 22-28 NN denotes saline
T589 17-21 IN denotes with
T588 9-16 VBN denotes infused
R395 T589 T588 prep with,infused
R396 T590 T589 pobj saline,with
R397 T591 T590 punct -,saline
R398 T592 T590 punct ",",saline
R399 T593 T590 cc and,saline
R400 T594 T590 conj soluble,saline
R401 T595 T597 nmod TNF,receptor
R402 T596 T597 compound p55,receptor
R403 T597 T590 conj receptor,saline
R404 T598 T597 punct (,receptor
R405 T599 T597 appos sTNFp55R,receptor
R406 T600 T597 punct ),receptor
R407 T601 T588 advmod prior,infused
R408 T602 T601 prep to,prior
R409 T603 T604 compound SE,induction
R410 T604 T602 pobj induction,to
R412 T606 T609 advmod Thereafter,performed
R413 T607 T609 punct ",",performed
R414 T608 T609 nsubj we,performed
R415 T609 T609 ROOT performed,performed
R416 T610 T611 compound Fluoro-Jade,B
R417 T611 T609 dobj B,performed
R418 T612 T609 prep staining,performed
R419 T613 T612 cc and,staining
R420 T614 T615 amod immunohistochemical,studies
R421 T615 T612 conj studies,staining
R422 T616 T615 prep for,studies
R423 T617 T620 nmod TNF-α,subunits
R424 T618 T617 cc and,TNF-α
R425 T619 T617 conj NF-κB,TNF-α
R426 T620 T616 pobj subunits,for
R427 T621 T609 punct .,performed
R428 T622 T622 ROOT Results,Results

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T850 188-202 Protein denotes NF-κB subunits
T849 178-183 Protein denotes TNF-α
T847 43-59 Protein denotes TNF p55 receptor
T848 61-69 Protein denotes sTNFp55R

testone

Id Subject Object Predicate Lexical cue
T20 43-59 Protein denotes TNF p55 receptor
T21 62-69 Protein denotes TNFp55R
T22 178-183 Protein denotes TNF-α
T38 83-92 Positive_regulation denotes induction
T39 133-141 Gene_expression denotes staining
R3 T20 T38 themeOf TNF p55 receptor,induction

test3

Id Subject Object Predicate Lexical cue
T74 178-183 Protein denotes TNF-α
T73 83-92 Positive_regulation denotes induction
T72 61-69 Protein denotes sTNFp55R
T71 43-59 Protein denotes TNF p55 receptor
T52 43-59 Protein denotes TNF p55 receptor
T53 62-69 Protein denotes TNFp55R
T54 178-183 Protein denotes TNF-α
R20 T71 T73 themeOf TNF p55 receptor,induction
R21 T72 T71 equivalentTo sTNFp55R,TNF p55 receptor